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gnu: flexbar: Enable tests.

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* gnu/packages/bioinformatics.scm (flexbar): Enable tests.
This commit is contained in:
Ricardo Wurmus 2015-04-27 11:48:00 +02:00
parent 02ed8be3ac
commit 4ca009c036
1 changed files with 10 additions and 5 deletions
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15
gnu/packages/bioinformatics.scm
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@ -623,15 +623,20 @@ results. The FASTX-Toolkit tools perform some of these preprocessing tasks.")
"13jaykc3y1x8y5nn9j8ljnb79s5y51kyxz46hdmvvjj6qhyympmf"))))
(build-system cmake-build-system)
(arguments
`(;; There is no test target, although there is a directory containing
;; test data and scripts (launched by flexbar_validate.sh).
#:tests? #f
#:configure-flags (list
`(#:configure-flags (list
(string-append "-DFLEXBAR_BINARY_DIR="
(assoc-ref %outputs "out")
"/bin/"))
#:phases
(alist-delete 'install %standard-phases)))
(alist-replace
'check
(lambda* (#:key outputs #:allow-other-keys)
(setenv "PATH" (string-append
(assoc-ref outputs "out") "/bin:"
(getenv "PATH")))
(chdir "../flexbar_v2.5_src/test")
(zero? (system* "bash" "flexbar_validate.sh")))
(alist-delete 'install %standard-phases))))
(inputs
`(("tbb" ,tbb)
("zlib" ,zlib)))