biology/kallisto: Update to 0.50.1,1

Update kallisto index version to 13
A few other new features
Changes: https://github.com/pachterlab/kallisto/releases

Reported by:    portscout
This commit is contained in:
Jason W. Bacon 2023-11-04 08:12:42 -05:00
parent 5868083c80
commit 8a2deaeb09
3 changed files with 14 additions and 5 deletions

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@ -1,7 +1,6 @@
PORTNAME= kallisto
DISTVERSIONPREFIX= v
DISTVERSION= 0.50.0
PORTREVISION= 2
DISTVERSION= 0.50.1
PORTEPOCH= 1
CATEGORIES= biology

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@ -1,3 +1,3 @@
TIMESTAMP = 1688395958
SHA256 (pachterlab-kallisto-v0.50.0_GH0.tar.gz) = f9cc0058d08206cb6dde4a4dcaf8a778df5a939a6e021508eea9b00b0d6d5368
SIZE (pachterlab-kallisto-v0.50.0_GH0.tar.gz) = 5939018
TIMESTAMP = 1698923323
SHA256 (pachterlab-kallisto-v0.50.1_GH0.tar.gz) = 030752bab3b0e33cd3f23f6d8feddd74194e5513532ffbf23519e84db2a86d34
SIZE (pachterlab-kallisto-v0.50.1_GH0.tar.gz) = 5947303

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@ -0,0 +1,10 @@
--- src/main.cpp.orig 2023-11-02 11:38:09 UTC
+++ src/main.cpp
@@ -11,6 +11,7 @@
#include <limits>
#include <cstdio>
+#include <unistd.h> // rmdir()
#include "common.h"
#include "ProcessReads.h"