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guix/gnu/packages/opencog.scm
Ludovic Courtès b0e7b6992f
gnu: Remove ".git" from "https://github/…/….git".
Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix
swh) would sometimes return #f for these because the ".git" URLs are
redirects to the non-".git" URLs.  Consequently, 'guix lint -c archival'
would keep saying "scheduled Software Heritage archival"; likewise, the
fallback download code would fail.

* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/aidc.scm,
gnu/packages/algebra.scm,
gnu/packages/android.scm,
gnu/packages/animation.scm,
gnu/packages/arcan.scm,
gnu/packages/assembly.scm,
gnu/packages/audio.scm,
gnu/packages/authentication.scm,
gnu/packages/avr.scm,
gnu/packages/axoloti.scm,
gnu/packages/backup.scm,
gnu/packages/bash.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioconductor.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/boost.scm,
gnu/packages/build-tools.scm,
gnu/packages/c.scm,
gnu/packages/calendar.scm,
gnu/packages/cdrom.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/chez.scm,
gnu/packages/clojure.scm,
gnu/packages/code.scm,
gnu/packages/compression.scm,
gnu/packages/compton.scm,
gnu/packages/coq.scm,
gnu/packages/cpp.scm,
gnu/packages/cran.scm,
gnu/packages/crypto.scm,
gnu/packages/curl.scm,
gnu/packages/databases.scm,
gnu/packages/datastructures.scm,
gnu/packages/debug.scm,
gnu/packages/disk.scm,
gnu/packages/distributed.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/dns.scm,
gnu/packages/docker.scm,
gnu/packages/education.scm,
gnu/packages/efi.scm,
gnu/packages/elixir.scm,
gnu/packages/emacs-xyz.scm,
gnu/packages/embedded.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/erlang.scm,
gnu/packages/fabric-management.scm,
gnu/packages/file-systems.scm,
gnu/packages/finance.scm,
gnu/packages/firmware.scm,
gnu/packages/flashing-tools.scm,
gnu/packages/fonts.scm,
gnu/packages/fontutils.scm,
gnu/packages/fpga.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/genealogy.scm,
gnu/packages/genimage.scm,
gnu/packages/geo.scm,
gnu/packages/gimp.scm,
gnu/packages/gl.scm,
gnu/packages/gnome-xyz.scm,
gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/golang.scm,
gnu/packages/gpodder.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/groff.scm,
gnu/packages/groovy.scm,
gnu/packages/gtk.scm,
gnu/packages/guile-xyz.scm,
gnu/packages/guile.scm,
gnu/packages/hardware.scm,
gnu/packages/haskell-apps.scm,
gnu/packages/haskell-xyz.scm,
gnu/packages/hexedit.scm,
gnu/packages/i2p.scm,
gnu/packages/ibus.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/ipfs.scm,
gnu/packages/java-graphics.scm,
gnu/packages/java-maths.scm,
gnu/packages/java.scm,
gnu/packages/javascript.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/jupyter.scm,
gnu/packages/kodi.scm,
gnu/packages/language.scm,
gnu/packages/lego.scm,
gnu/packages/less.scm,
gnu/packages/libusb.scm,
gnu/packages/linux.scm,
gnu/packages/lirc.scm,
gnu/packages/lisp-xyz.scm,
gnu/packages/llvm.scm,
gnu/packages/logging.scm,
gnu/packages/lolcode.scm,
gnu/packages/lua.scm,
gnu/packages/lxde.scm,
gnu/packages/lxqt.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/markup.scm,
gnu/packages/maths.scm,
gnu/packages/maven.scm,
gnu/packages/mes.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/node-xyz.scm,
gnu/packages/ocaml.scm,
gnu/packages/ocr.scm,
gnu/packages/onc-rpc.scm,
gnu/packages/opencl.scm,
gnu/packages/opencog.scm,
gnu/packages/pantheon.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/perl6.scm,
gnu/packages/phabricator.scm,
gnu/packages/popt.scm,
gnu/packages/printers.scm,
gnu/packages/prolog.scm,
gnu/packages/protobuf.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/python-xyz.scm,
gnu/packages/qt.scm,
gnu/packages/radio.scm,
gnu/packages/rails.scm,
gnu/packages/rdf.scm,
gnu/packages/rednotebook.scm,
gnu/packages/rpc.scm,
gnu/packages/rsync.scm,
gnu/packages/ruby.scm,
gnu/packages/rust.scm,
gnu/packages/scheme.scm,
gnu/packages/screen.scm,
gnu/packages/security-token.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/shellutils.scm,
gnu/packages/simh.scm,
gnu/packages/sml.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/stenography.scm,
gnu/packages/sync.scm,
gnu/packages/syncthing.scm,
gnu/packages/synergy.scm,
gnu/packages/telephony.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tmux.scm,
gnu/packages/tor.scm,
gnu/packages/toys.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/vim.scm,
gnu/packages/virtualization.scm,
gnu/packages/vlang.scm,
gnu/packages/vnc.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wireservice.scm,
gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm,
tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
2020-07-12 23:08:15 +02:00

304 lines
12 KiB
Scheme

;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2020 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages opencog)
#:use-module (gnu packages)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
#:use-module (gnu packages databases)
#:use-module (gnu packages guile)
#:use-module (gnu packages language)
#:use-module (gnu packages linux)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix build-system cmake)
#:use-module (guix utils))
(define-public cogutil
;; The last release was in 2016. Other OpenCog packages require a later
;; version.
(let ((commit "b07b41b2eaf01627c78b27f1f28bb09ef7086f8e")
(revision "1"))
(package
(name "cogutil")
(version (git-version "2.0.3" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/cogutil")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1ymmcrinp0prlxsmxmwdjjl4kgaj7wzq39d5b1q2apgg94yfdhqb"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"))
(inputs
`(("boost" ,boost)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/cogutil/")
(synopsis "Low-level C++ programming utilities used by OpenCog components")
(description "The OpenCog utilities is a miscellaneous collection of C++
utilities use for typical programming tasks in multiple OpenCog projects.")
;; Either of these licenses.
(license (list license:agpl3 license:asl2.0)))))
(define-public atomspace
;; The last release was in 2016 and doesn't build with our Boost package.
(let ((commit "86c848dfc7135b3c47deb581f8da54a60f6711c9")
(revision "1"))
(package
(name "atomspace")
(version (git-version "5.0.3" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/atomspace")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0vxzhszb0z8081li38hid07a5axzxyflsmq1mcn4b1k4z1j8ggch"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list (string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("boost" ,boost)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)
("postgresql" ,postgresql)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/atomspace/")
(synopsis "OpenCog hypergraph database, query system and rule engine")
(description "The OpenCog AtomSpace is an in-RAM @dfn{knowledge
representation} (KR) database, an associated query engine and graph-re-writing
system, and a rule-driven inferencing engine that can apply and manipulate
sequences of rules to perform reasoning. It is a layer that sits on top of
ordinary distributed (graph) databases, providing a large variety of advanced
features not otherwise available.")
(license license:agpl3))))
(define-public cogserver
;; There are no releases.
(let ((commit "ec5f3b9590db0f6a085b5d0320f5d3710e0f1635")
(revision "2"))
(package
(name "cogserver")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/cogserver")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1h0vcxb6n5dc654xqinqcxc7dxwcs6bsywgir8rhrqiykk760mzl"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list (string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("atomspace" ,atomspace)
("boost" ,boost)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/cogserver/")
(synopsis "OpenCog network server")
(description "The OpenCog Cogserver is a network and job server for the
OpenCog framework.")
(license license:agpl3))))
(define-public attention
;; There are no releases.
(let ((commit "87d43679280ce486cd6757765d2e1df6d502991d")
(revision "1"))
(package
(name "attention")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/attention")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0sndslphicv6w9qpag168rqkxq5sf71l5qbfx6zhsd5bzlf5fhwv"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list
(string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("atomspace" ,atomspace)
("boost" ,boost)
("cogserver" ,cogserver)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/attention/")
(synopsis "OpenCog attention allocation subsystem")
(description "Attention Allocation is an OpenCog subsystem meant to
control the application of processing and memory resources to specific
tasks.")
(license license:agpl3))))
(define-public opencog
;; There are no recent releases.
(let ((commit "ceac90507610cb2d0ee98f97a2086865292b1204")
(revision "1"))
(package
(name "opencog")
(version (git-version "0.1.4" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/opencog")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1j8wv910fvrmph370wv5pv2f4bc2s9vl6i7bw3pkmwbdhxkhjbhm"))))
(build-system cmake-build-system)
(arguments
`(#:test-target "tests"
#:configure-flags
(list
(string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))))
(inputs
`(("attention" ,attention)
("atomspace" ,atomspace)
("boost" ,boost)
("cogserver" ,cogserver)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)
("libuuid" ,util-linux "lib")
("link-grammar" ,link-grammar)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/attention/")
(synopsis "Framework for integrated artificial intelligence")
(description "OpenCog is a framework for developing AI systems,
especially appropriate for integrative multi-algorithm systems, and artificial
general intelligence systems. It currently contains a functional core
framework, and a number of cognitive agents at varying levels of completion,
some already displaying interesting and useful functionalities alone and in
combination.")
(license license:agpl3))))
(define-public agi-bio
;; There are no releases.
(let ((commit "b5c6f3d99e8cca3798bf0cdf2c32f4bdb8098efb")
(revision "1"))
(package
(name "agi-bio")
(version (git-version "0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/opencog/agi-bio")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0c3q0nhmd03nvqm1ih10y28n596cjvfhkcfvzw2fmz1sn3ywdah4"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; there are none
#:configure-flags
(list
(string-append "-DGUILE_INCLUDE_DIR="
(assoc-ref %build-inputs "guile")
"/include/guile/2.2/")
(string-append "-DGUILE_SITE_DIR="
(assoc-ref %outputs "out")
"/share/guile/site/2.2/"))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-unqualified-load
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "bioscience/bioscience.scm"
(("\\(load \"bioscience/types/bioscience_types.scm\"\\)")
(format #f "(load \"~a/bioscience/types/bioscience_types.scm\")"
(string-append (assoc-ref outputs "out")
"/share/guile/site/2.2/opencog"))))
#t)))))
(inputs
`(("atomspace" ,atomspace)
("cogutil" ,cogutil)
("gmp" ,gmp)
("guile" ,guile-2.2)))
(native-inputs
`(("cxxtest" ,cxxtest)
("python" ,python-minimal)
("pkg-config" ,pkg-config)))
(home-page "https://github.com/opencog/agi-bio")
(synopsis "Genomic and proteomic data exploration and pattern mining")
(description "This is a package for genomic and proteomic research using
the OpenCog toolset with Guile. This includes experiments in applying pattern
mining and other OpenCog components.")
(license license:agpl3))))