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science/coot: Update 0.8.9.1 -> 0.8.9.2

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* Add goocanvas dependency
* Add fftw dependency

Reported by:	portscout
This commit is contained in:
Yuri Victorovich 2019-04-03 05:01:11 +00:00
parent 6521bed65e
commit 1600a9fa31
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=497621
4 changed files with 37 additions and 9 deletions
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7
science/coot/Makefile
View file

@ -1,8 +1,7 @@
# $FreeBSD$
PORTNAME= coot
DISTVERSION= 0.8.9.1
PORTREVISION= 2
DISTVERSION= 0.8.9.2
CATEGORIES= science
MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/source/releases/ \
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/dependencies/:data
@ -15,11 +14,13 @@ COMMENT= Crystallographic Object-Oriented Toolkit
LICENSE= LGPL3
LICENSE_FILE= ${WRKSRC}/COPYING
BUILD_DEPENDS= fftw>0:math/fftw
LIB_DEPENDS= libccp4c.so:science/libccp4 \
libclipper-core.so:science/clipper \
libcurl.so:ftp/curl \
libfontconfig.so:x11-fonts/fontconfig \
libfreetype.so:print/freetype2 \
libgoocanvas.so:graphics/goocanvas \
libgtkglext-x11-1.0.so:x11-toolkits/gtkglext \
libgsl.so:math/gsl \
libmmdb2.so:science/mmdb2 \
@ -31,7 +32,7 @@ RUN_DEPENDS= bash:shells/bash
USES= desktop-file-utils fortran gettext-runtime gl gmake gnome libtool localbase:ldflags pkgconfig python:2.7 shebangfix sqlite
SHEBANG_FILES= src/coot.in
GNU_CONFIGURE= yes
CONFIGURE_ARGS= --enable-shared --disable-static
CONFIGURE_ARGS= --enable-shared --disable-static --with-goocanvas-prefix=${LOCALBASE}
USE_GNOME= atk cairo gdkpixbuf2 glib20 gtk20 libartlgpl2 libgnomecanvas pango pangox-compat
USE_GL= gl glu glut
USE_XORG= ice sm x11 xmu xt

6
science/coot/distinfo
View file

@ -1,6 +1,6 @@
TIMESTAMP = 1531013796
SHA256 (coot/coot-0.8.9.1.tar.gz) = 51b6faef11177a8ab682fbe28448f935ae1252ad53b4efa31339ff658a63ff94
SIZE (coot/coot-0.8.9.1.tar.gz) = 19360553
TIMESTAMP = 1554259683
SHA256 (coot/coot-0.8.9.2.tar.gz) = f24ed258e43ea31452b54c62649c071aa15f356d077dce0dab94eb04f27a6625
SIZE (coot/coot-0.8.9.2.tar.gz) = 19635513
SHA256 (coot/refmac-monomer-library.tar.gz) = 03562eec612103a48bd114cfe0d171943e88f94b84610d16d542cda138e5f36b
SIZE (coot/refmac-monomer-library.tar.gz) = 37439851
SHA256 (coot/reference-structures.tar.gz) = 44db38506f0f90c097d4855ad81a82a36b49cd1e3ffe7d6ee4728b15109e281a

5
science/coot/files/patch-src_cc-interface-image.hh
View file

@ -1,7 +1,8 @@
--- src/cc-interface-image.hh.orig 2018-07-08 02:10:49 UTC
--- src/cc-interface-image.hh.orig 2018-06-08 16:50:29 UTC
+++ src/cc-interface-image.hh
@@ -1,4 +1,5 @@
@@ -1,5 +1,6 @@
#ifdef USE_PYTHON
+#include <Python.h>
// make a png given the info in text_info_dict

28
science/coot/pkg-plist
View file

@ -24,11 +24,15 @@ include/coot/ccp4mg-utils/mgtree.h
include/coot/ccp4mg-utils/ppmutil.h
include/coot/ccp4mg-utils/quat.h
include/coot/compat/coot-getopt.h
include/coot/compat/coot-sysdep.h
include/coot/compat/getopt_int.h
include/coot/compat/sleep-fixups.h
include/coot/coords/Bond_lines.h
include/coot/coords/Bond_lines_ext.h
include/coot/coords/Cartesian.h
include/coot/coords/coot-close.hh
include/coot/coords/cos-sin.h
include/coot/coords/loop-path.hh
include/coot/coords/mmdb-crystal.h
include/coot/coords/mmdb-extras.h
include/coot/coords/mmdb.h
@ -89,10 +93,12 @@ include/coot/ideal/lograma.h
include/coot/ideal/model-bond-deltas.hh
include/coot/ideal/parallel-planes.hh
include/coot/ideal/pepflip.hh
include/coot/ideal/phi-psi.hh
include/coot/ideal/regularize-minimol.hh
include/coot/ideal/simple-restraint.hh
include/coot/ideal/test-indexing.hh
include/coot/ideal/torsion-bonds.hh
include/coot/ideal/zo-rama.hh
include/coot/lbg/alerts.hh
include/coot/lbg/graphics-c-interface-functions.hh
include/coot/lbg/lbg-drag-and-drop.hh
@ -260,6 +266,9 @@ lib/libcootilus.so.0.0.0
%%PYTHON_SITELIBDIR%%/coot/acedrg_link.py
%%PYTHON_SITELIBDIR%%/coot/acedrg_link.pyc
%%PYTHON_SITELIBDIR%%/coot/acedrg_link.pyo
%%PYTHON_SITELIBDIR%%/coot/add_linked_cho.py
%%PYTHON_SITELIBDIR%%/coot/add_linked_cho.pyc
%%PYTHON_SITELIBDIR%%/coot/add_linked_cho.pyo
%%PYTHON_SITELIBDIR%%/coot/americanisms.py
%%PYTHON_SITELIBDIR%%/coot/americanisms.pyc
%%PYTHON_SITELIBDIR%%/coot/americanisms.pyo
@ -299,6 +308,9 @@ lib/libcootilus.so.0.0.0
%%PYTHON_SITELIBDIR%%/coot/coot_lsq.py
%%PYTHON_SITELIBDIR%%/coot/coot_lsq.pyc
%%PYTHON_SITELIBDIR%%/coot/coot_lsq.pyo
%%PYTHON_SITELIBDIR%%/coot/coot_output_to_window.py
%%PYTHON_SITELIBDIR%%/coot/coot_output_to_window.pyc
%%PYTHON_SITELIBDIR%%/coot/coot_output_to_window.pyo
%%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.py
%%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.pyc
%%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.pyo
@ -320,6 +332,9 @@ lib/libcootilus.so.0.0.0
%%PYTHON_SITELIBDIR%%/coot/filter.py
%%PYTHON_SITELIBDIR%%/coot/filter.pyc
%%PYTHON_SITELIBDIR%%/coot/filter.pyo
%%PYTHON_SITELIBDIR%%/coot/find_baddies.py
%%PYTHON_SITELIBDIR%%/coot/find_baddies.pyc
%%PYTHON_SITELIBDIR%%/coot/find_baddies.pyo
%%PYTHON_SITELIBDIR%%/coot/fitting.py
%%PYTHON_SITELIBDIR%%/coot/fitting.pyc
%%PYTHON_SITELIBDIR%%/coot/fitting.pyo
@ -14126,6 +14141,7 @@ share/applications/coot.desktop
%%DATADIR%%/link-by-torsion-to-FUC-core-ALPHA1-2.tab
%%DATADIR%%/link-by-torsion-to-FUC-core-ALPHA1-3.tab
%%DATADIR%%/link-by-torsion-to-FUC-core-ALPHA1-6.tab
%%DATADIR%%/link-by-torsion-to-NAG-core-NAG-SER.tab
%%DATADIR%%/link-by-torsion-to-pyranose-core-ALPHA1-2.tab
%%DATADIR%%/link-by-torsion-to-pyranose-core-ALPHA1-3.tab
%%DATADIR%%/link-by-torsion-to-pyranose-core-ALPHA1-6.tab
@ -14183,13 +14199,14 @@ share/applications/coot.desktop
%%DATADIR%%/pixmaps/connect-to-oca.svg
%%DATADIR%%/pixmaps/connect-to-usf.svg
%%DATADIR%%/pixmaps/connect-to-world.svg
%%DATADIR%%/pixmaps/coot-0.8.9.1.png
%%DATADIR%%/pixmaps/coot-0.8.9.2.png
%%DATADIR%%/pixmaps/coot-favicon.png
%%DATADIR%%/pixmaps/coot-icon.png
%%DATADIR%%/pixmaps/coot-save-symm.png
%%DATADIR%%/pixmaps/coot-save.png
%%DATADIR%%/pixmaps/crosshairs.png
%%DATADIR%%/pixmaps/crosshairs.svg
%%DATADIR%%/pixmaps/curlew-long.png
%%DATADIR%%/pixmaps/delete.png
%%DATADIR%%/pixmaps/delete.svg
%%DATADIR%%/pixmaps/density-fit.svg
@ -14250,6 +14267,13 @@ share/applications/coot.desktop
%%DATADIR%%/pixmaps/pointer-distances.svg
%%DATADIR%%/pixmaps/probe-clash.svg
%%DATADIR%%/pixmaps/radacina_handcuffs-small.svg
%%DATADIR%%/pixmaps/rama2_all.png
%%DATADIR%%/pixmaps/rama2_gly.png
%%DATADIR%%/pixmaps/rama2_ileval.png
%%DATADIR%%/pixmaps/rama2_non_gly_pro.png
%%DATADIR%%/pixmaps/rama2_non_gly_pro_pre_pro_ileval.png
%%DATADIR%%/pixmaps/rama2_pre_pro.png
%%DATADIR%%/pixmaps/rama2_pro.png
%%DATADIR%%/pixmaps/rama_all.png
%%DATADIR%%/pixmaps/rama_gly.png
%%DATADIR%%/pixmaps/rama_non_gly_pro.png
@ -14391,6 +14415,7 @@ share/applications/coot.desktop
%%DATADIR%%/scheme/0-auto-rot.scm
%%DATADIR%%/scheme/3d-generator-import.scm
%%DATADIR%%/scheme/acedrg-link.scm
%%DATADIR%%/scheme/add-linked-cho.scm
%%DATADIR%%/scheme/americanisms.scm
%%DATADIR%%/scheme/background-demo.scm
%%DATADIR%%/scheme/bit.scm
@ -14415,6 +14440,7 @@ share/applications/coot.desktop
%%DATADIR%%/scheme/fascinating-things.scm
%%DATADIR%%/scheme/file-utils.scm
%%DATADIR%%/scheme/filter.scm
%%DATADIR%%/scheme/find-baddies.scm
%%DATADIR%%/scheme/fitting.scm
%%DATADIR%%/scheme/gap.scm
%%DATADIR%%/scheme/generic-objects.scm