The next commits will make the functions, which are currently importing the
latest version of a package, change into importing the latest or a given
version of the package (for those updaters supporting specifying a version).
Thus the name ‘latest‘ is no longer appropriate.
* guix/upstream.scm (upstream-updater) Rename field [latest] to
[import]. (lookup-updater, package-latest-release) Adjust fieldname
accordingly.
* guix/gnu-maintenance.scm (%gnu-updater, %gnu-ftp-updater,
%savannah-updater, %sourceforge-updater, %xorg-updater,
%kernel.org-updater, %generic-html-updater),
guix/import/cpan.scm (%cpan-updater),
guix/import/cran.scm (%cran-updater, %bioconductor-updater),
guix/import/crate.scm (%crate-updater),
guix/import/egg.scm (%egg-updater),
guix/import/elpa.scm (%elpa-updater),
guix/import/gem.scm (%gem-updater),
guix/import/git.scm (%generic-git-updater),
guix/import/github.scm (%github-updater),
guix/import/gnome.scm (%gnome-updater),
guix/import/hackage.scm (%hackage-updater),
guix/import/hexpm.scm (%hexpm-updater),
guix/import/kde.scm (%kde-updater),
guix/import/launchpad.scm (%launchpad-updater),
guix/import/minetest.scm (%minetest-updater),
guix/import/opam.scm (%opam-updater),
guix/import/pypi.scm (%pypi-updater),
guix/import/stackage.scm (%stackage-updater),
tests/import-github.scm (found-sexp)
tests/transformations.scm ("options->transformation, with-latest"):
Adjust fieldname accordingly.
* guix/import/cran.scm (string->license): Add more match clauses.
(string->licenses): Split license conjunctions at "|" and apply
string->license on each license.
(description->package): Use string->licenses.
* guix/import/cran.scm (download): Handle the case where URL is a list.
(fetch-description-from-tarball): New procedure.
(fetch-description): Add #:version parameter. Honor it when REPOSITORY
is 'cran. Use 'fetch-description-from-tarball' when REPOSITORY is
'bioconductor.
(description->package): SOURCE-URL may now be a list.
(cran->guix-package): Pass VERSION to 'fetch-description'.
(cran-recursive-import): Add #:version parameter.
* guix/scripts/import/cran.scm (guix-import-cran): Expect a spec rather
than a mere package name.
* doc/guix.texi (Invoking guix import): Document it.
This fixes a bug whereby the Guix importer considers files like .f.* to be
Fortran files.
The expression "\\.f(90|95)?" would match a lot of files containing ".f"
although they are not Fortran files. Instead we should only consider files
with this *suffix*.
* guix/import/cran.scm (directory-needs-fortran?): Only check for suffixes.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* guix/import/cran.scm (%input-style): New parameter.
(format-inputs): Use it.
* guix/scripts/import/cran.scm (guix-import-cran): Set the %input-style
parameter.
(%options): Add "--style" option.
* doc/guix.texi (Invoking guix import): Document it.
* guix/import/cran.scm (%cran-canonical-url): New variable.
(description->package): Construct home-page using canonical URL.
Signed-off-by: Christopher Baines <mail@cbaines.net>
Previously, after a failed recursive import "guix import" would signal
success.
* guix/import/cran.scm (cran->guix-package): Raise a condition when all
repositories have been exhausted.
* guix/scripts/import/cran.scm (guix-import-cran): Handle errors.
This adds a key VERSION to 'recursive-import' and moves the parameter REPO to
a key. This also changes all the places that rely on 'recursive-import'.
* guix/import/utils.scm (recursive-import): Add the VERSION key. Make REPO a
key.
(package->definition): Add optional 'append-version?'.
* guix/scripts/import/crate.scm (guix-import-crate): Add the VERSION key.
* guix/import/crate.scm (crate->guix-package): Add the VERSION key.
(crate-recursive-import): Pass VERSION to recursive-import, remove now
unnecessary code.
* guix/import/cran.scm (cran->guix-package, cran-recursive-import): Change the
REPO parameter to a key.
* guix/import/elpa.scm (elpa->guix-package, elpa-recursive-import): Likewise.
* guix/import/gem.scm (gem->guix-package, recursive-import): Likewise.
* guix/import/opam.scm (opam-recurive-import): Likewise.
* guix/import/pypi.scm (pypi-recursive-import): Likewise.
* guix/import/stackage.scm (stackage-recursive-import): Likewise.
* guix/scripts/import/cran.scm (guix-import-cran): Likewise.
* guix/scripts/import/elpa.scm (guix-import-elpa): Likewise.
* tests/elpa.scm (eval-test-with-elpa): Likewise.
* tests/import-utils.scm (recursive-import): Likewise.
Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
Fixes <https://bugs.gnu.org/38836>.
Reported by Ricardo Wurmus <rekado@elephly.net>.
* guix/import/cran.scm (bioconductor-packages-list): Close the port
returned by 'http-fetch/cached'.
(fetch-description): Likewise.
* guix/import/cran.scm (vcs-file?): New procedure.
(download): Support downloading from git.
(fetch-description): Add a clause for the 'git repository type.
(files-match-pattern?): New procedure.
(tarball-files-match-pattern?): Implement in terms of FILES-MATCH-PATTERN?.
(directory-needs-fortran?, directory-needs-zlib?,
directory-needs-pkg-config?): New procedures.
(needs-fortran?, needs-zlib?, needs-pkg-config?): Rename these procedures...
(tarball-needs-fortran?, tarball-needs-zlib?, tarball-needs-pkg-config?):
...to this, and use them.
(file-hash): New procedure.
(description->package): Handle the 'git repository type.
* guix/import/utils.scm (package->definition): Handle package expression
inside of a let.
* guix/scripts/import.scm (guix-import): Handle let expressions.
* doc/guix.texi (Invoking guix import): Document it.
* guix/import/cran.scm (%bioconductor-packages-list-url): Replace variable...
(bioconductor-packages-list-url): ...with this procedure.
(bioconductor-packages-list): Accept optional TYPE argument.
(latest-bioconductor-package-version): Same.
(fetch-description): Determine package type and use it in calls to
LATEST-BIOCONDUCTOR-PACKAGE-VERSION and BIOCONDUCTOR-URI.
(description->package): Pass package type to URI helper procedure; include
package type in annotation or experiment packages from Bioconducter.
Hartmut Goebel
Ricardo Wurmus
zimoun
Sarah Morgensen
Ludovic Courtès
Efraim Flashner
Mădălin Ionel Patrașcu
Lars-Dominik Braun
Roel Janssen
Martin Becze