3
5
Fork 0
mirror of git://git.savannah.gnu.org/guix.git synced 2023-12-14 03:33:07 +01:00

gnu: Add r-msnbase.

* gnu/packages/bioinformatics.scm (r-msnbase): New variable.
This commit is contained in:
Ricardo Wurmus 2017-01-16 12:21:21 +01:00
parent 6a67e181ac
commit 11879284cb
No known key found for this signature in database
GPG key ID: 197A5888235FACAC

View file

@ -8422,3 +8422,44 @@ accurate missing value estimation. A set of methods for printing and plotting
the results is also provided. All PCA methods make use of the same data
structure (pcaRes) to provide a common interface to the PCA results.")
(license license:gpl3+)))
(define-public r-msnbase
(package
(name "r-msnbase")
(version "2.0.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "MSnbase" version))
(sha256
(base32
"0jjjs29dcwsjaxzfqxy98ycpg3rwxzzchkj77my3cjgdc00sm66n"))))
(properties `((upstream-name . "MSnbase")))
(build-system r-build-system)
(propagated-inputs
`(("r-affy" ,r-affy)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-biocparallel" ,r-biocparallel)
("r-digest" ,r-digest)
("r-ggplot2" ,r-ggplot2)
("r-impute" ,r-impute)
("r-iranges" ,r-iranges)
("r-maldiquant" ,r-maldiquant)
("r-mzid" ,r-mzid)
("r-mzr" ,r-mzr)
("r-pcamethods" ,r-pcamethods)
("r-plyr" ,r-plyr)
("r-preprocesscore" ,r-preprocesscore)
("r-protgenerics" ,r-protgenerics)
("r-rcpp" ,r-rcpp)
("r-reshape2" ,r-reshape2)
("r-s4vectors" ,r-s4vectors)
("r-vsn" ,r-vsn)
("r-xml" ,r-xml)))
(home-page "https://github.com/lgatto/MSnbase")
(synopsis "Base functions and classes for MS-based proteomics")
(description
"This package provides basic plotting, data manipulation and processing
of MS-based proteomics data.")
(license license:artistic2.0)))