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682 commits

Author SHA1 Message Date
Marius Bakke
23bc9a3586
gnu: python-joblib: Update to 0.14.1. 
* gnu/packages/python-xyz.scm (python-joblib): Update to 0.14.1.
 2020-03-15 15:09:07 +01:00
Marius Bakke
5a9980d55e
gnu: python-networkx: Update to 2.4. 
* gnu/packages/python-xyz.scm (python-networkx): Update to 2.4.
[source](uri): Download tarball instead of zipball.
[arguments]: New field.
[native-inputs]: Remove PYTHON-NOSE and UNZIP.  Add PYTHON-PYTEST.
[properties]: New field.
(python2-networkx): Stick with version 2.2.
 2020-03-15 15:09:06 +01:00
Marius Bakke
c19930dc6b
gnu: python-pyrsistent: Update to 0.15.7. 
* gnu/packages/python-xyz.scm (python-pyrsistent): Update to 0.15.7.
 2020-03-15 15:09:06 +01:00
Marius Bakke
bb4674b43f
Merge branch 'master' into staging 2020-03-14 01:42:02 +01:00
Efraim Flashner
b0aa58d8f1
gnu: python2-jupyter-console: Build with python2. 
* gnu/packages/python-xyz.scm (python2-jupyter-console)[arguments]: Add
python keyword, set to python-2.
 2020-03-12 15:34:28 +02:00
Efraim Flashner
e8588a7847
gnu: python-jupyter-console: Specify python2 variant. 
* gnu/packages/python-xyz.scm (python-jupyter-console)[properties]: New
field. Specify python2-jupyter-console as python2 variant.
 2020-03-12 15:34:27 +02:00
Efraim Flashner
d8ba1135eb
gnu: python2-ipython: Fix build. 
* gnu/packages/python-xyz.scm (python2-ipython)[arguments]: Adjust
skipped tests.
 2020-03-12 10:25:42 +02:00
Marius Bakke
41c6e4f2b4
Merge branch 'master' into staging 2020-03-11 22:58:11 +01:00
Marius Bakke
58363ee500
gnu: Remove year range from copyright header. 
* gnu/packages/python-xyz.scm: List years explicitly instead of range in
copyright line.
 2020-03-11 22:56:51 +01:00
Marius Bakke
0a8655e6dc
gnu: Remove duplicate copyright line. 
* gnu/packages/python-xyz.scm: Remove duplicate copyright.
 2020-03-11 22:56:27 +01:00
Marius Bakke
6bd7d4cb74
gnu: python2-radon: Fix build. 
* gnu/packages/python-xyz.scm (python-radon)[properties]: New field.
* gnu/packages/python-xyz.scm (python2-radon)[propagated-inputs]: Add
PYTHON2-CONFIGPARSER and PYTHON2-FUTURE.
 2020-03-11 22:43:45 +01:00
Marius Bakke
6006727974
gnu: python-virtualenv: Update to 20.0.10. 
* gnu/packages/python-xyz.scm (python-virtualenv): Update to 20.0.10.
 2020-03-11 22:43:44 +01:00
Marius Bakke
7815afc958
gnu: python2-virtualenv: Fix build. 
* gnu/packages/python-xyz.scm (python-virtualenv)[properties]: New field.
(python2-virtualenv)[propagated-inputs]: Add PYTHON2-CONTEXTLIB2.
[arguments]: New field.
 2020-03-11 22:43:44 +01:00
Marius Bakke
ebd4c25178
gnu: python-contextlib2: Update to 0.6.0.post1. 
* gnu/packages/python-xyz.scm (python-contextlib2): Update to 0.6.0.post1.
 2020-03-11 22:43:44 +01:00
Marius Bakke
1ed3b845f7
gnu: python-multidict: Update to 4.7.5. 
* gnu/packages/python-xyz.scm (python-multidict): Update to 4.7.5.
[arguments]: New field.
[native-inputs]: Remove PYTHON-PYTEST-RUNNER.  Add PYTHON-PYTEST-COV.
 2020-03-11 18:56:46 +01:00
Marius Bakke
4510aeb91c
gnu: python2-sphinx: Build with python-docutils@0.14. 
* gnu/packages/python-xyz.scm (python2-docutils-0.14): New public variable.
* gnu/packages/sphinx.scm (python2-sphinx)[propagated-inputs]: Change from
PYTHON2-DOCUTILS to PYTHON2-DOCUTILS-0.14.
 2020-03-11 17:46:04 +01:00
Efraim Flashner
578e4cf465
gnu: python2-ipykernel: Downgrade to 4.10.1. 
This is the last version actually supported by ipykernel.

* gnu/packages/python-xyz.scm (python2-ipython): Downgrade to 4.10.1.
[arguments]: Remove custom 'check phase.
[propagated-inputs]: Add python2-tornado, python2-traitlets.
[native-inputs]: Add python2-mock, python2-pytest-cov.
(python-ipykernel)[properties): Declare python2-ipykernel as the
python2- variant.
 2020-03-11 15:19:54 +02:00
Efraim Flashner
2bc5d5d57e
gnu: python-ipython: Declare python2 variant. 
* gnu/packages/python-xyz.scm (python-ipython)[properties]: Declare
python2-ipython as the python2- variant.
 2020-03-11 15:07:27 +02:00
Tobias Geerinckx-Rice
2d3da18613
gnu: python-tomlkit: Fix typos in descriptions. 
* gnu/packages/python-xyz.scm (python-tomlkit)[synopsis, description]:
Fix typos.
 2020-03-11 03:01:45 +01:00
Tobias Geerinckx-Rice
f4b6ce2155
gnu: python-tomlkit: Update to 0.5.11. 
* gnu/packages/python-xyz.scm (python-tomlkit): Update to 0.5.11.
 2020-03-11 03:01:44 +01:00
Marius Bakke
2d421c4f19
Merge branch 'master' into staging 2020-03-10 20:45:24 +01:00
Tobias Geerinckx-Rice
828996bb8a
gnu: python-virtualenv: Propagate inputs. 
* gnu/packages/python-xyz.scm (python-virtualenv)[inputs]: Make…
[propagated-inputs]: …this.
 2020-03-10 12:06:50 +01:00
Marius Bakke
b3b5714fa7
Merge branch 'master' into staging 2020-03-09 21:45:32 +01:00
Roel Janssen
b4e1ca0675
gnu: python-semver: Fix build. 
* gnu/packages/python-xyz.scm: Add python-appdirs, python-distlib,
  python-importlib-metadata, python-filelock, and python-six to native-inputs
  in order to run the test suite.
 2020-03-09 14:50:35 +01:00
Jakub Kądziołka
94d57ba339
gnu: python-virtualenv: Update to 20.0.8. 
* gnu/packages/python-xyz.scm (python-virtualenv): Update to 20.0.8.
  [arguments]: Remove the now-redundant 'disable-failing-test phase.
  [native-inputs]: Add python-setuptools and python-setuptools-scm.
  [inputs]: Add python-{appdirs, distlib, filelock, six,
  importlib-metadata}.
 2020-03-09 00:20:49 +01:00
Jakub Kądziołka
6e79208954
gnu: python-xyz: Add python-filelock. 
* gnu/packages/python-xyz.scm (python-filelock): New variable.
 2020-03-09 00:20:47 +01:00
Jakub Kądziołka
f2a6483084
gnu: python-xyz: Add python-distlib. 
* gnu/packages/python-xyz.scm (python-distlib): New variable.
 2020-03-09 00:20:46 +01:00
Tobias Geerinckx-Rice
14a5146f3a
gnu: python-execnet: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-execnet)[home-page]: Use HTTPS.
 2020-03-07 12:48:18 +01:00
Marius Bakke
7154f5ef4b
gnu: python-pygit2: Update to 1.1.0. 
* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.1.0.
[propagated-inputs]: Remove PYTHON-SIX and PYTHON-TOX.  Add PYTHON-CACHED-PROPERTY.
(python2-pygit2): Remove variable (Python 2 is no longer supported).
 2020-03-06 12:31:08 +01:00
Ricardo Wurmus
053ab825be
gnu: Add python-legacy-api-wrap. 
* gnu/packages/python-xyz.scm (python-legacy-api-wrap): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus
2ceff35f07
gnu: Add python-get-version. 
* gnu/packages/python-xyz.scm (python-get-version): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus
cc2c2850ce
gnu: Add python-pytest-black. 
* gnu/packages/python-xyz.scm (python-pytest-black): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus
5f603fab23
gnu: python-black: Update to 19.10b0. 
* gnu/packages/python-xyz.scm (python-black): Update to 19.10b0.
[arguments]: Patch tests.
[propagated-inputs]: Add python-pathspec, python-regex, and python-typed-ast.
[native-inputs]: Add python-setuptools-scm.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus
c777ecb372
gnu: Add python-pathspec. 
* gnu/packages/python-xyz.scm (python-pathspec): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus
538c1a024a
gnu: python-tables: Use later hdf5 version. 
* gnu/packages/python-xyz.scm (python-tables)[inputs]: Replace hdf5 with
hdf5-1.10.
 2020-03-06 09:16:47 +01:00
Ricardo Wurmus
70b74663b6
gnu: python-tables: Do not detect CPU features. 
* gnu/packages/python-xyz.scm (python-tables)[arguments]: Add phase
"disable-tuning".
 2020-03-06 09:16:47 +01:00
Marius Bakke
b6f946f039
Merge branch 'master' into staging 2020-03-06 00:17:50 +01:00
Ricardo Wurmus
a098b34980
gnu: python-anndata: Update to 0.7.1. 
* gnu/packages/python-xyz.scm (python-anndata): Update to 0.7.1.
[arguments]: Move check phase after install phase; delete one test.
[propagated-inputs]: Add python-importlib-metadata, python-numcodecs,
python-packaging, and python-zarr.
[native-inputs]: Add python-joblib, python-pytest, and python-setuptools-scm.
 2020-03-05 21:46:12 +01:00
Ricardo Wurmus
7032c1cc60
gnu: Add python-zarr. 
* gnu/packages/python-xyz.scm (python-zarr): New variable.
 2020-03-05 21:46:05 +01:00
Ricardo Wurmus
8e04b233f1
gnu: Add python-asciitree. 
* gnu/packages/python-xyz.scm (python-asciitree): New variable.
 2020-03-05 21:45:55 +01:00
Ricardo Wurmus
241409cd8a
gnu: Add python-numcodecs. 
* gnu/packages/python-xyz.scm (python-numcodecs): New variable.
 2020-03-05 21:45:46 +01:00
Ricardo Wurmus
24ce64216e
gnu: python-h5py: Update to 2.10.0. 
* gnu/packages/python-xyz.scm (python-h5py): Update to 2.10.0.
[inputs]: Use hdf5-1.10.
[native-inputs]: Add pkg-config.
 2020-03-05 21:45:14 +01:00
Tobias Geerinckx-Rice
e85af13724
gnu: Update pypi.python.org home pages & use HTTPS. 
* gnu/packages/check.scm (python-unittest2, python-pytest-localserver)
(python-discover)[home-page]: Follow (HTTPS) redirections.
* gnu/packages/fontutils.scm (python2-defcon)[home-page]: Likewise.
* gnu/packages/glib.scm (python2-pygobject-2)[home-page]: Likewise.
* gnu/packages/graph.scm (python-igraph)[home-page]: Likewise.
* gnu/packages/graphviz.scm (xdot)[home-page]: Likewise.
* gnu/packages/pdf.scm (python-poppler-qt5)[home-page]: Likewise.
* gnu/packages/python-web.scm (python-zope-event, python-zope-testing)
(python-zope-testrunner, python-zope-i18nmessageid, python-zope-schema)
(python-zope-configuration, python-zope-proxy, python-zope-location)
(python-zope-security))[home-page]: Likewise.
* gnu/packages/python-xyz.scm (python-setuptools,python-six)
(python2-dogtail, python2-enum, python-enum34, python-unidecode)
(python-numpydoc, python-decorator, python-drmaa, python-pathlib2)
(python-ly, python-msgpack, python-termcolor, python-colorama)
(python-pluggy, python2-pathlib2, python-rfc3987)[home-page]: Likewise.
 2020-03-04 21:30:57 +01:00
Tobias Geerinckx-Rice
b5544cb4d4
gnu: python-invoke: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-invoke)[home-page]: Use HTTPS.
 2020-03-04 20:59:52 +01:00
Tobias Geerinckx-Rice
58d4e9498f
gnu: python-pbr: Update home page. 
* gnu/packages/python-xyz.scm (python-pbr)[home-page]: Follow (HTTPS)
redirection.
 2020-03-04 20:59:52 +01:00
Tobias Geerinckx-Rice
7509f34fab
gnu: python-pyyaml: Update home page. 
* gnu/packages/python-xyz.scm (python-pyyaml)[home-page]: Link to
the (HTTPS) front page.
 2020-03-04 20:59:52 +01:00
Marius Bakke
e32aea5472
Merge branch 'master' into staging 2020-03-04 12:04:42 +01:00
Tobias Geerinckx-Rice
a0fdade220
gnu: python-contextlib2: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-contextlib2)[home-page]: Use HTTPS.
 2020-03-03 05:06:48 +01:00
Tobias Geerinckx-Rice
fd3ae040cf
gnu: python-gipc: Use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-gipc)[home-page]: Use HTTPS.
 2020-03-03 05:06:47 +01:00
Tobias Geerinckx-Rice
d3d73bd650
gnu: python-seaborn: Update & use HTTPS home page. 
* gnu/packages/python-xyz.scm (python-seaborn)[home-page]: Follow
redirection, but use HTTPS.
 2020-03-03 05:06:47 +01:00