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README.md

Jupyter OMERO/Fiji/Napari Desktop

Binder

Run OMERO clients and Napari in a Linux desktop using Jupyter.

This is based on https://github.com/ryanlovett/nbnovnc

Either run on mybinder.org or build locally with repo2docker:

repo2docker .

Open the displayed URL, then go to /desktop e.g. http://localhost:8888/desktop and if you're lucky you'll see a Linux desktop with icons for OMERO.insight and FIJI.

Once the desktop is open go back to the main Jupyter Notebook window, open napari.ipynb and execute the cells one at a time. You should see Napari open in the desktop window.