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bio-mocha: Build plugin against bcftools 1.14, the current port

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This commit is contained in:
Jason W. Bacon 2021-12-21 10:16:29 -06:00
parent 2230392ed1
commit 7a9f4b317a
2 changed files with 7 additions and 5 deletions
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6
biology/bio-mocha/Makefile
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@ -1,17 +1,18 @@
PORTNAME= bio-mocha PORTNAME= bio-mocha
DISTVERSION= 1.13 DISTVERSION= 1.13
PORTREVISION= 1
CATEGORIES= biology CATEGORIES= biology
MASTER_SITES= https://software.broadinstitute.org/software/mocha/ MASTER_SITES= https://software.broadinstitute.org/software/mocha/
DISTFILES+= ${PORTNAME}_${DISTVERSION}-20211015.tar.gz DISTFILES+= ${PORTNAME}_${DISTVERSION}-20211015.tar.gz
MAINTAINER= jwb@FreeBSD.org MAINTAINER= jwb@FreeBSD.org
COMMENT= bcftools plugin for mosaic chromosomal alteration analysis COMMENT= Bcftools plugin for mosaic chromosomal alteration analysis
LICENSE= MIT LICENSE= MIT
LIB_DEPENDS= libhts.so:biology/htslib LIB_DEPENDS= libhts.so:biology/htslib
BUILD_DEPENDS= bash:shells/bash BUILD_DEPENDS= bash:shells/bash
RUN_DEPENDS= bcftools==${PORTVERSION}:biology/bcftools RUN_DEPENDS= bcftools>=${PORTVERSION}:biology/bcftools
USES= autoreconf gmake localbase perl5 python:env shebangfix USES= autoreconf gmake localbase perl5 python:env shebangfix
USE_GITHUB= yes USE_GITHUB= yes
@ -19,6 +20,7 @@ USE_PERL5= test
GH_ACCOUNT= samtools GH_ACCOUNT= samtools
GH_PROJECT= bcftools GH_PROJECT= bcftools
GH_TAGNAME= 1.14
GNU_CONFIGURE= yes GNU_CONFIGURE= yes
SHEBANG_FILES= misc/* test/test.pl SHEBANG_FILES= misc/* test/test.pl

6
biology/bio-mocha/distinfo
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@ -1,5 +1,5 @@
TIMESTAMP = 1638495618 TIMESTAMP = 1640100283
SHA256 (bio-mocha_1.13-20211015.tar.gz) = e145bb48fea347202e16395ab7d78e7e7314749b8d472a2071f8074004cd63a5 SHA256 (bio-mocha_1.13-20211015.tar.gz) = e145bb48fea347202e16395ab7d78e7e7314749b8d472a2071f8074004cd63a5
SIZE (bio-mocha_1.13-20211015.tar.gz) = 73627 SIZE (bio-mocha_1.13-20211015.tar.gz) = 73627
SHA256 (samtools-bcftools-1.13_GH0.tar.gz) = 55fbc674ec69e243052e9fb6560eb43d06f45f210e1842ba4dbe33acb394e562 SHA256 (samtools-bcftools-1.13-1.14_GH0.tar.gz) = c9a814b1f0a13af19b45283f039d01b524e011d870ac95cd92e6907c3d1db6d1
SIZE (samtools-bcftools-1.13_GH0.tar.gz) = 3133637 SIZE (samtools-bcftools-1.13-1.14_GH0.tar.gz) = 3326994