graphics/mirtk: Update 2.0.0-42 -> 2.0.0-122

Add the TBB and VTK options.

graphics/mirtk/Makefile

@@ -2,9 +2,8 @@
 
 PORTNAME=	mirtk
 DISTVERSIONPREFIX=	v
-DISTVERSION=	2.0.0-42
+DISTVERSION=	2.0.0-122
-DISTVERSIONSUFFIX=	-g7390df6
+DISTVERSIONSUFFIX=	-g38210fa
-PORTREVISION=	3
 CATEGORIES=	graphics
 
 MAINTAINER=	yuri@FreeBSD.org
@@ -22,8 +21,20 @@ GH_ACCOUNT=	BioMedIA
 GH_PROJECT=	${PORTNAME:tu}
 USE_LDCONFIG=	yes
 
-post-stage: # https://github.com/BioMedIA/MIRTK/issues/674
+OPTIONS_DEFINE=		TBB VTK
+OPTIONS_DEFAULT=	TBB VTK
+
+TBB_DESC=		Build with TBB
+TBB_CMAKE_BOOL=		WITH_TBB
+TBB_LIB_DEPENDS=	libtbb.so:devel/tbb
+
+VTK_DESC=		Build with the VTK toolkit
+VTK_CMAKE_BOOL=		WITH_VTK
+VTK_LIB_DEPENDS=	libvtkCommonCore-9.0.so:math/vtk9 \
+			libexpat.so:textproc/expat2
+
+xpost-stage: # https://github.com/BioMedIA/MIRTK/issues/674
 	@${RM} ${STAGEDIR}${PREFIX}/bin/uninstall-mirtk
-	@${REINPLACE_CMD} -i '' 's|${STAGEDIR}||' ${STAGEDIR}${PREFIX}/lib/cmake/mirtk/MIRTKInstallManifest.txt
+	#@${REINPLACE_CMD} -i '' 's|${STAGEDIR}||' ${STAGEDIR}${PREFIX}/lib/cmake/mirtk/MIRTKInstallManifest.txt
 
 .include <bsd.port.mk>

graphics/mirtk/distinfo

@@ -1,3 +1,3 @@
-TIMESTAMP = 1559372079
+TIMESTAMP = 1602381309
-SHA256 (BioMedIA-MIRTK-v2.0.0-42-g7390df6_GH0.tar.gz) = 9f6103cf15d58e062245d8e349b2fe4963e23a587bbbf5c91a93c9a2541c0439
+SHA256 (BioMedIA-MIRTK-v2.0.0-122-g38210fa_GH0.tar.gz) = 272375ee397a7326cee5e39deebc366fc0e1fb29e8eef613824baddd8b56d110
-SIZE (BioMedIA-MIRTK-v2.0.0-42-g7390df6_GH0.tar.gz) = 2834975
+SIZE (BioMedIA-MIRTK-v2.0.0-122-g38210fa_GH0.tar.gz) = 2894640

graphics/mirtk/pkg-plist

@@ -221,6 +221,8 @@ include/mirtk/Matrix3x3.h
 include/mirtk/MaxStepLineSearch.h
 include/mirtk/MeanSquaredDisplacementError.h
 include/mirtk/Memory.h
+include/mirtk/MetaImageReader.h
+include/mirtk/MetaImageWriter.h
 include/mirtk/MirrorExtrapolateImageFunction.h
 include/mirtk/MultiLevelFreeFormTransformation.h
 include/mirtk/MultiLevelStationaryVelocityTransformation.h
@@ -364,7 +366,6 @@ lib/cmake/mirtk/MIRTKIOConfig.cmake
 lib/cmake/mirtk/MIRTKIOUse.cmake
 lib/cmake/mirtk/MIRTKImageConfig.cmake
 lib/cmake/mirtk/MIRTKImageUse.cmake
-lib/cmake/mirtk/MIRTKInstallManifest.txt
 lib/cmake/mirtk/MIRTKNumericsConfig.cmake
 lib/cmake/mirtk/MIRTKNumericsUse.cmake
 lib/cmake/mirtk/MIRTKRegistrationConfig.cmake
@@ -373,7 +374,6 @@ lib/cmake/mirtk/MIRTKTargets-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/mirtk/MIRTKTargets.cmake
 lib/cmake/mirtk/MIRTKTransformationConfig.cmake
 lib/cmake/mirtk/MIRTKTransformationUse.cmake
-lib/cmake/mirtk/MIRTKUninstall.cmake
 lib/cmake/mirtk/MIRTKUse.cmake
 lib/mirtk/libMIRTKCommon.so
 lib/mirtk/libMIRTKCommon.so.0
@@ -402,6 +402,7 @@ lib/mirtk/python/mirtk/batch/slurm.py
 lib/mirtk/python/mirtk/subprocess.py
 lib/mirtk/python/mirtk/utils.py
 lib/mirtk/tools/aggregate-images
+lib/mirtk/tools/auto-contrast
 lib/mirtk/tools/average-dofs
 lib/mirtk/tools/average-images
 lib/mirtk/tools/average-measure
@@ -419,6 +420,7 @@ lib/mirtk/tools/construct-atlas
 lib/mirtk/tools/convert-dof
 lib/mirtk/tools/convert-image
 lib/mirtk/tools/cut-brain
+lib/mirtk/tools/detect-cardiac-phases
 lib/mirtk/tools/detect-edges
 lib/mirtk/tools/dilate-image
 lib/mirtk/tools/downsample-image
@@ -428,6 +430,7 @@ lib/mirtk/tools/erode-image
 lib/mirtk/tools/evaluate-atlas
 lib/mirtk/tools/evaluate-dof
 lib/mirtk/tools/evaluate-jacobian
+lib/mirtk/tools/evaluate-label-overlap
 lib/mirtk/tools/evaluate-overlap
 lib/mirtk/tools/evaluate-similarity
 lib/mirtk/tools/extract-connected-components
@@ -441,6 +444,7 @@ lib/mirtk/tools/init-dof
 lib/mirtk/tools/invert-dof
 lib/mirtk/tools/match-histogram
 lib/mirtk/tools/open-image
+lib/mirtk/tools/random-dof
 lib/mirtk/tools/reflect-image
 lib/mirtk/tools/register
 lib/mirtk/tools/resample-image