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biology/seqkit: fix build on riscv64

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Bump golang.org/x/sys dependency to a version new enough
to support riscv64-freebsd.

Sponsored by:	Berliner Linux User Group e.V.
Approved by:	yuri (maintainer)
Differential Revision: https://reviews.freebsd.org/D39154
This commit is contained in:
Robert Clausecker 2023-03-17 17:29:20 +00:00
parent 28e926c6c1
commit bd71c9d3c6
2 changed files with 10 additions and 1 deletions
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7
biology/seqkit/Makefile
View file

@ -1,6 +1,7 @@
PORTNAME= seqkit
DISTVERSIONPREFIX= v
DISTVERSION= 2.4.0
PORTREVISION= 1
CATEGORIES= biology
MAINTAINER= yuri@FreeBSD.org
@ -11,12 +12,18 @@ LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE
USES= go:modules
USE_GITHUB= nodefault
GH_TUPLE= golang:sys:v0.6.0:sys
GO_MODULE= github.com/shenwei356/seqkit/v2
GO_TARGET= ./${PORTNAME}
PLIST_FILES= bin/${PORTNAME}
pre-patch:
${RM} -r ${WRKSRC}/vendor/golang.org/x/sys
${LN} -s ${WRKDIR}/sys-* ${WRKSRC}/vendor/golang.org/x/sys
do-test: # from https://bioinf.shenwei.me/seqkit/benchmark/
@cd ${WRKSRC}/tests && \
${GO_WRKDIR_BIN}/seqkit stat *.fa

4
biology/seqkit/distinfo
View file

@ -1,5 +1,7 @@
TIMESTAMP = 1679088879
TIMESTAMP = 1679152309
SHA256 (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.mod) = b2e9bfdf3899c8c4f9a736e0a18599ec36784db188fbce8c4dc1e578a7bfe2f8
SIZE (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.mod) = 2391
SHA256 (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.zip) = 31ac20c6354ff852b9cc3c5506e48154cbe76605e3f8961a7043f76533cee231
SIZE (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.zip) = 33905729
SHA256 (go/biology_seqkit/seqkit-v2.4.0/golang-sys-v0.6.0_GH0.tar.gz) = b4f6d17c7a128f76169964b437cb66b3f2dbf9a33361928ec19dfecf7b03fc54
SIZE (go/biology_seqkit/seqkit-v2.4.0/golang-sys-v0.6.0_GH0.tar.gz) = 1434234