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Author SHA1 Message Date
Ricardo Wurmus
8e92a17431
gnu: Add texlive-ifoddpage. 
* gnu/packages/tex.scm (texlive-ifoddpage): New variable.
 2021-05-04 15:17:17 +02:00
Ricardo Wurmus
3c51abe059
gnu: Add texlive-titling. 
* gnu/packages/tex.scm (texlive-titling): New variable.
 2021-05-04 15:17:17 +02:00
Guillaume Le Vaillant
7ca996c3f5
gnu: sbcl-trivial-backtrace: Move lift to native-inputs. 
* gnu/packages/lisp-xyz.scm (sbcl-trivial-backtrace)[inputs]: Move lift to...
  [native-inputs]: ... here.
 2021-05-04 13:58:31 +02:00
Sharlatan Hellseher
4c2f810f97
gnu: sbcl-trivial-backtrace: Update to 1.1.0-1.6eb65bd 
* gnu/packages/lisp-xyz.scm (sbcl-trivial-backtrace): Update
  to 1.1.0-1.6eb65bd.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-04 13:53:03 +02:00
Sharlatan Hellseher
f46b6d6487
gnu: sbcl-static-dispatch: Update to 0.5. 
* gnu/packages/lisp-xyz.scm (sbcl-static-dispatch): Update to 0.5.
  [version]: Use annotated tag of the latest release in upstream.
  [native-inputs]: Remove prove, add fiveam.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-04 13:43:02 +02:00
Sharlatan Hellseher
36d4877041
gnu: sbcl-cl-environments: Update to 0.4. 
* gnu/package/lisp-xyz.scm (sbcl-cl-environments): Update to 0.4.
  [version]: Use annotated tag instead of direct commit, there are
  upstream releases available now.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-04 13:36:55 +02:00
Ricardo Wurmus
7694acebd1
gnu: r-summarizedexperiment: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Move variable from here...
* gnu/packages/bioconductor.scm (r-summarizedexperiment): ...to here.
 2021-05-04 10:11:34 +02:00
Ricardo Wurmus
b602ec9fba
gnu: r-mixomics: Update to 6.14.1. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.14.1.
[propagated-inputs]: Add r-biocparallel.
 2021-05-04 09:47:37 +02:00
Ricardo Wurmus
4286233e77
gnu: r-catalyst: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.14.1.
 2021-05-04 09:47:37 +02:00
Ricardo Wurmus
2191a414ea
gnu: r-scran: Update to 1.18.7. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.7.
 2021-05-04 09:47:37 +02:00
Ricardo Wurmus
3c59d34107
gnu: r-biocpkgtools: Update to 1.8.2. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.2.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
b75b3ba2c7
gnu: r-experimenthub: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.16.1.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
c1942727cf
gnu: r-bioassayr: Update to 1.28.3. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.3.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
5bd5f755f2
gnu: r-universalmotif: Update to 1.8.5. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.5.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
b410f072b5
gnu: r-icobra: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.1.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
b2bdc2f130
gnu: r-interactionset: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.18.1.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
390098ddd4
gnu: r-systempiper: Update to 1.24.6. 
* gnu/packages/bioconductor.scm (r-systempiper): Update to 1.24.6.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
fc1aef2ccd
gnu: r-genomeinfodb: Update to 1.26.7. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.7.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
8bd3170bcf
gnu: r-biocgenerics: Update to 0.36.1. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.1.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
d4051161e7
gnu: r-ensembldb: Update to 2.14.1. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.14.1.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
7072dc8c53
gnu: r-gage: Update to 2.40.2. 
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.40.2.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
3b002a49d4
gnu: r-annotationhub: Update to 2.22.1. 
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.22.1.
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
8ddbf984a2
gnu: r-future-apply: Set HOME directory variable. 
* gnu/packages/cran.scm (r-future-apply)[arguments]: Add phase "set-HOME".
 2021-05-04 09:47:36 +02:00
Ricardo Wurmus
553767d02a
gnu: r-matrixstats: Set HOME directory variable. 
* gnu/packages/statistics.scm (r-matrixstats)[arguments]: Add phase
"set-HOME".
 2021-05-04 09:47:32 +02:00
Hartmut Goebel
ec4012c582
gnu: sequoia: Update to 1.1.0. 
* gnu/packages/sequoia.scm (sequoia): Update to 1.1.0. [arguments]: Remove
  phase "package", add phases "fix-rand-dependency" and "fix-permissions".
 2021-05-04 09:44:14 +02:00
Ricardo Wurmus
fcd002ccfa
gnu: r-pcapp: Update to 1.9-74. 
* gnu/packages/statistics.scm (r-pcapp): Update to 1.9-74.
 2021-05-04 07:27:51 +02:00
Ricardo Wurmus
685f173894
gnu: r-sfsmisc: Update to 1.1-11. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-11.
 2021-05-04 07:27:51 +02:00
Ricardo Wurmus
916477772e
gnu: r-tidyselect: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 1.1.1.
 2021-05-04 07:27:51 +02:00
Ricardo Wurmus
f5335bffe5
gnu: r-viridislite: Update to 0.4.0. 
* gnu/packages/statistics.scm (r-viridislite): Update to 0.4.0.
 2021-05-04 07:27:51 +02:00
Ricardo Wurmus
0ad98a178b
gnu: r-viridis: Update to 0.6.0. 
* gnu/packages/statistics.scm (r-viridis): Update to 0.6.0.
 2021-05-04 07:27:51 +02:00
Ricardo Wurmus
2fbdb15669
gnu: r-r-rsp: Add build phase to set HOME directory. 
* gnu/packages/statistics.scm (r-r-rsp)[arguments]: Add build phase
"set-HOME".
 2021-05-04 07:27:51 +02:00
Ricardo Wurmus
2eab3898e1
gnu: r-r-cache: Update to 0.15.0. 
* gnu/packages/statistics.scm (r-r-cache): Update to 0.15.0.
[arguments]: Add build phase "set-HOME".
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
3ff0d6f797
gnu: r-dt: Update to 0.18. 
* gnu/packages/statistics.scm (r-dt): Update to 0.18.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
45cdf3ad61
gnu: r-segmented: Update to 1.3-4. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.3-4.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
c23b2fac17
gnu: r-rsqlite: Update to 2.2.7. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.7.
[propagated-inputs]: Remove r-bh.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
e94cf411f0
gnu: r-bitops: Update to 1.0-7. 
* gnu/packages/statistics.scm (r-bitops): Update to 1.0-7.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
866646194c
gnu: r-rcpparmadillo: Update to 0.10.4.0.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.4.0.0.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
883eab3ec6
gnu: r-withr: Update to 2.4.2. 
* gnu/packages/statistics.scm (r-withr): Update to 2.4.2.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
8530eaa5d6
gnu: r-devtools: Update to 2.4.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.4.0.
[propagated-inputs]: Remove r-covr and r-dt; add r-fs and r-lifecycle.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
2666871c1b
gnu: r-openssl: Update to 1.4.4. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.4.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
23a4436daf
gnu: r-tibble: Update to 3.1.1. 
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.1.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
5c45c5adfa
gnu: r-rlang: Update to 0.4.11. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.11.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
fe41452faf
gnu: r-knitr: Update to 1.33. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.33.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
dfafea7951
gnu: r-highr: Update to 0.9. 
* gnu/packages/statistics.scm (r-highr): Update to 0.9.
[propagated-inputs]: Add r-xfun.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
d1f236045b
gnu: r-formatr: Update to 1.9. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.9.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
321fc2e752
gnu: r-survival: Update to 3.2-11. 
* gnu/packages/statistics.scm (r-survival): Update to 3.2-11.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
db1323aaa8
gnu: r-spatial: Update to 7.3-14. 
* gnu/packages/statistics.scm (r-spatial): Update to 7.3-14.
 2021-05-04 07:27:50 +02:00
Ricardo Wurmus
9015ae66d3
gnu: r-nnet: Update to 7.3-16. 
* gnu/packages/statistics.scm (r-nnet): Update to 7.3-16.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
88bf883bc5
gnu: r-mgcv: Update to 1.8-35. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-35.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
9042db14b9
gnu: r-lattice: Update to 0.20-44. 
* gnu/packages/statistics.scm (r-lattice): Update to 0.20-44.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
50c7032eef
gnu: r-kernsmooth: Update to 2.23-20. 
* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-20.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
27e873a5e3
gnu: r-cluster: Update to 2.1.2. 
* gnu/packages/statistics.scm (r-cluster): Update to 2.1.2.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
01f58c6270
gnu: r-class: Update to 7.3-19. 
* gnu/packages/statistics.scm (r-class): Update to 7.3-19.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
73efca4064
gnu: r-mass: Update to 7.3-54. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-54.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
3cf8eab28f
gnu: r-boot: Update to 1.3-28. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-28.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
43a2eaad02
gnu: r-mlr3misc: Update to 0.9.1. 
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.9.1.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
065f3eac48
gnu: r-phangorn: Update to 2.7.0. 
* gnu/packages/cran.scm (r-phangorn): Update to 2.7.0.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
9788d909ca
gnu: r-tidymodels: Update to 0.1.3. 
* gnu/packages/cran.scm (r-tidymodels): Update to 0.1.3.
[propagated-inputs]: Remove r-magrittr; add r-conflicted and r-workflowsets.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
039c652a94
gnu: r-tidytext: Update to 0.3.1. 
* gnu/packages/cran.scm (r-tidytext): Update to 0.3.1.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
0a7a9fd6a1
gnu: r-workflowsets: Update to 0.0.2. 
* gnu/packages/cran.scm (r-workflowsets): Update to 0.0.2.
[propagated-inputs]: Add r-generics.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
d14100cfea
gnu: r-tune: Update to 0.1.5. 
* gnu/packages/cran.scm (r-tune): Update to 0.1.5.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
62824117c0
gnu: r-exactranktests: Update to 0.8-32. 
* gnu/packages/cran.scm (r-exactranktests): Update to 0.8-32.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
205a03eb2c
gnu: r-transphylo: Update to 1.4.5. 
* gnu/packages/cran.scm (r-transphylo): Update to 1.4.5.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
7fb817783d
gnu: r-muhaz: Update to 1.2.6.4. 
* gnu/packages/cran.scm (r-muhaz): Update to 1.2.6.4.
 2021-05-04 07:27:49 +02:00
Ricardo Wurmus
278a60cd56
gnu: r-clusterr: Update to 1.2.3. 
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.3.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
81e94675ff
gnu: r-spatstat-core: Update to 2.1-2. 
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.1-2.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
09a0040397
gnu: r-spatstat-geom: Update to 2.1-0. 
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.1-0.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
c5abf83937
gnu: r-lightgbm: Update to 3.2.1. 
* gnu/packages/cran.scm (r-lightgbm): Update to 3.2.1.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
7ac6dd6403
gnu: r-scatterpie: Update to 0.1.6. 
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.6.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
73f7bcf280
gnu: r-bridgesampling: Update to 1.1-2. 
* gnu/packages/cran.scm (r-bridgesampling): Update to 1.1-2.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
d7cdf463e9
gnu: r-keyring: Update to 1.2.0. 
* gnu/packages/cran.scm (r-keyring): Update to 1.2.0.
[propagated-inputs]: Remove r-getpass; add r-askpass.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
df9774306a
gnu: r-rsconnect: Update to 0.8.17. 
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.17.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
6d2b288e24
gnu: r-tam: Update to 3.6-45. 
* gnu/packages/cran.scm (r-tam): Update to 3.6-45.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
2dc5918ef9
gnu: r-bdgraph: Update to 2.64. 
* gnu/packages/cran.scm (r-bdgraph): Update to 2.64.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
094341c4bf
gnu: r-openmx: Update to 2.19.5. 
* gnu/packages/cran.scm (r-openmx): Update to 2.19.5.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
ecba34b7d1
gnu: r-rpf: Update to 1.0.7. 
* gnu/packages/cran.scm (r-rpf): Update to 1.0.7.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
ee70707e99
gnu: r-rsvg: Update to 2.1.2. 
* gnu/packages/cran.scm (r-rsvg): Update to 2.1.2.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
5aa13eeb6d
gnu: r-qqman: Update to 0.1.8. 
* gnu/packages/cran.scm (r-qqman): Update to 0.1.8.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
570a872ad8
gnu: r-anthropometry: Update to 1.15. 
* gnu/packages/cran.scm (r-anthropometry): Update to 1.15.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
9c6148d3e5
gnu: r-adagio: Update to 0.8.4. 
* gnu/packages/cran.scm (r-adagio): Update to 0.8.4.
[propagated-inputs]: Add r-lpsolve.
[native-inputs]: Remove gfortran.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
12d5937160
gnu: r-qgam: Update to 1.3.3. 
* gnu/packages/cran.scm (r-qgam): Update to 1.3.3.
 2021-05-04 07:27:48 +02:00
Ricardo Wurmus
eda03d2462
gnu: r-emojifont: Update to 0.5.5. 
* gnu/packages/cran.scm (r-emojifont): Update to 0.5.5.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
deb085d8bc
gnu: r-parameters: Update to 0.13.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.13.0.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
d25069df0b
gnu: r-terra: Update to 1.2-5. 
* gnu/packages/cran.scm (r-terra): Update to 1.2-5.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
8bf6516ff9
gnu: r-xgboost: Update to 1.4.1.1. 
* gnu/packages/cran.scm (r-xgboost): Update to 1.4.1.1.
[propagated-inputs]: Add r-jsonlite.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
e0121c91fd
gnu: r-ingredients: Update to 2.2.0. 
* gnu/packages/cran.scm (r-ingredients): Update to 2.2.0.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
4cfd543cc1
gnu: r-dqrng: Update to 0.3.0. 
* gnu/packages/cran.scm (r-dqrng): Update to 0.3.0.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
aca781b9a4
gnu: r-clue: Update to 0.3-59. 
* gnu/packages/cran.scm (r-clue): Update to 0.3-59.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
abc63422de
gnu: r-ggplotify: Update to 0.0.6. 
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.6.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
da1f80f1e1
gnu: r-svmisc: Update to 1.1.4. 
* gnu/packages/cran.scm (r-svmisc): Update to 1.1.4.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
5d670caf8f
gnu: r-rjava: Update to 1.0-4. 
* gnu/packages/cran.scm (r-rjava): Update to 1.0-4.
[inputs]: Remove pcre.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
8b5eeb9f96
gnu: r-bookdown: Update to 0.22. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.22.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
bacfd45f67
gnu: r-pegas: Update to 1.0. 
* gnu/packages/cran.scm (r-pegas): Update to 1.0.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
4ab5855f39
gnu: r-rsvd: Update to 1.0.5. 
* gnu/packages/cran.scm (r-rsvd): Update to 1.0.5.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
e2a1a68e60
gnu: r-future: Add build phase to set HOME directory. 
* gnu/packages/cran.scm (r-future)[arguments]: Add build phase "set-HOME".
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
1b7948536b
gnu: r-parallelly: Update to 1.25.0. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.25.0.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
8c89cc7edb
gnu: r-listenv: Add phase to set HOME directory. 
* gnu/packages/cran.scm (r-listenv)[arguments]: Add build phase "set-HOME".
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
2ac230527b
gnu: r-rmpfr: Update to 0.8-4. 
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-4.
 2021-05-04 07:27:47 +02:00
Ricardo Wurmus
81e81183a6
gnu: r-ouch: Update to 2.16. 
* gnu/packages/cran.scm (r-ouch): Update to 2.16.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
fbe71c6c90
gnu: r-rgl: Update to 0.106.8. 
* gnu/packages/cran.scm (r-rgl): Update to 0.106.8.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
75a461aa74
gnu: r-rcppparallel: Update to 5.1.3. 
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.3.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
3dbd04d7ca
gnu: r-gh: Update to 1.3.0. 
* gnu/packages/cran.scm (r-gh): Update to 1.3.0.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
47a15ac7d0
gnu: r-ggeffects: Update to 1.1.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 1.1.0.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
363a669276
gnu: r-performance: Update to 0.7.1. 
* gnu/packages/cran.scm (r-performance): Update to 0.7.1.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
787a0b26e1
gnu: r-bayestestr: Update to 0.9.0. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.9.0.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
da20f1f0b2
gnu: r-tmb: Update to 1.7.20. 
* gnu/packages/cran.scm (r-tmb): Update to 1.7.20.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
3e4baacd91
gnu: r-emmeans: Update to 1.6.0. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.6.0.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
795516ff57
gnu: r-multcomp: Update to 1.4-17. 
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-17.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
94080fc0aa
gnu: r-magick: Update to 2.7.2. 
* gnu/packages/cran.scm (r-magick): Update to 2.7.2.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
799e6b1b20
gnu: r-svdialogs: Update to 1.0.3. 
* gnu/packages/cran.scm (r-svdialogs): Update to 1.0.3.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
c4300dc298
gnu: r-svgui: Update to 1.0.1. 
* gnu/packages/cran.scm (r-svgui): Update to 1.0.1.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
0ef00dd7f6
gnu: r-raster: Update to 3.4-10. 
* gnu/packages/cran.scm (r-raster): Update to 3.4-10.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
ea359fb92f
gnu: r-doby: Update to 4.6.10. 
* gnu/packages/cran.scm (r-doby): Update to 4.6.10.
[propagated-inputs]: Add r-curry and r-microbenchmark.
 2021-05-04 07:27:46 +02:00
Ricardo Wurmus
b30b025c6f
gnu: r-writexl: Update to 1.4.0. 
* gnu/packages/cran.scm (r-writexl): Update to 1.4.0.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
2f88711ce3
gnu: r-flextable: Update to 0.6.5. 
* gnu/packages/cran.scm (r-flextable): Update to 0.6.5.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
8067bcdf53
gnu: r-entropy: Update to 1.3.0. 
* gnu/packages/cran.scm (r-entropy): Update to 1.3.0.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
070b766127
gnu: r-brglm: Update to 0.7.2. 
* gnu/packages/cran.scm (r-brglm): Update to 0.7.2.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
d11b3f575f
gnu: r-rbibutils: Update to 2.1.1. 
* gnu/packages/cran.scm (r-rbibutils): Update to 2.1.1.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
58327ba184
gnu: r-reticulate: Update to 1.20. 
* gnu/packages/cran.scm (r-reticulate): Update to 1.20.
[propagated-inputs]: Add r-png and r-withr.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
c2cc32c88a
gnu: r-rastervis: Update to 0.50.2. 
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.2.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
0161d0bcf0
gnu: r-later: Update to 1.2.0. 
* gnu/packages/cran.scm (r-later): Update to 1.2.0.
[propagated-inputs]: Remove r-bh.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
22778956e8
gnu: r-parsedate: Update to 1.2.1. 
* gnu/packages/cran.scm (r-parsedate): Update to 1.2.1.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
f65d223eec
gnu: r-pillar: Update to 1.6.0. 
* gnu/packages/cran.scm (r-pillar): Update to 1.6.0.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
329bd33fb8
gnu: r-vctrs: Update to 0.3.8. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.3.8.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
13ec1ba40c
gnu: r-processx: Update to 3.5.2. 
* gnu/packages/cran.scm (r-processx): Update to 3.5.2.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
b7d7add1ad
gnu: r-cli: Update to 2.5.0. 
* gnu/packages/cran.scm (r-cli): Update to 2.5.0.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
57273b958c
gnu: r-hardyweinberg: Update to 1.7.2. 
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.2.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
df5518d5fa
gnu: r-recipes: Update to 0.1.16. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.16.
[propagated-inputs]: Add r-ellipsis.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
cf712682cc
gnu: r-inum: Update to 1.0-4. 
* gnu/packages/cran.scm (r-inum): Update to 1.0-4.
 2021-05-04 07:27:45 +02:00
Ricardo Wurmus
3008d477b5
gnu: r-pkgload: Update to 1.2.1. 
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.1.
[propagated-inputs]: Remove r-pkgbuild.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
b840705278
gnu: r-ape: Update to 5.5. 
* gnu/packages/cran.scm (r-ape): Update to 5.5.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
c6c214e3a3
gnu: r-haven: Update to 2.4.1. 
* gnu/packages/cran.scm (r-haven): Update to 2.4.1.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
f8203363a7
gnu: r-jquerylib: Update to 0.1.4. 
* gnu/packages/cran.scm (r-jquerylib): Update to 0.1.4.
[source]: Update snippet.
[arguments]: Update build phase "process-javascript".
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
7e3542600d
gnu: r-curl: Update to 4.3.1. 
* gnu/packages/cran.scm (r-curl): Update to 4.3.1.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
9afef02ebd
gnu: r-servr: Update to 0.22. 
* gnu/packages/cran.scm (r-servr): Update to 0.22.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
912a8a2ece
gnu: r-httpuv: Update to 1.6.0. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.0.
[propagated-inputs]: Remove r-bh.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
2e59bab732
gnu: r-callr: Update to 3.7.0. 
* gnu/packages/cran.scm (r-callr): Update to 3.7.0.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
2a5c02e172
gnu: r-tidyverse: Update to 1.3.1. 
* gnu/packages/cran.scm (r-tidyverse): Update to 1.3.1.
[propagated-inputs]: Add r-dtplyr, r-googledrive, and r-googlesheets4.
[native-inputs]: Add r-knitr.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
9aa1bde3b1
gnu: r-shadowtext: Update to 0.0.8. 
* gnu/packages/cran.scm (r-shadowtext): Update to 0.0.8.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
b9c5f17d23
gnu: r-mboost: Update to 2.9-5. 
* gnu/packages/cran.scm (r-mboost): Update to 2.9-5.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
a297fc6f74
gnu: r-ellipsis: Update to 0.3.2. 
* gnu/packages/cran.scm (r-ellipsis): Update to 0.3.2.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
e68e3f68a5
gnu: r-v8: Update to 3.4.2. 
* gnu/packages/cran.scm (r-v8): Update to 3.4.2.
[inputs]: Add zlib.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
14356d23be
gnu: r-brio: Update to 1.1.2. 
* gnu/packages/cran.scm (r-brio): Update to 1.1.2.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
6c07e74106
gnu: Add r-curry. 
* gnu/packages/cran.scm (r-curry): New variable.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
946f1608ae
gnu: Add r-googlesheets4. 
* gnu/packages/cran.scm (r-googlesheets4): New variable.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
4c2826df65
gnu: Add r-ids. 
* gnu/packages/cran.scm (r-ids): New variable.
 2021-05-04 07:27:44 +02:00
Ricardo Wurmus
11108a9ab4
gnu: Add r-googledrive. 
* gnu/packages/cran.scm (r-googledrive): New variable.
 2021-05-04 07:27:43 +02:00
Ricardo Wurmus
fadf5765c1
gnu: Add r-dtplyr. 
* gnu/packages/cran.scm (r-dtplyr): New variable.
 2021-05-04 07:27:43 +02:00
Ricardo Wurmus
8a3766e1d3
gnu: Add r-conflicted. 
* gnu/packages/cran.scm (r-conflicted): New variable.
 2021-05-04 07:27:43 +02:00
Ricardo Wurmus
aa9a94bba9
gnu: r-abn: Update to 2.5-0. 
* gnu/packages/cran.scm (r-abn): Move from here...
* gnu/packages/bioconductor.scm (r-abn): ...to here; update to 2.5-0.
[propagated-inputs]: Add r-rgraphviz.
 2021-05-04 07:27:43 +02:00
Michael Rohleder
d260bd51b5
gnu: emacs-yasnippet-snippets: Update to 0.24. 
* gnu/packages/emacs-xyz.scm (emacs-yasnippet-snippets): Update to 0.24.
[propagated-inputs]: Remove emacs-s.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-04 01:05:23 +02:00
Michael Rohleder
8a934d856f
gnu: emacs-rg: Update to 2.0.3. 
* gnu/packages/emacs-xyz.scm (emacs-rg): Update to 2.0.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-04 01:03:58 +02:00
Xinglu Chen
3f90245d91
gnu: emacs-org-roam: Update to 1.2.4. 
* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 1.2.4.
[native-inputs]: Add texinfo.
[arguments]: Install image and Texinfo documentation.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-04 01:02:32 +02:00
Michael Rohleder
1d5560494b
gnu: chess: Fix paths in installed shell scripts. 
* gnu/packages/games.scm (chess)[arguments]: Add a 'fix-shell-scripts phase.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-05-04 00:59:40 +02:00
nixo
cc7c1f904e
gnu: Add julia-gumbo. 
* gnu/packages/julia-xyz.scm (julia-gumbo): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 23:10:02 +02:00
nixo
74a7bb81f9
gnu: Add julia-gumbo-jll. 
* gnu/packages/julia-xyz.scm (julia-gumbo-jll): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 23:10:02 +02:00
nixo
64c1c49787
gnu: Add julia-abstracttrees. 
* gnu/packages/julia-xyz.scm (julia-abstracttrees): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 23:10:02 +02:00
François J
cd95cb287e
gnu: Add git-filter-repo. 
* gnu/packages/version-control.scm (git-filter-repo): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 23:10:01 +02:00
François J
817f40d0ac
gnu: git: add a comment on why we don't build manpages 
* gnu/packages/version-control.scm (git)[native-inputs]:
    add back comment skipped by commit
    d1cada0450

Signed-off-by: François J. <francois-oss@avalenn.eu>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 23:10:01 +02:00
Tobias Geerinckx-Rice
71a4e26093
gnu: python-asdf: Update to 2.7.4. 
* gnu/packages/astronomy.scm (python-asdf): Update to 2.7.4.
 2021-05-03 22:27:30 +02:00
Tobias Geerinckx-Rice
6332ad5470
gnu: dico: Omit static libraries. 
* gnu/packages/dico.scm (dico)[arguments]: Add ‘--disable-static’ to
the #:configure-flags.
 2021-05-03 22:27:30 +02:00
Tobias Geerinckx-Rice
dbfe885e11
gnu: dico: Update to 2.11. 
* gnu/packages/dico.scm (dico): Update to 2.11.
 2021-05-03 22:27:30 +02:00
Tobias Geerinckx-Rice
6e43922f35
gnu: oath-toolkit: Update to 2.6.7. 
* gnu/packages/authentication.scm (oath-toolkit): Update to 2.6.7.
 2021-05-03 22:23:59 +02:00
Michael Rohleder
2c09755a7a
gnu: vcsh: Update to 1.20190621. 
* gnu/packages/version-control.scm (vcsh): Update to 1.20190621.
[arguments]: Add an 'install-bash-completion phase.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-05-03 22:23:59 +02:00
raingloom
9ffa81fe64
gnu: blender: Update to 2.92.0. 
* gnu/packages/graphics.scm (blender): Update to 2.92.0.
[arguments]: Set the NumPy header include path in #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-05-03 13:04:55 -04:00
Xinglu Chen
88156c603a
gnu: public-inbox: Update to 1.6.1. 
* gnu/packages/mail.scm (public-inbox)[version]: Update to 1.6.1.
[inputs]: Add optional dependencies.  ‘perl-filesys-notify-simple’ has been
superseded by ‘perl-linux-inotify2’ by upstream.
[synopsis]: Capitalize “git”.
[description]: Likewise.  Mention IMAP support.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:50 +02:00
Xinglu Chen
66f309a553
gnu: Add perl-linux-inotify2. 
* gnu/packages/perl.scm (perl-linux-inotify2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:50 +02:00
David Pflug
319e0e0aeb
gnu: odamex: Update to 0.9.0. 
* gnu/packages/games.scm (odamex): Update to 0.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:50 +02:00
Konrad Hinsen
36252dff9b
gnu: octave, octave-cli: Explain difference. 
* gnu/packages/maths.scm (octave-cli, octave): Extended synopsis.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:49 +02:00
Michael Rohleder
62b4cc14f8
gnu: chessx: Disable online version check by default. 
* gnu/packages/games.scm (chessx)[arguments]: Add phase to disable
the online version check by default.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:49 +02:00
Xinglu Chen
8e637fb548
gnu: git-modes: Update to 1.3.0. 
* gnu/packages/emacs-xyz.scm (git-modes): Update to 1.3.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:49 +02:00
Michael Rohleder
fa7dc25c2f
gnu: pioneers: Patch path to beep. 
Fixes <https://issues.guix.gnu.org/47131>

* gnu/packages/games.scm (pioneers): Patch path to beep.
[inputs]: Add beep.
[arguments]: Add phase patch-beep-path.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:49 +02:00
Michael Rohleder
55b6e1a7ad
gnu: xboard: Patch path to aplay. 
Fixes <http://issues.guix.gnu.org/47195>.

* gnu/packages/games.scm (xboard): Patch path to aplay.
[inputs]: Add alsa-utils.
[arguments]: Add phase patch-aplay-path.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-03 18:26:49 +02:00
Leo Prikler
d94e9cb774
gnu: guile-wisp: Update to 1.0.5. 
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.5.
[license]: Add license:expat and clarify conditions.
 2021-05-03 18:04:23 +02:00
Efraim Flashner
591b0c758d
gnu: perl-image-exiftool: Update to 12.16. 
* gnu/packages/photo.scm (perl-image-exiftool): Update to 12.16.
 2021-05-03 16:40:32 +03:00
Ricardo Wurmus
eb930bedf4
gnu: Add texlive-default-updmap.cfg. 
* gnu/packages/tex.scm (texlive-default-updmap.cfg): New variable.
 2021-05-03 15:36:14 +02:00
Ricardo Wurmus
3d8a48f893
gnu: Add texlive-babel-swedish. 
* gnu/packages/tex.scm (texlive-babel-swedish): New variable.

Co-authored-by: Rovanion Luckey <rovanion.luckey@gmail.com>
 2021-05-03 15:36:14 +02:00
Ricardo Wurmus
04cbef14ff
gnu: Add texlive-pagenote. 
* gnu/packages/tex.scm (texlive-pagenote): New variable.
 2021-05-03 15:36:13 +02:00
Ricardo Wurmus
5874f8a051
gnu: Add texlive-ifmtarg. 
* gnu/packages/tex.scm (texlive-ifmtarg): New variable.
 2021-05-03 15:36:13 +02:00
Ricardo Wurmus
a202baf8e9
gnu: Add texlive-morefloats. 
* gnu/packages/tex.scm (texlive-morefloats): New variable.
 2021-05-03 15:36:13 +02:00
Ricardo Wurmus
962be3af65
gnu: Add texlive-sectsty. 
* gnu/packages/tex.scm (texlive-sectsty): New variable.
 2021-05-03 15:36:13 +02:00
Tobias Geerinckx-Rice
f0eb053dac
gnu: stgit: Update to 1.1. 
* gnu/packages/version-control.scm (stgit): Update to 1.1.
 2021-05-03 01:30:10 +02:00
Tobias Geerinckx-Rice
1f448a8a91
gnu: faudio: Update to 21.05. 
* gnu/packages/audio.scm (faudio): Update to 21.05.
 2021-05-03 01:30:10 +02:00
Tobias Geerinckx-Rice
4344978af3
gnu: perl-net-dns: Update to 1.31. 
* gnu/packages/networking.scm (perl-net-dns): Update to 1.31.
 2021-05-03 01:30:10 +02:00
Tobias Geerinckx-Rice
8337fc96c8
gnu: perl-file-readbackwards: Update to 1.06. 
* gnu/packages/perl.scm (perl-file-readbackwards): Update to 1.06.
 2021-05-03 01:30:10 +02:00
Tobias Geerinckx-Rice
be38994982
gnu: glances: Update to 3.1.7. 
* gnu/packages/python-xyz.scm (glances): Update to 3.1.7.
 2021-05-03 01:30:10 +02:00
Leo Famulari
1fdaf46c1e
gnu: linux-libre 5.4: Update to 5.4.116. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.116.
(linux-libre-5.4-pristine-source): Update hash.
 2021-05-02 18:20:32 -04:00
Leo Famulari
dcf3cee477
gnu: linux-libre 5.10: Update to 5.10.34. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.34.
(linux-libre-5.10-pristine-source): Update hash.
 2021-05-02 18:20:32 -04:00
Leo Famulari
d27f072961
gnu: linux-libre: Update to 5.11.18. 
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.18.
(linux-libre-5.11-pristine-source): Update hash.
 2021-05-02 18:20:28 -04:00
Tobias Geerinckx-Rice
bf5374f493
gnu: global: Update to 6.6.6. 
* gnu/packages/code.scm (global): Update to 6.6.6.
 2021-05-02 23:52:12 +02:00
Tobias Geerinckx-Rice
42e5491797
gnu: lldpd: Update to 1.0.11. 
* gnu/packages/networking.scm (lldpd): Update to 1.0.11.
 2021-05-02 23:49:08 +02:00
Tobias Geerinckx-Rice
aa74d37b6f
gnu: cloc: Update to 1.90. 
* gnu/packages/code.scm (cloc): Update to 1.90.
 2021-05-02 23:49:08 +02:00
Tobias Geerinckx-Rice
42adc2142a
gnu: bpytop: Update to 1.0.65. 
* gnu/packages/admin.scm (bpytop): Update to 1.0.65.
 2021-05-02 23:49:08 +02:00
Tobias Geerinckx-Rice
9a34b56f5d
gnu: kitty: Update to 0.20.2. 
* gnu/packages/terminals.scm (kitty): Update to 0.20.2.
 2021-05-02 23:49:08 +02:00
Tobias Geerinckx-Rice
065d2cd6ce
gnu: kexec-tools: Update to 2.0.22. 
* gnu/packages/linux.scm (kexec-tools): Update to 2.0.22.
 2021-05-02 19:03:47 +02:00
Mathieu Othacehe
2710df38b0
gnu: gupnp: Move gsettings-desktop-schemas to propagated-inputs. 
This fixes the following test failure:

Bail out! GLib-GIO-FATAL-ERROR: Settings schema 'org.gnome.system.proxy' is not installed
--- stderr ---

(/tmp/guix-build-gupnp-1.2.4.drv-0/build/tests/gtest/test-context:599):
GLib-GIO-ERROR **: 15:37:55.097: Settings schema 'org.gnome.system.proxy' is
not installed

* gnu/packages/gnome.scm (gupnp)[inputs]: Move gsettings-desktop-schemas to ...
[propagated-inputs]: ... here.
 2021-05-02 17:44:37 +02:00
Mathieu Othacehe
83d21785a9
gnu: cuirass: Update to 1.0.0-17.31fd4d4. 
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-17.31fd4d4.
[inputs]: Switch to guile-squee-dev.
 2021-05-02 17:29:46 +02:00
Mathieu Othacehe
744b07bdbf
gnu: Add guile-squee-dev. 
* gnu/packages/ci.scm (guile-squee-dev): New variable.
 2021-05-02 17:29:46 +02:00
Raghav Gururajan
061823da03
gnu: gupnp: Add gsettings-desktop-schemas for tests. 
This fixes the fatal error "Settings schema 'org.gnome.system.proxy' is not
installed", which causes build to fail.

* gnu/packages/gnome.scm (gupnp)[native-inputs]: Add gsettings-desktop-schemas.
 2021-05-02 08:59:31 -04:00
Raghav Gururajan
49d8f954e6
gnu: Add tgcli. 
* gnu/packages/telegram.scm (tgcli): New variable.
 2021-05-02 07:45:27 -04:00
Raghav Gururajan
255ff5ee28
gnu: Add python-mkdocs-material. 
* gnu/packages/python-xyz.scm (python-mkdocs-material): New variable.
 2021-05-02 07:45:27 -04:00
Raghav Gururajan
5b8e9eec08
gnu: Add python-pymdown-extensions. 
* gnu/packages/python-xyz.scm (python-pymdown-extensions): New variable.
 2021-05-02 07:45:27 -04:00
Raghav Gururajan
ad8ee53cb1
gnu: Add python-mkdocs. 
* gnu/packages/python-xyz.scm (python-mkdocs): New variable.
 2021-05-02 07:45:27 -04:00
Raghav Gururajan
caf84530e0
gnu: Add python-lunr. 
* gnu/packages/python-xyz.scm (python-lunr): New variable.
 2021-05-02 07:45:27 -04:00
Raghav Gururajan
edc946dde3
gnu: Add python-nltk@3.4. 
* gnu/packages/python-xyz.scm (python-nltk-3.4): New variable.
 2021-05-02 07:45:26 -04:00
Raghav Gururajan
e0f74524a1
gnu: python-nltk: Update to 3.6.2. 
This version is only available in zip format.

* gnu/packages/python-xyz.scm (python-nltk)[version]: Update to 3.6.2.
[uri]: Use zip extension.
[native-inputs]: Add unzip.
 2021-05-02 07:45:26 -04:00
Raghav Gururajan
6d7e1bdb03
gnu: Add python-pytest-click. 
* gnu/packages/python-check.scm (python-pytest-click): New variable.
 2021-05-02 07:45:26 -04:00
Raghav Gururajan
12ca316b83
gnu: Add python-yaspin. 
* gnu/packages/python-xyz.scm (python-yaspin): New variable.
 2021-05-02 07:45:26 -04:00
Raghav Gururajan
71005247cd
gnu: Add python-colorful. 
* gnu/packages/python-xyz.scm (python-colorful): New variable.
 2021-05-02 07:45:26 -04:00
Tobias Geerinckx-Rice
1b792e8b52
gnu: libostree: Update to 2021.2. 
* gnu/packages/package-management.scm (libostree): Update to 2021.2.
 2021-05-02 03:00:05 +02:00
Tobias Geerinckx-Rice
0cf79dd998
gnu: nim: Update to 1.4.6. 
* gnu/packages/nim.scm (nim): Update to 1.4.6.
 2021-05-02 03:00:04 +02:00
Tobias Geerinckx-Rice
f1ecda50de
gnu: openmpi: Update to 4.1.1. 
* gnu/packages/mpi.scm (openmpi): Update to 4.1.1.
 2021-05-02 03:00:04 +02:00
Tobias Geerinckx-Rice
42658a67b7
gnu: libxdg-basedir: Omit static library. 
* gnu/packages/freedesktop.scm (libxdg-basedir)[arguments]:
Add ‘--disable-static’ to #:configure-flags.
 2021-05-02 03:00:04 +02:00
Tobias Geerinckx-Rice
e3da51285a
gnu: libxdg-basedir: Update to 1.2.3. 
* gnu/packages/freedesktop.scm (libxdg-basedir): Update to 1.2.3.
 2021-05-02 03:00:04 +02:00
Tobias Geerinckx-Rice
efd5c3b7c3
gnu: gajim: Update to 1.3.2. 
* gnu/packages/messaging.scm (gajim): Update to 1.3.2.
 2021-05-02 03:00:04 +02:00
Tobias Geerinckx-Rice
145cffe103
gnu: dante: Update to 1.4.3. 
* gnu/packages/networking.scm (dante): Update to 1.4.3.
 2021-05-02 03:00:04 +02:00
Tobias Geerinckx-Rice
c6e9efd62d
gnu: pidgin: Update to 2.14.4. 
* gnu/packages/messaging.scm (pidgin): Update to 2.14.4.
[arguments]: Add now-required ‘--disable-gevolution’ configure flag.
Remove obsoleted 'eat-leftovers phase.
 2021-05-02 03:00:04 +02:00
Maxime Devos
9c44af6bd6
gnu: Replace hard-coded "CC=gcc" with CC-FOR-TARGET calls. 
* gnu/packages/admin.scm (cbatticon)[arguments]<#:make-flags>: Use
CC-FOR-TARGET.
* gnu/packages/assembly.scm (dev86)[arguments]<#:make-flags>: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]<#:make-flags>: Likewise.
* gnu/packages/crypto.scm (signify, keyutils, ssss, libscrypt, enchive)
[arguments]<#:make-flags>: Likewise.
* gnu/packages/emacs-xyz.scm (emacs-emacsql, emacs-telega)[arguments]
<#:phases>: Likewise.
* gnu/packages/gnupg.scm (pgpdump)[arguments]<#:make-flags>: Likewise.
* gnu/packages/image-viewers.scm (feh, imv)[arguments]<#:make-flags>:
Likewise.
* gnu/packages/image.scm (libjxr, giflib, freeimage)[arguments]
<#:make-flags>: Likewise.
* gnu/packages/irc.scm (ii, sic)[arguments]<#:make-flags>: Likewise.
* gnu/packages/lua.scm (make-lua-expat, make-lua-ossl, make-lua-sec)
(make-lua-cqueues, make-lua-lgi, lua-resty-signal)[arguments]
<#:make-flags>: Likewise.
* gnu/packages/networking.scm (httping, pixiewps, sslh, nethogs, spiped)
(can-utils, hcxtools, batctl)[arguments]<#:make-flags>: Likewise.
* gnu/packages/pdf.scm (fbida)[arguments]<#:make-flags>: Likewise.
* gnu/packages/ssh.scm (endlessh)[arguments]<#:make-flags>: Likewise.
* gnu/packages/toys.scm (nyancat)[arguments]<#:make-flags>: Likewise.
* gnu/packages/upnp.scm (miniupnpc)[arguments]<#:make-flags>: Likewise.
* gnu/packages/xdisorg.scm (bemenu, xbanish, sxhkd, xcape, xssproxy)
(xrandr-invert-colors, hsetroot, xsettingsd)[arguments]<#:make-flags>:
Likewise.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-05-02 03:00:03 +02:00
Vagrant Cascadian
eb305784bf
gnu: u-boot-pinebook-pro-rk3399: Update to version 2021.07-rc1. 
Version 2021.07-rc1 supports video output on the eDP panel.

* gnu/packages/bootloaders.scm (u-boot-2021.07): New variable.
  (u-boot-pinebook-pro-rk3399)[source, version]: Use u-boot-2021.07.
 2021-05-01 14:13:50 -07:00
Vagrant Cascadian
3a851d4557
gnu: u-boot: Patch to fix boot regressions for some platforms. 
The previous workaround stopped the preboot phase from loading USB
support, which makes it impossible to use a USB keyboard to select a
generation from the boot menu without using a serial console.

* gnu/packages/patches/u-boot-rockchip-inno-usb.patch: New File.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/bootloaders.scm (%u-boot-rockchip-inno-usb-patch): New variable.
  (u-boot)[source]: Add patch.
  (u-boot-rockpro64-rk3399, u-boot-pinebook-pro-rk3399): Remove obsolete phase.
 2021-05-01 14:12:08 -07:00
Tobias Geerinckx-Rice
10ecae4503
gnu: libglvnd: Update to 1.3.3. 
* gnu/packages/gl.scm (libglvnd): Update to 1.3.3.
 2021-05-01 21:11:49 +02:00
Tobias Geerinckx-Rice
d9d1efe971
gnu: retroarch: Update to 1.9.2. 
* gnu/packages/emulators.scm (retroarch): Update to 1.9.2.
[arguments]: Remove obsolete ‘--disable-git_version’ configure flag.
 2021-05-01 21:11:49 +02:00
Tobias Geerinckx-Rice
fd02abd1df
gnu: gnome-autoar: Update to 0.3.2. 
* gnu/packages/gnome.scm (gnome-autoar): Update to 0.3.2.
 2021-05-01 21:11:49 +02:00
Tobias Geerinckx-Rice
b2c62c6f8b
gnu: duplicity: Update to 0.8.19. 
* gnu/packages/backup.scm (duplicity): Update to 0.8.19.
[arguments]: Set TMPDIR.  Rename 'check-setup to 'set-up-tests.
 2021-05-01 21:11:48 +02:00
Tobias Geerinckx-Rice
0e801d353e
gnu: benchmark: Update to 1.5.3. 
* gnu/packages/benchmark.scm (benchmark): Update to 1.5.3.
 2021-05-01 21:11:48 +02:00
Leo Prikler
90b4890c63
gnu: appstream-glib: Add gsettings-desktop-schemas for tests. 
This fixes the fatal error "Settings schema 'org.gnome.system.proxy' is not
installed", which causes builds to fail.

* gnu/packages/glib.scm (appstream-glib)[native-inputs]: Add
gsettings-desktop-schemas.
 2021-05-01 20:57:01 +02:00
Leo Prikler
a5e827a3ea
gnu: emacs-julia-snail: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-julia-snail)[arguments]: Drop #:phases.
Use #:include to add julia sources.
 2021-05-01 15:56:43 +02:00
Leo Prikler
0bb41f6db6
gnu: emacs-haskell-mode: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-haskell-mode)[#:phases]<install>: Install
to elpa-directory.
 2021-05-01 15:56:43 +02:00
Leo Prikler
3c501881c1
gnu: emacs-wget: Port to emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-wget)[build-system]: Use
emacs-build-system.
[arguments]: Drop #:modules and #:imported-modules.
Adjust #:phases accordingly.
 2021-05-01 15:56:43 +02:00
Leo Prikler
0912a64ec0
gnu: emacs-w3m: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-w3m)[#:configure-flags]: Use
elpa-directory to determine lispdir.
[#:phases]<install>: Likewise.
 2021-05-01 15:56:42 +02:00
Leo Prikler
89c0505e90
gnu: emacs-dvc: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-dvc)[#:configure-flags]: Use elpa-directory
for lispdir.
 2021-05-01 15:56:42 +02:00
Leo Prikler
47bd851d93
gnu: geiser-gauche: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (geiser-gauche)[arguments]: Use #:include rather
than #:phases to add geiser-gauche.scm.
 2021-05-01 15:56:42 +02:00
Morgan Smith
d47d50d5a4
gnu: guile-studio: Add missing input. 
* gnu/packages/guile-xyz.scm (guile-studio)[inputs]:
Add emacs-geiser-guile.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:42 +02:00
Morgan Smith
0bc6708f68
gnu: emacs-flycheck-guile: Add missing input. 
* gnu/packages/emacs-xyz.scm (emacs-flycheck-guile)[propagated-inputs]:
Add emacs-geiser-guile.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:42 +02:00
Morgan Smith
57681f1640
gnu: emacs-guix: Update to 0.5.2-4.8ce6d21. 
* gnu/packages/emacs-xyz.scm (emacs-guix): Update to 0.5.2-4.8ce6d21.
[source]: Update upstream URL.
[propagated-inputs]: Add emacs-geiser-guile.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:41 +02:00
Morgan Smith
7141b010ee
gnu: Add emacs-geiser-guile. 
* gnu/packages/patches/emacs-geiser-guile-auto-activate.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it here.
* gnu/packages/emacs-xyz.scm (emacs-geiser-guile): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:41 +02:00
Morgan Smith
c1a78a1081
gnu: emacs-geiser: Update to 0.13. 
* gnu/packages/patches/emacs-geiser-autoload-activate-implementation.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it here.
* gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.13.
[source]: Change upstream URL.
[build-system]: Change to emacs-build-system.
[arguments]: Adjust accordingly.
[native-inputs]: Remove emacs, autoconf, and automake.
[description]: State that other packages are needed for geiser to be useful.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:41 +02:00
Leo Prikler
9c5f9f067e
gnu: emacs-realgud: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-realgud)[fix-autogen-script]: Move after
‘expand-load-path’.
 2021-05-01 15:56:41 +02:00
Leo Prikler
9184d0178d
gnu: emacs-pyim: Update to 3.6. 
* gnu/packages/emacs-xyz.scm (emacs-pyim): Update to 3.6.
 2021-05-01 15:56:41 +02:00
Leo Prikler
b8c9d9dee3
gnu: notmuch: Adjust to changes in emacs-build-system. 
* gnu/packages/mail.scm (notmuch)[configure]: Use elpa-directory.
 2021-05-01 15:56:40 +02:00
Leo Prikler
cd35b94e30
gnu: emacs-vterm: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-vterm)[substitute-vterm-module-path]:
Move after ‘unpack’.
 2021-05-01 15:56:40 +02:00
Leo Prikler
8e8a3b0eef
gnu: emacs-scel: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-scel)[#:phases]<configure>: Use
elpa-directory.
<add-el-dir-to-emacs-load-path>: Adjust location.
 2021-05-01 15:56:40 +02:00
Leo Prikler
c409cea2d8
gnu: emacs-edbi: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-edbi)[patch-path]: Execute after unpack.
[wrap-edbi-bridge]: New phase (after wrap).  Find edbi-bridge in elpa-directory.
 2021-05-01 15:56:40 +02:00
Leo Prikler
c4fac5dd7f
gnu: emacs-org-contrib: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-org-contrib)[delete-org-files]: Excurse
into elpa-directory.
 2021-05-01 15:56:40 +02:00
Leo Prikler
08d6f7fad9
gnu: emacs-sly-stepper: Remove generated sources. 
* gnu/packages/emacs-xyz.scm (sly-stepper)[source]: Add snippet to remove
autoloads.
[#:phases]: Do not delete ‘make-autoloads’ or ‘enable-autoloads-compilation’.
 2021-05-01 15:56:39 +02:00
Leo Prikler
2c010c1ba0
gnu: emacs-sly-stepper: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-sly-stepper)[#:phases]:
<add-contrib-to-emacs-load-path>: Rename to...
<expand-sly-contrib>: ... this.  Use find-files to find contrib directory.
<install>: Find slynk-stepper.lisp in elpa-directory.
 2021-05-01 15:56:39 +02:00
Leo Prikler
93d0124a09
gnu: emacs-shroud: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-shroud)[#:phases]: Add ‘expand-load-path’.
[#:configure-flags]: Use elpa-directory for lispdir.
 2021-05-01 15:56:39 +02:00
Xinglu Chen
710cdcc9ce
gnu: emacs-pdf-tools: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-pdf-tools)[#:phases]: Rename
'emacs-add-source-to-load-path' to 'emacs-expand-load-path'.
Use expand-load-path, which replaces add-source-to-load-path.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:39 +02:00
Leo Prikler
d34e6dbc4b
gnu: emacs-ert-runner: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-ert-runner)[install-executable]: Use
elpa-directory for the value of ERT_RUNNER.
 2021-05-01 15:56:39 +02:00
Leo Prikler
d303a0bc2f
gnu: emacs-howm: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-howm)[#:configure-flags]: Install to
elpa-directory.
 2021-05-01 15:56:38 +02:00