New port: science/clipper: Libraries for the organisation of crystallographic data
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parent
2e64ad29aa
commit
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svn2git
2021-03-31 03:12:20 +00:00
svn path=/head/; revision=474150
5 changed files with 145 additions and 0 deletions
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@ -44,6 +44,7 @@
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SUBDIR += chemtool
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SUBDIR += chemtool-devel
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SUBDIR += clhep
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SUBDIR += clipper
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SUBDIR += colt
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SUBDIR += crf++
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SUBDIR += dcl
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26
science/clipper/Makefile
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science/clipper/Makefile
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# $FreeBSD$
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PORTNAME= clipper
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DISTVERSION= 2.1.20180526
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CATEGORIES= science
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MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Libraries for the organisation of crystallographic data
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LICENSE= LGPL3
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LICENSE_FILE= ${WRKSRC}/COPYING
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LIB_DEPENDS= libccp4c.so:science/libccp4 \
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libmmdb2.so:science/mmdb2 \
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libsfftw.so:math/fftw-float
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USES= fortran gmake libtool localbase:ldflags
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GNU_CONFIGURE= yes
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CONFIGURE_ARGS= --enable-shared --disable-static \
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--enable-phs --enable-cns --enable-mmdb --enable-minimol --enable-cif --enable-ccp4 --enable-fortran
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USE_LDCONFIG= yes
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WRKSRC= ${WRKDIR}/${PORTNAME}-${DISTVERSION:C/\.[0-9]+$//}
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.include <bsd.port.mk>
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3
science/clipper/distinfo
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3
science/clipper/distinfo
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TIMESTAMP = 1531010900
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SHA256 (clipper-2.1.20180526.tar.gz) = 7b77d5c79078eb0ce94ea503c0346c799c44a2872dfd14b09abc404025003c4b
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SIZE (clipper-2.1.20180526.tar.gz) = 3007665
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8
science/clipper/pkg-descr
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science/clipper/pkg-descr
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The aim of the project is to produce a set of object-oriented libraries for the
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organisation of crystallographic data and the performance of crystallographic
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computation. The libraries are designed as a framework for new crystallographic
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software, which will allow the full power of modern programming techniques to be
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exploited by the developer. This will lead to greater functionality from simpler
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code which will be easier to develop and debug.
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WWW: https://www.ysbl.york.ac.uk/~cowtan/clipper/clipper.html
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science/clipper/pkg-plist
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107
science/clipper/pkg-plist
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include/clipper/ccp4/ccp4_map_io.h
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include/clipper/ccp4/ccp4_mtz_io.h
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include/clipper/ccp4/ccp4_mtz_types.h
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include/clipper/ccp4/ccp4_utils.h
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include/clipper/cif/cif_data_io.h
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include/clipper/clipper-ccp4.h
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include/clipper/clipper-cctbx.h
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include/clipper/clipper-cif.h
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include/clipper/clipper-cns.h
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include/clipper/clipper-contrib.h
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include/clipper/clipper-minimol.h
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include/clipper/clipper-mmdb.h
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include/clipper/clipper-phs.h
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include/clipper/clipper.h
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include/clipper/cns/cns_hkl_io.h
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include/clipper/cns/cns_map_io.h
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include/clipper/contrib/convolution_search.h
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include/clipper/contrib/edcalc.h
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include/clipper/contrib/fffear.h
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include/clipper/contrib/function_object_bases.h
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include/clipper/contrib/mapfilter.h
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include/clipper/contrib/originmatch.h
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include/clipper/contrib/sfcalc.h
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include/clipper/contrib/sfcalc_obs.h
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include/clipper/contrib/sfscale.h
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include/clipper/contrib/sfweight.h
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include/clipper/contrib/skeleton.h
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include/clipper/contrib/test_contrib.h
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include/clipper/core/atomsf.h
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include/clipper/core/cell.h
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include/clipper/core/clipper_instance.h
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include/clipper/core/clipper_memory.h
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include/clipper/core/clipper_message.h
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include/clipper/core/clipper_precision.h
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include/clipper/core/clipper_stats.h
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include/clipper/core/clipper_sysdep.h
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include/clipper/core/clipper_test.h
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include/clipper/core/clipper_thread.h
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include/clipper/core/clipper_types.h
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include/clipper/core/clipper_util.h
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include/clipper/core/container.h
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include/clipper/core/container_hkl.h
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include/clipper/core/container_map.h
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include/clipper/core/container_types.h
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include/clipper/core/coords.h
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include/clipper/core/derivs.h
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include/clipper/core/fftmap.h
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include/clipper/core/fftmap_sparse.h
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include/clipper/core/hkl_compute.h
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include/clipper/core/hkl_data.h
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include/clipper/core/hkl_datatypes.h
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include/clipper/core/hkl_info.h
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include/clipper/core/hkl_lookup.h
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include/clipper/core/hkl_operators.h
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include/clipper/core/map_interp.h
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include/clipper/core/map_utils.h
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include/clipper/core/nxmap.h
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include/clipper/core/nxmap_operator.h
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include/clipper/core/ramachandran.h
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include/clipper/core/resol_basisfn.h
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include/clipper/core/resol_fn.h
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include/clipper/core/resol_targetfn.h
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include/clipper/core/rotation.h
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include/clipper/core/spacegroup.h
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include/clipper/core/spacegroup_data.h
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include/clipper/core/symop.h
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include/clipper/core/test_core.h
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include/clipper/core/test_data.h
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include/clipper/core/xmap.h
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include/clipper/minimal-clipper-hkl.h
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include/clipper/minimal-clipper-map.h
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include/clipper/minimol/container_minimol.h
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include/clipper/minimol/minimol.h
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include/clipper/minimol/minimol_data.h
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include/clipper/minimol/minimol_io.h
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include/clipper/minimol/minimol_seq.h
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include/clipper/minimol/minimol_utils.h
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include/clipper/mmdb/clipper_mmdb.h
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include/clipper/phs/phs_io.h
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lib/libclipper-ccp4.so
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lib/libclipper-ccp4.so.2
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lib/libclipper-ccp4.so.2.0.1
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lib/libclipper-cif.so
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lib/libclipper-cif.so.2
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lib/libclipper-cif.so.2.0.1
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lib/libclipper-cns.so
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lib/libclipper-cns.so.2
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lib/libclipper-cns.so.2.0.1
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lib/libclipper-contrib.so
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lib/libclipper-contrib.so.2
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lib/libclipper-contrib.so.2.0.1
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lib/libclipper-core.so
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lib/libclipper-core.so.2
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lib/libclipper-core.so.2.0.1
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lib/libclipper-fortran.so
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lib/libclipper-fortran.so.2
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lib/libclipper-fortran.so.2.0.1
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lib/libclipper-minimol.so
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lib/libclipper-minimol.so.2
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lib/libclipper-minimol.so.2.0.1
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lib/libclipper-mmdb.so
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lib/libclipper-mmdb.so.2
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lib/libclipper-mmdb.so.2.0.1
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lib/libclipper-phs.so
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lib/libclipper-phs.so.2
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lib/libclipper-phs.so.2.0.1
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libdata/pkgconfig/clipper.pc
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