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gnu: Add r-cummerbund.

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* gnu/packages/bioconductor.scm (r-cummerbund): New variable.
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Roel Janssen 2020-04-27 11:46:08 +02:00
parent 91370829f4
commit 06fc1a5142
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gnu/packages/bioconductor.scm
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@ -1096,6 +1096,36 @@ experiment types where it is important to have a framework in order to inspect
how the coverage distributed across the genome.")
(license license:artistic2.0)))
(define-public r-cummerbund
(package
(name "r-cummerbund")
(version "2.28.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "cummeRbund" version))
(sha256
(base32
"1fjc3bcclm4gsvw4nq6cv3a1kbrldvrxbkyfb9306708si1n4dwk"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-fastcluster", r-fastcluster)
("r-ggplot2" ,r-ggplot2)
("r-gviz" ,r-gviz)
("r-plyr" ,r-plyr)
("r-reshape2" ,r-reshape2)
("r-rsqlite" ,r-rsqlite)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)))
(home-page "https://bioconductor.org/packages/cummeRbund/")
(synopsis "Analyze Cufflinks high-throughput sequencing data")
(description "This package allows for persistent storage, access,
exploration, and manipulation of Cufflinks high-throughput sequencing
data. In addition, provides numerous plotting functions for commonly
used visualizations.")
(license license:artistic2.0)))
(define-public r-curatedtcgadata
(package
(name "r-curatedtcgadata")