2013-09-20 17:55:44 +02:00
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# Created by: Bob Zimmermann <rpz@cse.wustl.edu>
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2006-09-29 06:05:55 +02:00
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# $FreeBSD$
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PORTNAME= gmap
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2015-10-27 19:49:48 +01:00
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PORTVERSION= 2015.09.21
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2006-09-29 06:05:55 +02:00
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CATEGORIES= biology
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2014-09-05 11:25:45 +02:00
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MASTER_SITES= http://research-pub.gene.com/gmap/src/
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2015-10-27 19:49:48 +01:00
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DISTNAME= ${PORTNAME}-gsnap-${PORTVERSION:C|\.|-|g}
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2006-09-29 06:05:55 +02:00
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2015-12-11 09:48:56 +01:00
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MAINTAINER= bacon4000@gmail.com
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2013-12-10 18:21:46 +01:00
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COMMENT= Genomic Mapping and Alignment Program for mRNA and EST Sequences
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2006-09-29 06:05:55 +02:00
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2015-10-27 19:49:48 +01:00
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LICENSE= GMAP
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LICENSE_NAME= GMAP License
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LICENSE_FILE= ${WRKSRC}/COPYING
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LICENSE_PERMS= dist-mirror pkg-mirror auto-accept
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2013-12-10 18:21:46 +01:00
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USES= gmake perl5
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2006-09-29 06:05:55 +02:00
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GNU_CONFIGURE= yes
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2015-10-27 19:49:48 +01:00
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WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION:C|\.|-|g}
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OPTIONS_DEFINE= SIMD
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SIMD_CONFIGURE_OFF= --disable-builtin-popcount --disable-simd
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2016-11-08 20:29:56 +01:00
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BROKEN_aarch64= Does not build: invokes x86 asm
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2016-11-08 04:40:15 +01:00
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BROKEN_mips64= Does not build: invokes x86 asm
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2015-12-13 17:07:27 +01:00
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BROKEN_powerpc64= Does not build on powerpc64
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2016-11-08 04:40:15 +01:00
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BROKEN_sparc64= Does not build: invokes x86 asm
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2015-12-13 17:07:27 +01:00
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2015-10-27 19:49:48 +01:00
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# shebang_fix operates during patch.
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# These scripts are created during configure.
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post-configure:
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${REINPLACE_CMD} -e 's|/usr/bin/perl|${PERL}|g' \
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${WRKSRC}/Makefile ${WRKSRC}/util/*.pl
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2007-04-16 23:18:53 +02:00
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.include <bsd.port.mk>
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