guix/guix
3
5
Fork 0
mirror of git://git.savannah.gnu.org/guix.git synced 2023-12-14 03:33:07 +01:00
Code Issues Releases Wiki Activity

gnu: gess: Use WRAP-SCRIPT.

Browse source 
* gnu/packages/bioinformatics.scm (gess)[arguments]: Use WRAP-SCRIPT.
[inputs]: Add guile-3.0 for wrapper.
This commit is contained in:
Ricardo Wurmus 2020-03-03 11:32:47 +01:00
parent 9309fe355e
commit 4d5d07f75c
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 3 additions and 2 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

5
gnu/packages/bioinformatics.scm
View file

@ -11089,7 +11089,7 @@ import matplotlib
matplotlib.use('Agg')
" line)))
;; Make sure GESS has all modules in its path
(wrap-program (string-append target "GESS.py")
(wrap-script (string-append target "GESS.py")
`("PYTHONPATH" ":" = (,target ,(getenv "PYTHONPATH"))))
(mkdir-p bin)
(symlink (string-append target "GESS.py")
@ -11101,7 +11101,8 @@ matplotlib.use('Agg')
("python2-scipy" ,python2-scipy)
("python2-numpy" ,python2-numpy)
("python2-networkx" ,python2-networkx)
("python2-biopython" ,python2-biopython)))
("python2-biopython" ,python2-biopython)
("guile" ,guile-3.0))) ; for the script wrapper
(home-page "https://compbio.uthscsa.edu/GESS_Web/")
(synopsis "Detect exon-skipping events from raw RNA-seq data")
(description