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Author SHA1 Message Date
Renato Botelho
0e1b5525a4 Update MASTER_SITES 
PR:		ports/106449
Submitted by:	Björn König <bkoenig@cs.tu-berlin.de> (maintainer)
 2006-12-30 14:44:36 +00:00
Maho Nakata
f64ff61007 Libint is a library for evaluating ERI (electron replusion integral) 
over Cartesian Gaussian fuctions for modern atomic and molecular theory;
esp. for science/mpqc and science/psi3.
 2006-12-29 07:41:44 +00:00
Ion-Mihai Tetcu
ad9e531be7 - Update to version 1.3.1 [1] 
- broken on 4.x

PR:		ports/107275 [1]
Submitted by:	Kay Lehmann (maintainer) [1]
 2006-12-28 18:39:55 +00:00
Mark Linimon
5977ae11ec Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response 
to email.

Hat:		portmgr
 2006-12-26 12:46:34 +00:00
Rong-En Fan
4361fa5f0f - Fix plist 
PR:		ports/107192
Submitted by:	Sunpoet Po-Chuan Hsieh <sunpoet at sunpoet.net> (maintainer)
 2006-12-25 15:29:35 +00:00
Martin Wilke
ad6b1685fd - Update MASTER_SITES 
- Fix build with gcc 4.X

PR:		ports/107117
Submitted by:	Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net> (maintainer)
 2006-12-23 22:22:45 +00:00
Ying-Chieh Liao
a941f3b092 add linsmith 0.99.3 
Smith charting program
 2006-12-22 03:38:47 +00:00
Martin Wilke
fe34565a0e - Update to 2.2 
PR:		ports/106833
Submitted by:	David <yeti@gwyddion.net> (maintainer)
 2006-12-21 19:57:20 +00:00
Rong-En Fan
63e91a9282 - Reformat pkg-message 
- Show pkg-message when install via ports

PR:		ports/106885
Submitted by:	Sunpoet Po-Chuan Hsieh <sunpoet at sunpoet.net> (maintainer)
 2006-12-19 02:28:19 +00:00
Ying-Chieh Liao
a5f77d8151 upgrade to 1.0.6 
PR:		106849
Submitted by:	maintainer
 2006-12-18 05:41:16 +00:00
Thierry Thomas
055a2a5107 Define WITH_FORTRAN on -CURRENT. 2006-12-13 23:23:58 +00:00
Rong-En Fan
70cdf57460 - Fix build 
Approved by:	maho (maintainer, implicit)
 2006-12-12 08:30:32 +00:00
Rong-En Fan
9ffc9ef7c5 - Respect X11BASE in one more place 
paraview has a ship-in TclTk, which also needs special care

Reported by:	pointyhat
 2006-12-12 02:55:42 +00:00
Cheng-Lung Sung
3b3c5679c3 - Update to 0.07 
- I'll handle this port.

PR:		ports/106519
Submitted by:	Gea-Suan Lin <gslin@gslin.org>
 2006-12-11 05:29:29 +00:00
Thierry Thomas
77945bb9d6 Unmark BROKEN: fixed with gcc-withfortran-4.1.2_20061208. 2006-12-10 22:44:08 +00:00
Shaun Amott
b804fe9316 Fix build on ia64 and sparc64. 
PR:		ports/106303
Submitted by:	Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net> (maintainer)
 2006-12-09 22:47:43 +00:00
Cheng-Lung Sung
583c35f6d9 - Update to 0.45 2006-12-09 06:19:56 +00:00
Rong-En Fan
7ba00ff677 - Use PYNUMPY 
Approved by:	Diane Bruce (maintainer, implicit)
 2006-12-08 12:12:08 +00:00
Rong-En Fan
1e126a53d6 - Respect X11BASE 
Submitted by:	maintainer
 2006-12-05 17:09:15 +00:00
Frank J. Laszlo
a65c8fb9fb Patch is needed for <= 600000 
Reported by:	sunpoet@sunpoet.net (maintainer)
 2006-12-05 12:20:26 +00:00
Erwin Lansing
a6940d0fbd - Deprecate 
- Set EXPIRATION_DATE

PR:		106338
Submitted by:	gabor
 2006-12-04 21:52:40 +00:00
Frank J. Laszlo
7e15092dd0 Fix build on 5.x. 
pthread_condattr_getpshared() and pthread_mutexattr_getpshared() were not introduced to FreeBSD 5.

PR:		ports/106289
Submitted by:	Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net> (maintainer)
 2006-12-04 16:00:06 +00:00
Maho Nakata
cf820e116c Fix pkg-plist 
Submitted by:	kris
 2006-12-01 22:37:11 +00:00
Rong-En Fan
8aa99bb810 - Fix LATEST_LINK 
Reported by:	kris
Approved by:	maintainer via irc
 2006-12-01 14:22:02 +00:00
Frank J. Laszlo
3105b28d41 Respect X11BASE 
Reported by:	pointyhat
 2006-12-01 14:14:47 +00:00
Frank J. Laszlo
66a3a81138 Respect X11BASE 
PR:	ports/106101
Submitted by:	self
Approved by:	Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
Reported by:	pointyhat
 2006-12-01 14:07:50 +00:00
Pav Lucistnik
d750615763 - Use features of bsd.wx.mk, especially USE_WX 
PR:		ports/101613
Submitted by:	alepulver
 2006-12-01 07:39:02 +00:00
Kris Kennaway
d7f23620fd BROKEN: Configure fails 2006-11-30 23:25:35 +00:00
Maho Nakata
01f1c535cb Fix pkg-plist 
Submitted by:	kris
 2006-11-30 04:44:31 +00:00
Maho Nakata
db7b52d82c Update to 2.10. 2006-11-30 04:39:29 +00:00
Maho Nakata
f19aa6d2b0 Update to 2.1.0 
* dependency to ATLAS is now conditional.
 2006-11-30 01:12:10 +00:00
Maho Nakata
dc6e867349 Add USE_LDCONFIG. 2006-11-30 00:57:58 +00:00
Maho Nakata
fc6b70fcd1 Now install shared libs as well (to prevent to pass -fPIC when 
creating a static lib. to workaround esp. for amd64).
 2006-11-29 21:40:05 +00:00
Martin Wilke
3ae32465cd - Respect X11BASE 
PR:		ports/105909
Submitted by:	trasz
 2006-11-28 07:43:19 +00:00
Rong-En Fan
a61687a6f7 - Fix build on big-endian platform 
Reported by:	pointyhat via kris
Submitted by:	David Necas (Yeti) <yeti at gwyddion.net> (maintainer)
 2006-11-26 05:55:58 +00:00
Martin Wilke
9bbe540450 - Respect X11BASE 
PR:		105829
Submitted by:	trasz
 2006-11-24 22:11:03 +00:00
Emanuel Haupt
40b465290e Update master site. 
Approved by:	tarzeau@linuks.mine.nu (maintainer)
 2006-11-21 15:23:19 +00:00
Dirk Meyer
ae649592f5 - cleanup pkg-plist 2006-11-19 10:50:43 +00:00
Maho Nakata
bbe57b83a1 * Use BLAS instead of ATLAS if ATLAS doesn't exist. 
* mpich part of mpqc-mpich is moved into mpqc port.
* now use mpich2 instead of mpich.
 2006-11-19 08:42:07 +00:00
Rong-En Fan
857d0ec9bd - Update to 2.83 
- Use SUB_FILES
- Use ECHO_CMD where I mean echo command
 2006-11-18 12:52:04 +00:00
Rong-En Fan
311cb2199d - numpy provides f2py now and conflicts f2py. Remoe f2py from dependency. 
Approved by:	Diane Bruce (maintainer)
 2006-11-15 23:38:52 +00:00
Rong-En Fan
971a317962 - Reflect repocopy ofscience/py-scipy -> science/py-scipy03 2006-11-15 05:54:59 +00:00
Rong-En Fan
5a775fa809 - Update to 0.5.1 
- Depends on newer NumPy
- Depends on wxPython either 2.4 or 2.6

PR:		ports/103830
Submitted by:	Li-Lun Wang
Approved by:	Diane Bruce (maintainer)
 2006-11-15 05:54:00 +00:00
Rong-En Fan
5a2e52b0f9 - Update to 2.1 
PR:		ports/105224
Submitted by:	David Ne&#269;as (maintainer)
 2006-11-08 00:21:06 +00:00
Martin Wilke
f3d1535df5 - Update to 0.89 
PR:		ports/105035
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Sponsored by:   FreeBSD Bug-a-thon #2
 2006-11-04 23:57:18 +00:00
Cheng-Lung Sung
dc126edc62 - Update to 0.7.0b 
- from Changes
  * fixed a bug in reestimate_setlambda
 2006-11-02 09:25:57 +00:00
Cheng-Lung Sung
0f1a946214 - Update to 1.2.2 
PR:		ports/104262
Submitted by:	maintainer (Shin'ya Murakami)
 2006-11-02 06:50:03 +00:00
Cheng-Lung Sung
6823b3a494 - Update to 0.5.3 
PR:		ports/104355
Submitted by:	maintainer (Shin'ya Murakami)
 2006-10-31 15:24:47 +00:00
Alejandro Pulver
1e3d770e7a - Update to 5.3.2. 
PR:		ports/104241
Submitted by:	Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
 2006-10-31 02:18:58 +00:00
Thierry Thomas
a0bd024333 Set "-source 1.4" to make it build with JDK-1.5, hence make it 
packageable.

Approved by:	portmgr (erwin)
 2006-10-26 20:15:08 +00:00
Kris Kennaway
1b1a8050b0 BROKEN: Incorrect pkg-plist 
Approved by:    portmgr (self)
 2006-10-15 20:06:03 +00:00
Joe Marcus Clarke
29747f458a Chase the GNOME X11BASE to LOCALBASE move, and fix the build with the 
new freetype2 where needed.

Submitted by:	mezz, ahze, pav, and many others
Approved by:	portmgr (implicit, kris)
 2006-10-14 08:54:54 +00:00
Cheng-Lung Sung
d951c72be1 The distfiles for science/libctl 3.0.1 are no longer available on the project's site. Updating to 3.0.2 fixes this issue. 
PR:		ports/104213
Submitted by:	Josh Paetzel <josh_AT_tcbug dot org>
 2006-10-09 16:17:31 +00:00
Pav Lucistnik
5b2bbe5d5a - Fix OPTIONS 
Pointy hat to:	xride
Submitted by:	maintainer
 2006-10-07 23:56:10 +00:00
Soeren Straarup
f8f3d1505a depends on atlas when it could also be built with lapack/blas instead 
this diff adds an OPTION knob to allow selection at compile time.

PR:		104077
Submitted by:	maintainer
Approved by:	tmclaugh (mentor)
 2006-10-07 17:16:43 +00:00
Pav Lucistnik
600c6a6eca - Update to 1.0.2 
- Unbreak

PR:		ports/104091
Submitted by:	Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net> (maintainer)
 2006-10-07 09:59:52 +00:00
Jose Alonso Cardenas Marquez
b3c25d9937 - Update devel/ode to 0.7 
- Bump PORTREVISION of all ports that depend of devel/ode [1]

Approved by:	thierry, Dmitry Marakasov <amdmi3__at__mail.ru> (maintainers) [1]
 2006-10-06 15:43:29 +00:00
Cheng-Lung Sung
7f2c75738d - Update to 2.0 
PR:		ports/103903
Submitted by:	maintainer <yeti_AT_gwyddion dot net>
 2006-10-04 07:59:58 +00:00
Cheng-Lung Sung
6bfb583a7d Add g3data 1.5.0, utility for extracting data from graphs. 
PR:		ports/103397
Submitted by:	trasz <trasz at pin.if.uz.zgora.pl>
 2006-10-02 08:59:12 +00:00
Mark Linimon
a245fe1498 * Split bsd.port.mk pre and post includes into 3 pieces instead of 2, to 
allow OPTIONS to be able to influence dependencies.  This is still
  experimental [1]

* Teach bsd.gcc.mk about gfortran [2]

* Remove the outdated emulators/linux_base; the new default has been
  linux_base-fc4.  This will allow the outdated port to be removed [3]

* Add USE_FIREBIRD macros to bsd.database.mk [4]

PR:	93687 [1], 93690 [2], 103184 [3], 103357 [4]

Submitted by:	shaun [1], Pedro F. Giffuni <giffunip at asme to org> [2],
		gerald [2], thierry [2], vd [3], skv [4]
 2006-09-30 19:25:46 +00:00
Dirk Meyer
fe0bd7cc5e Paje is a graphical tool that displays traces produced during the 
execution of multithreaded programs. Other programs can also generate
traces for this tool.
PR:		103677
Submitted by:	Gürkan Sengün
 2006-09-28 19:17:57 +00:00
Thierry Thomas
2b467068de Add a spac64 binary, built by shaun. 2006-09-27 21:06:58 +00:00
Dirk Meyer
eed872d5b2 GTAMS Analyzer is a complete coding and analysis package. It is a "port" of 
TAMS Analyzer for Macintosh OS X. Note, at some point the two projects will
have identical file formats, at which point  the initial G (for GNUstep)
will be dropped. GTAMS stands for GNUstep Text Analysis Markup System, it
is a convention for identifying themes in text. The software offers a wide
range of tools for applying themes to texts and identifying patterns of
themes within and between texts.
PR:		103680
Submitted by:	Gürkan Sengün
 2006-09-27 19:59:46 +00:00
Thierry Thomas
7c1f60f847 Update location. 
Submitted by:	Pascal Frey <frey (at) ann.jussieu.fr> (author)
 2006-09-26 17:09:47 +00:00
Thierry Thomas
f4613decce Add binaries (not tested) for amd64 (built by vd) and ia64 (built with 
help from marcel).
 2006-09-26 05:29:50 +00:00
Thierry Thomas
bf460149a7 Medit is an interactive mesh visualization software, developed by the Gamma 
project at INRIA-Rocquencourt.

It is intended to display computation results (in mechanics of the solids or
fluids, thermics, electromagnetism, etc.) on grids 2d (triangles and
quadrangles), 3d (tetrahedrons or hexahedrons) or surfaces (triangles and
quandrangles).
 2006-09-24 23:09:26 +00:00
Pav Lucistnik
dfa14d726d - Fix plugins 
- Update to 2006.06.30.1332

PR:		ports/103318
Submitted by:	Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
 2006-09-24 18:24:09 +00:00
Pav Lucistnik
1c3a2a9cc4 - Update to 0.6.6 2006-09-18 12:38:39 +00:00
Pav Lucistnik
5898fe1f05 - Update to 0.6.3 2006-09-18 12:38:25 +00:00
Cheng-Lung Sung
7914d359f5 - change MASTER_SITES 2006-09-18 03:12:26 +00:00
Kris Kennaway
fa6485d639 BROKEN: Does not build 2006-09-17 01:38:17 +00:00
Thierry Thomas
3652f10ed1 Fix the build with mpich2. 
Reported by:	pointyhat via Kris
 2006-09-15 05:45:32 +00:00
Thierry Thomas
7d5bf5a502 Upgrade to 3.2.1. 
Changelog at
<http://www-drfmc.cea.fr/sp2m/L_Sim/V_Sim/changelog.en.html#3.2>.
 2006-09-11 20:09:12 +00:00
Rong-En Fan
67d7bd9787 - Update to 1.99.9 
PR:		ports/103099
Submitted by:	David Ne&#270;as <yeti@gwyddion.net> (maintainer)
 2006-09-11 18:51:01 +00:00
Pav Lucistnik
07bb6c3560 - Update to 0.6.2 2006-09-07 16:40:40 +00:00
Alejandro Pulver
c66048c71e ITK is an open-source software toolkit for performing registration and 
segmentation. Segmentation is the process of identifying and classifying
data found in a digitally sampled representation. Typically the sampled
representation is an image acquired from such medical instrumentation as
CT or MRI scanners. Registration is the task of aligning or developing
correspondences between data. For example, in the medical environment,
a CT scan may be aligned with a MRI scan in order to combine the
information contained in both.

WWW: http://www.itk.org

Port maintainer: Jason W. Bacon
		 bacon@smithers.neuro.mcw.edu

PR:		ports/95166
Submitted by:	bacon at smithers.neuro.mcw.edu
 2006-09-07 01:24:33 +00:00
Kris Kennaway
51d481bd21 NO_PACKAGE and NO_CDROM are superfluous here 2006-09-03 17:34:12 +00:00
Cheng-Lung Sung
22c8556cc7 - update to 0.5.2 
PR:		ports/102677
Submitted by:	maintainer (Shin'ya Murakami)
 2006-09-02 13:08:23 +00:00
Eric Anholt
34e18e41a2 Update to 2.4.4, and drop maintainership since I'm not giving this port the 
love it needs.

PR:		ports/101533
Submitted by:	thierry
 2006-09-01 06:22:21 +00:00
Pav Lucistnik
19e7da9d49 - Mark IGNORE for Atlas installation without WITH_STATICLIB option 
PR:		ports/100600
Submitted by:	Diane Bruce <db@db.net> (maintainer)
 2006-08-28 21:21:16 +00:00
Martin Wilke
a8ab84d6c0 - Pass maintainership to submitter 
PR:		ports/102372
Submitted by:	Tony Maher <tonymaher(at)optusnet.com.au>
Approved by:	krion (mentor)
 2006-08-23 12:32:53 +00:00
Cheng-Lung Sung
1761140b36 - Update to 0.44 2006-08-22 07:19:28 +00:00
Thierry Thomas
d8b30d9b95 - Upgrade net/lam to 7.1.2 and remove net/lam7; 
- Chase lam7 -> lam in the dependent ports;

- Mark math/freemat IGNORE if WITH_MPI is defined and add a note about
  FreeMat 2.0 and QT4.
 2006-08-21 20:50:50 +00:00
Rong-En Fan
b780c69f8d - Add readline as dependency when it was already installed. The program 
will be linked against it anyway, not against a system one.
- Update icons cache
- Replace deprecated variable: INSTALLS_SHLIB by USE_LDCONFIG

PR:		ports/101443
Submitted by:	Stanislav Sedov <ssedov at mbsd.msk.ru>
Approved by:	Kay Lehmann <kay_lehmann at web.de> (maintainer)
 2006-08-20 10:48:09 +00:00
Kris Kennaway
77b2a1f73c Now builds 2006-08-17 12:38:09 +00:00
Cheng-Lung Sung
e15e2b4bb1 - s,INSTALLS_SHLIB,USE_LDCONFIG,g 
PR:		ports/101916
Submitted by:	Gea-Suan Lin <gslin_AT_gslin dot org>
 2006-08-15 01:45:58 +00:00
Cheng-Lung Sung
147fdee482 - s,INSTALLS_SHLIB,USE_LDCONFIG,g 
- these include misc/ multimedia/ net/ net-mgmt/ net-im/
  net-p2p/ palm/ print/ science/ maintained by ports@

PR:		ports/101916
Submitted by:	Gea-Suan Lin <gslin_AT_gslin dot org>
 2006-08-15 00:56:24 +00:00
Cheng-Lung Sung
b842f2bde8 - Fix build on AMD64 
- Use USE_LDCONFIG
- bump PORTREVISION

PR:		ports/101917
Submitted by:	maintainer (Gea-Suan Lin)
 2006-08-14 02:35:15 +00:00
Rong-En Fan
89e3944463 - Respect DESTDIR 
PR:		ports/101874
Submitted by:	Gea-Suan Lin <gslin at gslin.org>
 2006-08-13 15:40:37 +00:00
Pav Lucistnik
7a5942d62c Gwyddion is a modular SPM (Scanning Probe Microsopy) data visualization and 
analysis tool written with Gtk+.

It can be used for all most frequently used data processing operations
including: leveling, false color plotting, shading, filtering, denoising, data
editing, integral transforms, grain analysis, profile extraction, fractal
analysis, and many more.  The program is primarily focused on SPM data analysis
(e.g. data obtained from AFM, STM, NSOM, and similar microscopes).  However, it
can also be used for analysis of SEM (Scanning Electron Microscopy) data or any
other 2D data.

WWW: http://gwyddion.net/

PR:		ports/101773
Submitted by:	David Necas <yeti@gwyddion.net>
 2006-08-12 22:34:57 +00:00
Cheng-Lung Sung
991c434809 - update to 0.43 2006-08-08 04:12:22 +00:00
Cheng-Lung Sung
8a8a8d50aa - fix on i386 4 
Noted by:	krisbot
 2006-08-07 02:40:38 +00:00
Maho Nakata
af5d2b012b Deinstall certain files (isn't listed in /etc/mtree/BSD.local.dist). 
Make use of EXAMPLESDIR in pkg-plist

PR:		101484
Submitted by:	Stanislav Sedov <ssedov@mbsd.msk.ru>
 2006-08-07 01:21:53 +00:00
Cheng-Lung Sung
2d27cd587d Add p5-Algorithm-SVMLight 0.05, perl interface to SVMLight 
Machine-Learning Package.

PR:		ports/101297
Submitted by:	Gea-Suan Lin <gslin at gslin.org>
 2006-08-03 07:29:03 +00:00
Cheng-Lung Sung
4eedc08959 - Fix library 
- Use NO_WRKSUBDIR=yes instead of WRKSRC=${WRKDIR}
- bump PORTREVISION

PR:		ports/101302
Submitted by:	maintainer (Gea-Suan Lin)
 2006-08-03 07:07:22 +00:00
Cheng-Lung Sung
621b506e07 - Install header files 
- bump PORTREVISION

PR:		ports/101295
Submitted by:	maintainer (Gea-Suan Lin)
 2006-08-03 03:24:34 +00:00
Shaun Amott
0b83f4c142 - Upgrade to 2.0.2 [1] 
- portlint(1) tweak

PR:		ports/101196
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
 2006-08-01 19:05:03 +00:00
Cheng-Lung Sung
5eebe8264d Add svmlight 6.01, an implementation of Support Vector Machines (SVMs) 
in C.

PR:		ports/100944
Submitted by:	Gea-Suan Lin <gslin at gslin.org>
 2006-08-01 15:07:54 +00:00
Cheng-Lung Sung
257561329d Add crf++ 0.42, yet Another CRF toolkit. 
PR:		ports/100909
Submitted by:	Cheng-Lung Sung <clsung at FreeBSD.org>
 2006-07-28 03:38:04 +00:00
Cheng-Lung Sung
0b8041f700 Add ghmm 0.7.0a, general Hidden Markov Model Library in C. 
PR:		ports/100886
Submitted by:	Cheng-Lung Sung <clsung at FreeBSD.org>
 2006-07-28 03:36:25 +00:00