Chase the upgrade of MPICH2.
PR: ports/151868 Approved by: maho (maintainer)
This commit is contained in:
Thierry Thomas
parent
08016c3ebb
commit
f9b73ccd0b
Notes:
svn2git
2021-03-31 03:12:20 +00:00
svn path=/head/; revision=264534
9 changed files with 117 additions and 29 deletions
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@ -7,7 +7,7 @@
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PORTNAME= blacs
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PORTVERSION= 1.7
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PORTREVISION= 12
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PORTREVISION= 13
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CATEGORIES= math
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MASTER_SITES= ftp://ftp.netlib.org/blacs/
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DISTNAME= BLACS
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@ -32,12 +32,11 @@ WITH_OPENMPI= yes
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.endif
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.if defined(WITH_OPENMPI)
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BUILD_DEPENDS= ${LOCALBASE}/mpi/openmpi/lib/libmpi.so:${PORTSDIR}/net/openmpi
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RUN_DEPENDS= ${LOCALBASE}/mpi/openmpi/bin/mpirun:${PORTSDIR}/net/openmpi
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BUILD_DEPENDS+= ${LOCALBASE}/mpi/openmpi/lib/libmpi.so:${PORTSDIR}/net/openmpi
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RUN_DEPENDS+= ${LOCALBASE}/mpi/openmpi/bin/mpirun:${PORTSDIR}/net/openmpi
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EXTRA_PATCHES+= ${FILESDIR}/Bmake.inc-openmpi.diff
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.else
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LIB_DEPENDS= mpich:${PORTSDIR}/net/mpich2
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RUN_DEPENDS= ${LOCALBASE}/bin/mpirun:${PORTSDIR}/net/mpich2
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LIB_DEPENDS+= mpich:${PORTSDIR}/net/mpich2
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EXTRA_PATCHES+= ${FILESDIR}/Bmake.inc-mpich.diff
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.endif
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@ -35,7 +35,7 @@
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MPILIBdir = $(MPIdir)/lib/
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MPIINCdir = $(MPIdir)/include
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- MPILIB = $(MPILIBdir)/libmpich.a
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+ MPILIB = $(MPILIBdir)/libmpich.a
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+ MPILIB = $(MPILIBdir)/libmpich.a $(MPILIBdir)/libmpl.a -pthread
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# -------------------------------------
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# All libraries required by the tester.
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@ -7,7 +7,7 @@
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PORTNAME= mbdyn
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PORTVERSION= 1.3.9
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PORTREVISION= 1
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PORTREVISION= 2
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CATEGORIES= science
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MASTER_SITES= http://www.aero.polimi.it/~masarati/Download/mbdyn/
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@ -51,9 +51,12 @@ LIB_DEPENDS+= lapack.4:${PORTSDIR}/math/lapack
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.if defined(WITH_MPI)
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LIB_DEPENDS+= mpich:${PORTSDIR}/net/mpich2
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CONFIGURE_ARGS+= --with-mpi=pmpi
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CPPFLAGS+= -I${LOCALBASE}/include -I${LOCALBASE}/include/mpi2c++
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LDFLAGS+= -L${LOCALBASE}/lib
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CONFIGURE_ARGS+= --with-mpi=yes --enable-schur
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CPPFLAGS+= -I${LOCALBASE}/include
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LDFLAGS+= "-L${LOCALBASE}/lib"
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. if !defined(WITH_METIS)
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WITH_CHACO= yes
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. endif
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.else
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CONFIGURE_ARGS+= --with-mpi=no
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.endif
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@ -1,16 +1,5 @@
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--- configure.in 2009-08-05 12:29:39.000000000 +0900
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+++ configure.in 2009-08-05 12:29:50.000000000 +0900
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@@ -765,7 +765,7 @@
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dnl Add fortran lib
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dnl
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case `basename "$F77"` in
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-gfortran)
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+gfortran*)
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F2C_LIBS="$F2C_LIBS -lgfortran"
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;;
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*)
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--- configure~ 2009-06-24 20:45:44.000000000 +0900
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+++ configure 2009-08-05 12:29:56.000000000 +0900
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--- configure.orig 2009-06-24 13:45:44.000000000 +0200
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+++ configure 2010-10-31 22:17:08.000000000 +0100
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@@ -27344,7 +27344,7 @@
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fi
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@ -20,3 +9,56 @@
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F2C_LIBS="$F2C_LIBS -lgfortran"
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;;
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*)
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@@ -33508,7 +33508,7 @@
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cat >>conftest.$ac_ext <<_ACEOF
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/* end confdefs.h. */
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$ac_includes_default
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-#include <$ac_header>
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+#include <mpi.h>
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_ACEOF
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rm -f conftest.$ac_objext
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if { (ac_try="$ac_compile"
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@@ -33548,7 +33548,7 @@
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cat confdefs.h >>conftest.$ac_ext
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cat >>conftest.$ac_ext <<_ACEOF
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/* end confdefs.h. */
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-#include <$ac_header>
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+#include <mpi.h>
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_ACEOF
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if { (ac_try="$ac_cpp conftest.$ac_ext"
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case "(($ac_try" in
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@@ -33643,7 +33643,7 @@
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elif test $ac_cv_header_mpicxx_h = yes ; then
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have_mpi_cxx_header=yes
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mpi_cxx_header="mpicxx.h"
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- try_mpi_LIBS="-lmpi -lmpi_cxx"
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+ try_mpi_LIBS="-lmpich -lmpichcxx -lmpl -pthread"
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fi
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if test $ac_cv_header_mpi_h = yes -a $have_mpi_cxx_header = yes ; then
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@@ -33655,7 +33655,6 @@
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ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
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ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
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- try_mpi_LIBS=
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save_LIBS=$LIBS
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cat >conftest.$ac_ext <<_ACEOF
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/* confdefs.h. */
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@@ -33664,7 +33663,7 @@
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cat >>conftest.$ac_ext <<_ACEOF
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/* end confdefs.h. */
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-#include <$mpi_cxx_header>
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+#include <mpi.h>
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int
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main ()
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@@ -33715,7 +33714,7 @@
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cat >>conftest.$ac_ext <<_ACEOF
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/* end confdefs.h. */
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-#include <mpi_cxx_header>
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+#include <mpi.h>
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int
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main ()
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11
science/mbdyn/files/patch-include__ac__mpi.h
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11
science/mbdyn/files/patch-include__ac__mpi.h
Normal file
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@ -0,0 +1,11 @@
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--- ./include/ac/mpi.h.orig 2009-01-04 19:04:54.000000000 +0100
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+++ ./include/ac/mpi.h 2010-10-31 22:31:57.000000000 +0100
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@@ -35,7 +35,7 @@
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#ifdef HAVE_MPI___H
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#include <mpi++.h>
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#elif defined HAVE_MPICXX_H
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-#include <mpicxx.h>
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+#include <mpi.h>
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#endif /* ! HAVE_MPI___H && ! HAVE_MPICXX_H */
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#endif /* MPI_H */
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12
science/mbdyn/files/patch-mbdyn__base__invsolver.cc
Normal file
12
science/mbdyn/files/patch-mbdyn__base__invsolver.cc
Normal file
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@ -0,0 +1,12 @@
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--- ./mbdyn/base/invsolver.cc.orig 2009-04-10 13:25:00.000000000 +0200
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+++ ./mbdyn/base/invsolver.cc 2010-10-31 23:14:49.000000000 +0100
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@@ -200,8 +200,8 @@
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}
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}
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-#ifdef USE_SCHUR
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int mpi_finalize = 0;
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+#ifdef USE_SCHUR
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int MyRank = 0;
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if (bParallel) {
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@ -1,5 +1,5 @@
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--- mbdyn/base/solver.cc.orig 2009-06-24 23:13:44.000000000 +0900
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+++ mbdyn/base/solver.cc 2009-08-05 11:32:29.000000000 +0900
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--- mbdyn/base/solver.cc.orig 2009-06-24 16:13:44.000000000 +0200
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+++ mbdyn/base/solver.cc 2010-10-31 23:38:30.000000000 +0100
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@@ -109,10 +109,17 @@
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};
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@ -18,3 +18,13 @@
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extern "C" void
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mbdyn_really_exit_handler(int signum)
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@@ -456,8 +463,8 @@
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}
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}
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-#ifdef USE_SCHUR
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int mpi_finalize = 0;
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+#ifdef USE_SCHUR
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int MyRank = 0;
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if (bParallel) {
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@ -7,7 +7,7 @@
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PORTNAME= mpqc
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PORTVERSION= 2.3.1
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PORTREVISION= 12
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PORTREVISION= 13
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CATEGORIES= science parallel
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MASTER_SITES= SF
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@ -74,6 +74,7 @@ CONFIGURE_ARGS+=--with-libs="-lsvml"
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.if defined(WITH_MPICH)
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CONFIGURE_ARGS+=--with-libdirs="-L${LOCALBASE}/lib -L${LOCALBASE}/lib"\
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--enable-always-use-mpi
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CONFIGURE_ENV+= PTHREAD_LIBS="${PTHREAD_LIBS}"
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.endif
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.if defined(WITH_MPICH)
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CONFIGURE_ARGS+=--with-include="-I${LOCALBASE}/include -I${WRKDIR} -I${LOCALBASE}/include"
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@ -1,5 +1,5 @@
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--- configure.in.orig 2006-03-23 03:04:54.000000000 +0900
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+++ configure.in 2007-11-11 14:37:20.000000000 +0900
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--- configure.in.orig 2006-03-22 19:04:54.000000000 +0100
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+++ configure.in 2010-10-28 00:09:59.000000000 +0200
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@@ -349,6 +349,31 @@
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ac_default_prefix="/usr/local/mpqc/$SC_VERSION"
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@ -165,7 +165,17 @@
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AC_CHECK_FUNC(pthread_attr_getstacksize)
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AC_CHECK_FUNC(pthread_attr_setstacksize)
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AC_CHECK_FUNC(pthread_attr_setscope)
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@@ -1769,10 +1793,10 @@
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@@ -1165,7 +1189,8 @@
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AC_CHECK_LIB(mpi,MPI_Init,[HAVE_MPI=yes;LIBS="-lmpi $LIBS"])
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fi
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if test "$HAVE_MPI" = no; then
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- AC_CHECK_LIB(mpich,MPI_Init,[HAVE_MPI=yes;LIBS="-lmpich $LIBS"])
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+ LIBS="-lmpl $PTHREAD_LIBS $LIBS"
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+ AC_CHECK_LIB(mpich,MPI_Init,[HAVE_MPI=yes;LIBS="-lmpich -lmpl $PTHREAD_LIBS $LIBS"])
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fi
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fi
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if test X$HAVE_MPI = Xyes; then
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@@ -1769,10 +1794,10 @@
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dnl --------- CCA component configuration ---------
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