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gnu: Remove r-loomr.

The loomR package is actually non-free software according to its author.  See
https://github.com/mojaveazure/loomR/pull/24.

* gnu/packages/bioinformatics.scm (r-loomr): Remove variable.
This commit is contained in:
Ricardo Wurmus 2019-06-14 17:26:27 +02:00
parent f063f0efeb
commit bc70516bba
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@ -13086,35 +13086,6 @@ known and yet unknown splice junctions. Circular-to-linear ratios of circRNAs
can be calculated, and a number of descriptive plots easily generated.")
(license license:artistic2.0)))
(define-public r-loomr
(let ((commit "df0144bd2bbceca6fadef9edc1bbc5ca672d4739")
(revision "1"))
(package
(name "r-loomr")
(version (git-version "0.2.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mojaveazure/loomR.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1b1g4dlmfdyhn56bz1mkh9ymirri43wiz7rjhs7py3y7bdw1s3yr"))))
(build-system r-build-system)
(propagated-inputs
`(("r-r6" ,r-r6)
("r-hdf5r" ,r-hdf5r)
("r-iterators" ,r-iterators)
("r-itertools" ,r-itertools)
("r-matrix" ,r-matrix)))
(home-page "https://github.com/mojaveazure/loomR")
(synopsis "R interface for loom files")
(description "This package provides an R interface to access, create,
and modify loom files. loomR aims to be completely compatible with loompy.")
(license license:gpl3))))
(define-public gffread
;; We cannot use the tagged release because it is not in sync with gclib.
;; See https://github.com/gpertea/gffread/issues/26