2016-03-17 09:21:14 +01:00
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# Created by: Dan Siercks <dsiercks@uwm.edu>
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# $FreeBSD$
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PORTNAME= trimmomatic
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PORTVERSION= 0.35
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CATEGORIES= biology java
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MASTER_SITES= http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/
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DISTNAME= Trimmomatic-${PORTVERSION}
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2018-01-31 02:07:07 +01:00
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MAINTAINER= jwb@FreeBSD.org
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2016-03-17 09:21:14 +01:00
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COMMENT= Flexible read trimming tool for Illumina NGS data
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LICENSE= GPLv3
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USES= zip
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USE_JAVA= yes
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JAVA_VERSION= 1.6+
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JAVA_RUN= yes
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NO_BUILD= yes
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NO_ARCH= yes
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do-install:
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${INSTALL_DATA} ${WRKSRC}/trimmomatic-${PORTVERSION}.jar \
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${STAGEDIR}${JAVAJARDIR}/trimmomatic.jar
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cd ${WRKSRC} && ${COPYTREE_SHARE} adapters ${STAGEDIR}${DATADIR}
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.include <bsd.port.mk>
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