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biology/py-biom-format: Update to version 2.1.8

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Upstream changes:
https://github.com/biocore/biom-format/releases/tag/2.1.8
This commit is contained in:
Joseph Mingrone 2020-09-25 01:03:03 +00:00
parent cdc8b9abdb
commit fd1ca09f9f
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=549977
2 changed files with 7 additions and 15 deletions
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16
biology/py-biom-format/Makefile
View file

@ -1,8 +1,7 @@
# $FreeBSD$
PORTNAME= biom-format
PORTVERSION= 2.1.7
PORTREVISION= 3
PORTVERSION= 2.1.8
CATEGORIES= biology python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@ -12,27 +11,20 @@ COMMENT= Biological Observation Matrix (BIOM) Format Project
LICENSE= BSD3CLAUSE
DEPRECATED= Uses deprecated version of python
EXPIRATION_DATE= 2020-08-15
BUILD_DEPENDS= ${PYNUMPY}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}click>0:devel/py-click@${PY_FLAVOR} \
${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}future>=0.16.0:devel/py-future@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scipy>=0.13.0:science/py-scipy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scipy>=1.3.1:science/py-scipy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pandas>=0.20.0:math/py-pandas@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}h5py>=2.2.0:science/py-h5py@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}six>=1.10.0:devel/py-six@${PY_FLAVOR}
USES= python:-3.6
USE_PYTHON= autoplist concurrent distutils
USES= python:3.6+
USE_PYTHON= autoplist concurrent cython distutils
.include <bsd.port.pre.mk>
.if ${PYTHON_REL} < 3000
RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}pyqi>0:devel/py-pyqi@${PY_FLAVOR}
.endif
post-extract:
${RM} -r ${WRKSRC}/tests

6
biology/py-biom-format/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1538769748
SHA256 (biom-format-2.1.7.tar.gz) = b47e54282ef13cddffdb00aea9183a87175a2372c91a915259086a3f444c42f4
SIZE (biom-format-2.1.7.tar.gz) = 11820666
TIMESTAMP = 1579317018
SHA256 (biom-format-2.1.8.tar.gz) = 4d8813f84f7a79ee8c367e6ef57e154a121198b3979b81c74e6514668b756827
SIZE (biom-format-2.1.8.tar.gz) = 12206773