gnu: Add r-derfinderhelper.

* gnu/packages/bioconductor.scm (r-derfinderhelper): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
This commit is contained in:
zimoun 2021-11-26 13:41:54 +01:00 committed by Ludovic Courtès
parent d19aff9339
commit 128fd2ab59
No known key found for this signature in database
GPG Key ID: 090B11993D9AEBB5
1 changed files with 27 additions and 0 deletions

View File

@ -1610,6 +1610,33 @@ array-like objects like @code{DataFrame} objects (typically with Rle columns),
@code{Matrix} objects, and ordinary arrays and data frames.")
(license license:artistic2.0)))
(define-public r-derfinderhelper
(package
(name "r-derfinderhelper")
(version "1.28.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "derfinderHelper" version))
(sha256
(base32 "06x0wy2wzpngak1pnrj2p0xzlx1nbcz0hs3p9q5ic6ib2rgwrh35"))))
(properties `((upstream-name . "derfinderHelper")))
(build-system r-build-system)
(propagated-inputs
`(("r-iranges" ,r-iranges)
("r-matrix" ,r-matrix)
("r-s4vectors" ,r-s4vectors)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/leekgroup/derfinderHelper")
(synopsis "Helper for derfinder")
(description
"This package speeds up the derfinder package when using multiple cores.
It is particularly useful when using BiocParallel and it helps reduce the time
spent loading the full derfinder package when running the F-statistics
calculation in parallel.")
(license license:artistic2.0)))
(define-public r-bluster
(package
(name "r-bluster")