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- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
bin/bioruby
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
bin/br_biofetch.rb
bin/br_bioflat.rb
bin/br_biogetseq.rb
bin/br_pmfetch.rb
Update to 0.3.8.
2002-07-07 20:21:43 +02:00
@unexec if cmp -s %D/etc/bioinformatics/seqdatabase.ini %D/etc/bioinformatics/seqdatabase.ini.sample; then rm -f %D/etc/bioinformatics/seqdatabase.ini; fi
etc/bioinformatics/seqdatabase.ini.sample
@exec [ ! -f %B/etc/bioinformatics/seqdatabase.ini ] && cp %B/%f %B/etc/bioinformatics/seqdatabase.ini
@dirrm etc/bioinformatics
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
%%RUBY_SITELIBDIR%%/bio.rb
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
%%RUBY_SITELIBDIR%%/bio/alignment.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/command.rb
%%RUBY_SITELIBDIR%%/bio/db.rb
%%RUBY_SITELIBDIR%%/bio/feature.rb
%%RUBY_SITELIBDIR%%/bio/location.rb
%%RUBY_SITELIBDIR%%/bio/pathway.rb
%%RUBY_SITELIBDIR%%/bio/reference.rb
%%RUBY_SITELIBDIR%%/bio/sequence.rb
%%RUBY_SITELIBDIR%%/bio/shell.rb
Update to 0.3.2.
2001-11-28 14:46:31 +01:00
%%RUBY_SITELIBDIR%%/bio/appl/blast.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/clustalw.rb
%%RUBY_SITELIBDIR%%/bio/appl/emboss.rb
%%RUBY_SITELIBDIR%%/bio/appl/fasta.rb
%%RUBY_SITELIBDIR%%/bio/appl/hmmer.rb
%%RUBY_SITELIBDIR%%/bio/appl/mafft.rb
%%RUBY_SITELIBDIR%%/bio/appl/psort.rb
%%RUBY_SITELIBDIR%%/bio/appl/sim4.rb
%%RUBY_SITELIBDIR%%/bio/appl/bl2seq/report.rb
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/blast/format0.rb
Update to 0.3.8.
2002-07-07 20:21:43 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/blast/format8.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/blast/report.rb
Update to 0.3.8.
2002-07-07 20:21:43 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/blast/rexml.rb
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/blast/wublast.rb
Update to 0.3.8.
2002-07-07 20:21:43 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/blast/xmlparser.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/appl/blat/report.rb
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/clustalw/report.rb
Update to 0.3.8.
2002-07-07 20:21:43 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/fasta/format10.rb
%%RUBY_SITELIBDIR%%/bio/appl/fasta/format6.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/genscan/report.rb
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
%%RUBY_SITELIBDIR%%/bio/appl/hmmer/report.rb
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/mafft/report.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/psort/report.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/appl/sim4/report.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/sosui/report.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/appl/spidey/report.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/appl/targetp/report.rb
%%RUBY_SITELIBDIR%%/bio/appl/tmhmm/report.rb
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
%%RUBY_SITELIBDIR%%/bio/data/aa.rb
%%RUBY_SITELIBDIR%%/bio/data/codontable.rb
%%RUBY_SITELIBDIR%%/bio/data/na.rb
%%RUBY_SITELIBDIR%%/bio/db/aaindex.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/db/fantom.rb
%%RUBY_SITELIBDIR%%/bio/db/fasta.rb
%%RUBY_SITELIBDIR%%/bio/db/gff.rb
%%RUBY_SITELIBDIR%%/bio/db/go.rb
%%RUBY_SITELIBDIR%%/bio/db/litdb.rb
%%RUBY_SITELIBDIR%%/bio/db/medline.rb
%%RUBY_SITELIBDIR%%/bio/db/nbrf.rb
%%RUBY_SITELIBDIR%%/bio/db/pdb.rb
%%RUBY_SITELIBDIR%%/bio/db/prosite.rb
%%RUBY_SITELIBDIR%%/bio/db/rebase.rb
%%RUBY_SITELIBDIR%%/bio/db/transfac.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/db/embl/common.rb
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
%%RUBY_SITELIBDIR%%/bio/db/embl/embl.rb
%%RUBY_SITELIBDIR%%/bio/db/embl/sptr.rb
%%RUBY_SITELIBDIR%%/bio/db/embl/swissprot.rb
%%RUBY_SITELIBDIR%%/bio/db/embl/trembl.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/db/embl/uniprot.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/db/genbank/common.rb
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
%%RUBY_SITELIBDIR%%/bio/db/genbank/ddbj.rb
%%RUBY_SITELIBDIR%%/bio/db/genbank/genbank.rb
%%RUBY_SITELIBDIR%%/bio/db/genbank/genpept.rb
%%RUBY_SITELIBDIR%%/bio/db/genbank/refseq.rb
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/brite.rb
%%RUBY_SITELIBDIR%%/bio/db/kegg/cell.rb
%%RUBY_SITELIBDIR%%/bio/db/kegg/compound.rb
%%RUBY_SITELIBDIR%%/bio/db/kegg/enzyme.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/expression.rb
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/genes.rb
%%RUBY_SITELIBDIR%%/bio/db/kegg/genome.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/glycan.rb
Update to 0.3.2.
2001-11-28 14:46:31 +01:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/keggtab.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/kgml.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/ko.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/db/kegg/reaction.rb
%%RUBY_SITELIBDIR%%/bio/db/pdb/atom.rb
%%RUBY_SITELIBDIR%%/bio/db/pdb/chain.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/db/pdb/chemicalcomponent.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/db/pdb/model.rb
%%RUBY_SITELIBDIR%%/bio/db/pdb/pdb.rb
%%RUBY_SITELIBDIR%%/bio/db/pdb/residue.rb
%%RUBY_SITELIBDIR%%/bio/db/pdb/utils.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/io/das.rb
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
%%RUBY_SITELIBDIR%%/bio/io/dbget.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/io/ddbjxml.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/io/fastacmd.rb
Update to 0.3.5.
2002-03-13 00:12:03 +01:00
%%RUBY_SITELIBDIR%%/bio/io/fetch.rb
Update to 0.3.2.
2001-11-28 14:46:31 +01:00
%%RUBY_SITELIBDIR%%/bio/io/flatfile.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/io/higet.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%RUBY_SITELIBDIR%%/bio/io/keggapi.rb
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
%%RUBY_SITELIBDIR%%/bio/io/pubmed.rb
Update to 0.3.5.
2002-03-13 00:12:03 +01:00
%%RUBY_SITELIBDIR%%/bio/io/registry.rb
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
%%RUBY_SITELIBDIR%%/bio/io/soapwsdl.rb
Update to 0.3.5.
2002-03-13 00:12:03 +01:00
%%RUBY_SITELIBDIR%%/bio/io/sql.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%RUBY_SITELIBDIR%%/bio/io/flatfile/bdb.rb
%%RUBY_SITELIBDIR%%/bio/io/flatfile/index.rb
%%RUBY_SITELIBDIR%%/bio/io/flatfile/indexer.rb
%%RUBY_SITELIBDIR%%/bio/sequence/aa.rb
%%RUBY_SITELIBDIR%%/bio/sequence/common.rb
%%RUBY_SITELIBDIR%%/bio/sequence/compat.rb
%%RUBY_SITELIBDIR%%/bio/sequence/format.rb
%%RUBY_SITELIBDIR%%/bio/sequence/generic.rb
%%RUBY_SITELIBDIR%%/bio/sequence/na.rb
%%RUBY_SITELIBDIR%%/bio/shell/core.rb
%%RUBY_SITELIBDIR%%/bio/shell/demo.rb
%%RUBY_SITELIBDIR%%/bio/shell/interface.rb
%%RUBY_SITELIBDIR%%/bio/shell/object.rb
%%RUBY_SITELIBDIR%%/bio/shell/web.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/codon.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/emboss.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/entry.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/flatfile.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/keggapi.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/midi.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/obda.rb
%%RUBY_SITELIBDIR%%/bio/shell/plugin/seq.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/Rakefile
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/controllers/application.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/controllers/shell_controller.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/helpers/application_helper.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/models/shell_connection.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/views/layouts/shell.rhtml
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/views/shell/history.rhtml
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/views/shell/index.rhtml
%%RUBY_SITELIBDIR%%/bio/shell/rails/app/views/shell/show.rhtml
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/boot.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/database.yml
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/environment.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/routes.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/environments/development.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/environments/production.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/config/environments/test.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/doc/README_FOR_APP
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/404.html
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/500.html
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/dispatch.cgi
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/dispatch.fcgi
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/dispatch.rb
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/favicon.ico
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/index.html
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/robots.txt
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/images/icon.png
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/images/rails.png
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/javascripts/controls.js
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/javascripts/dragdrop.js
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/javascripts/effects.js
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/javascripts/prototype.js
%%RUBY_SITELIBDIR%%/bio/shell/rails/public/stylesheets/main.css
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/about
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/breakpointer
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/console
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/destroy
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/generate
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/plugin
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/runner
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/server
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/performance/benchmarker
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/performance/profiler
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/process/reaper
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/process/spawner
%%RUBY_SITELIBDIR%%/bio/shell/rails/script/process/spinner
%%RUBY_SITELIBDIR%%/bio/shell/rails/test/test_helper.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme.rb
%%RUBY_SITELIBDIR%%/bio/util/contingency_table.rb
%%RUBY_SITELIBDIR%%/bio/util/sirna.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/buried.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/helix.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/hydropathy.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/nucleotide.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/strand.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/taylor.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/turn.rb
%%RUBY_SITELIBDIR%%/bio/util/color_scheme/zappo.rb
@dirrm %%RUBY_SITELIBDIR%%/bio/util/color_scheme
@dirrm %%RUBY_SITELIBDIR%%/bio/util
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/test
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/script/process
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/script/performance
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/script
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/public/stylesheets
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/public/javascripts
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/public/images
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/public
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/doc
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/config/environments
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/config
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app/views/shell
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app/views/layouts
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app/views
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app/models
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app/helpers
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app/controllers
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails/app
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/rails
@dirrm %%RUBY_SITELIBDIR%%/bio/shell/plugin
@dirrm %%RUBY_SITELIBDIR%%/bio/shell
@dirrm %%RUBY_SITELIBDIR%%/bio/sequence
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/io/flatfile
@dirrm %%RUBY_SITELIBDIR%%/bio/io
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/db/pdb
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/db/kegg
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/db/genbank
@dirrm %%RUBY_SITELIBDIR%%/bio/db/embl
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/db
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/data
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/tmhmm
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/targetp
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/spidey
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/sosui
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/sim4
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/psort
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/mafft
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/hmmer
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/genscan
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/fasta
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/clustalw
Update to 0.6.2.
2004-12-25 18:52:46 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/blat
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/blast
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl/bl2seq
Update to 0.4.0.
2003-01-29 11:45:59 +01:00
@dirrm %%RUBY_SITELIBDIR%%/bio/appl
Add ruby-bio (BioRuby), an integrated environment for Bioinformatics written in Ruby.
2001-10-24 08:21:52 +02:00
@dirrm %%RUBY_SITELIBDIR%%/bio
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/any2fasta.rb
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/biofetch.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/color_scheme_na.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/dbget
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fasta2tab.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fsplit.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gb2fasta.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gb2tab.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gbtab2mysql.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/genes2nuc.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/genes2pep.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/genes2tab.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/genome2rb.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/genome2tab.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/goslim.rb
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gt2fasta.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pmfetch.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pmsearch.rb
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/psortplot_html.rb
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/ssearch2tab.rb
Update to 0.5.0.
2003-06-26 05:34:44 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/tdiary.rb
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/tfastx2tab.rb
%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vs-genes.rb
%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ChangeLog
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/README
- Update to 1.0.0 - Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-26 00:09:29 +02:00
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/KEGG_API.rd
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/Tutorial.rd
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/Changes-0.7.rd
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ja/BioRuby.rd.ja
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ja/Design.rd.ja
Update to 0.5.2.
2003-08-23 00:53:54 +02:00
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ja/KEGG_API.rd.ja
Use RUBY_MOD*.
2002-10-06 23:08:30 +02:00
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ja/TODO.rd.ja
%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ja/Tutorial.rd.ja
%%PORTDOCS%%@dirrm %%RUBY_MODDOCDIR%%/ja
%%PORTDOCS%%@dirrm %%RUBY_MODDOCDIR%%
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