freebsd-ports/biology/phred/files/patch-Makefile

--- Makefile.orig	2002-07-27 07:22:10.000000000 +0900
+++ Makefile	2007-12-06 16:41:35.000000000 +0900
@@ -12,8 +12,8 @@
 
 # UNIX specific definitions (default)
 #
-CC= cc
-CFLAGS= -O -DANSI_C $(LXFLAGS)
+CC?= cc
+CFLAGS+= -DANSI_C $(LXFLAGS)
 CLIB= -lm
 
 # Windows 'nmake' specific definitions
New port: biology/consed viewing and editing workbench for sequence assembly Consed is a tool for viewing, editing, and finishing sequence assemblies. The port is constituted of 4 parts: biology/phred: base caller with quality evaluation biology/phrap: sequence assembler for shotgun sequencing biology/consed: workbench biology/phd2fasta: small utility All these can be used separately; however, most function of consed depends on the others. Although these programs are licensed freely for academic and nonprofit purposes, users have to contact the authors to get the softwares. Phred (including phd2fasta) and phrap are emailed, and consed can be downloaded to a restricted IP address. For commercial users, the licensing fee is ca. $10,000 at the time of writing. PR: ports/118548 Submitted by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp> 2008-05-24 09:04:45 +02:00			`--- Makefile.orig 2002-07-27 07:22:10.000000000 +0900`
			`+++ Makefile 2007-12-06 16:41:35.000000000 +0900`
			`@@ -12,8 +12,8 @@`

			`# UNIX specific definitions (default)`
			`#`
			`-CC= cc`
			`-CFLAGS= -O -DANSI_C $(LXFLAGS)`
			`+CC?= cc`
			`+CFLAGS+= -DANSI_C $(LXFLAGS)`
			`CLIB= -lm`

			`# Windows 'nmake' specific definitions`