From fee1d76936f6a36a27b271d0dbe7685b4fd84cc0 Mon Sep 17 00:00:00 2001 From: "Jason W. Bacon" Date: Wed, 18 Oct 2023 07:26:11 -0500 Subject: [PATCH] biology/bowtie2: Update to 2.5.2 A few bug fixes Changes: https://github.com/BenLangmead/bowtie2/releases Reported by: portscout --- biology/bowtie2/Makefile | 5 +++-- biology/bowtie2/distinfo | 6 +++--- 2 files changed, 6 insertions(+), 5 deletions(-) diff --git a/biology/bowtie2/Makefile b/biology/bowtie2/Makefile index 14777fb43760..88d57745908b 100644 --- a/biology/bowtie2/Makefile +++ b/biology/bowtie2/Makefile @@ -1,6 +1,6 @@ PORTNAME= bowtie2 DISTVERSIONPREFIX= v -DISTVERSION= 2.5.1 +DISTVERSION= 2.5.2 CATEGORIES= biology perl5 python MAINTAINER= jwb@FreeBSD.org @@ -10,8 +10,9 @@ WWW= https://github.com/BenLangmead/bowtie2 LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/LICENSE -# Requires a 64-bit processor and depends on hard-coded asm instructions ONLY_FOR_ARCHS= aarch64 amd64 powerpc64 powerpc64le +ONLY_FOR_ARCHS_REASON= Requires a 64-bit processor + RUN_DEPENDS= bash:shells/bash USES= gmake localbase:ldflags perl5 python shebangfix diff --git a/biology/bowtie2/distinfo b/biology/bowtie2/distinfo index 69c8b6900f9a..fd7a62f2ce84 100644 --- a/biology/bowtie2/distinfo +++ b/biology/bowtie2/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1674338476 -SHA256 (BenLangmead-bowtie2-v2.5.1_GH0.tar.gz) = 3fe00f4f89b5dd85fd9317e2168ec93f30dbb75d7950a08516c767d21eca7c27 -SIZE (BenLangmead-bowtie2-v2.5.1_GH0.tar.gz) = 10598627 +TIMESTAMP = 1697555094 +SHA256 (BenLangmead-bowtie2-v2.5.2_GH0.tar.gz) = 2f86dbfbf3dcb8521d559f830594fe28ac6e4c40d81313a8c2bfb17c82a501e0 +SIZE (BenLangmead-bowtie2-v2.5.2_GH0.tar.gz) = 10632647 SHA256 (simd-everywhere-simde-no-tests-f6a0b3b_GH0.tar.gz) = 9874f22afe8a6cd92770aa194df47db3d0963d80ea233a502b0d557f59763eb8 SIZE (simd-everywhere-simde-no-tests-f6a0b3b_GH0.tar.gz) = 397743