* gnu/packages/patches/python-seaborn-kde-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-seaborn): Use it, and update to
0.11.1.
* gnu/packages/patches/vtk-8-fix-freetypetools-build-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image-processing.scm (vtk-8): Dis-inherit from VTK. Use the
package definition that predated the update to VTK 9, taken from commit
f4dc8ac6df.
Add go@1.16 as a non-default go. Changes from 1.14: Use now-supported GO_LDSO
configuration option for setting the interpreter. Bootstrap with gccgo on
platforms which do not support go-1.4. Fix and re-enable cmd/go script tests.
Fix typo in cgoldflags patch. Break out tests into "check" phase. Remove
references to perl to reduce closure size by ~10%. Set GOCACHE so go doesn't
attempt to access $HOME.
* gnu/packages/patches/go-fix-script-tests.patch: New file.
* local.mk (dist_patch_DATA): Register it.
* gnu/packages/golang.scm (go-1.16): New variable. Use the patch.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/connman.scm (connman): Update to 1.40.
[source]: Remove upstreamed patch.
[inputs]: Add lz4, rather than propagate it from openconnect.
* gnu/packages/patches/connman-CVE-2021-33833.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Initiate new lisp-check module the same way as other language specific
ones (python-check, haskell-check).
* gnu/local.mk (GNU_SYSTEM_MODULES): Add lisp-check.scm.
* gnu/packages/lisp-check.scm (sbcl-nst, ecl-nst, cl-nst): New variables.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu/packages/patches/cups-CVE-2020-10001.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cups.scm (cups-minimal/fixed): New variable.
(cups-minimal)[replacement]: Assign it to new field.
* gnu/packages/patches/tlf-support-hamlib-4.2+.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/radio.scm (tlf): New variable.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
* gnu/packages/web.scm (linkchecker): Update to 10.0.1.
[source]: Remove patches.
[inputs]: Add python-beautifulsoup4. Replace python2-dnspython-1.16,
python2-pyxdg and python2-requests with python-dnspython, python-pyxdg and
python-requests respectively.
[native-inputs]: Replace python2-pytest, python2-miniboa and
python2-parameterized with python-pytest, python-miniboa and
python-parameterized respectively.
[arguments]: Use python 3. Replace check phase instead of deleting the
standard phase and adding a custom one. Use add-installed-pythonpath instead
of setting PYTHONPATH directly. Support disabling of tests with tests?.
[home-page]: Update URI.
* gnu/packages/patches/linkchecker-tests-require-network.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
This is a follow-up to 373c7b5791.
* gnu/packages/patches/bsdiff-CVE-2014-9862.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/patches/efivar-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (efivar)[source](patches, modules, snippet): New
fields.
[arguments]: Use CC-FOR-TARGET while at it.
Fixes <https://bugs.gnu.org/49035>.
* gnu/packages/patches/curl-7.77-tls-priority-string.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/curl.scm (curl-7.77.0)[source]: Use it.
* gnu/packages/patches/hexchat-add-libera-chat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (hexchat)[source]: Use it.
* gnu/packages/crates-io.scm (rust-ndarray-0.13): New variable.
(rust-ndarray-0.12): Inherit from above.
* gnu/packages/patches/rust-ndarray-0.13-remove-blas-src.patch: New file.
* gnu/local.mk: Register new file.
* gnu/packages/tor.scm (tor): Update to 0.4.6.5.
[source]: Add a patch to fix building with GCC 7.
* gnu/packages/patches/tor-fix-build-with-gcc-7.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
This fixes the nonreproducibility in gcc documented here:
https://reproducible-builds.org/docs/archives/#gnu-libtool
* gnu/packages/patches/gcc-8-sort-libtool-find-output.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gcc.scm (gcc-8)[source]: Apply it.
* gnu/packages/patches/connman-CVE-2021-33833.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/connman.scm (connman)[source]: Use it.
* gnu/packages/patches/polkit-CVE-2021-3560.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/polkit.scm (polkit/fixed): New variable.
(polkit)[replacement]: New field.
* gnu/packages/patches/nsis-source-date-epoch.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/installers.scm (make-nsis)[source]: Apply it.
* gnu/packages/patches/mosaicatcher-unbundle-htslib.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bioinformatics.scm (mosaicatcher): New variable.
This is a followup to 4ebd4a58ce which
removed the patch, but it was still necessary for some dependents.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/fabric-management.scm (ucx)[source](patches): New field.
* gnu/packages/games.scm (pinball): Update to 3.1.20201218.
[source]: Tarballs no longer published on sourceforge, so use git-fetch.
[native-inputs]: New field for bootstrapping inputs.
[inputs]: Add libltdl.
[arguments]: Add custom 'bootstrap' phase.
* gnu/packages/patches/pinball-system-ltdl.patch: Adjust to latest source.
* gnu/packages/patches/pinball-const-fix.patch,
gnu/packages/patches/pinball-cstddef.patch,
gnu/packages/patches/pinball-missing-separators.patch,
gnu/packages/patches/pinball-src-deps.patch: Delete upstreamed patches.
* gnu/local.mk (dist_patch_DATA): Remove them.
