an zeising, kwm, miwi, bapt, eadler production:
Xorg 7.7
Starring:
xserver 1.12.4 (new xorg only)
Mesa 8.0.4, including libGL, libGLU and dri (new xorg only)
libX11 1.5.0
libxcb 1.9
libdrm 2.4.42 (new xorg only)
freeglut 2.8.1
Also starring:
Updates to drivers and other libraries and utilities
Additional notes:
Change pkgconf to be a build dependency.
Add a new USE_XORG, xcb, to depend on libxcb and update all ports to use
this.
Trim makefile headers.
Take maintanership of x11/xcb-proto, ok'd by ashish.
If you are running WITH_NEW_XORG=, you need to rebuild all installed
drivers, see UPDATING for more information.
Various fixes to make ports compile.
PR: ports/177942
Exp-run by: miwi
Approved by: portmgr (miwi)
Thanks to all who helped testing!
This setting has not had any effect since r1.13 to bsd.cmake.mk, as it
was only useful when we supported FreeBSD < 7.
Approved by: avilla (mentor), portmgr (miwi)
Feature safe: yes
package allowing the following:
* User-specific atom definitions and polymer chemistry definitions;
* Powerful sequence editing with user-defined glyphs for each monomer
and monomer chemical modification. Multi-region selections;
* Polymer sequence chemical/enzymatic cleavage;
* Intramolecular cross-linking, like disulfide bonds with total resolution
of the peptides generated upon enzymatic cleavage;
* Gas-phase fragmentation of oligomers;
* Mass-to-charge ratio calculations with inline change of ionization agent;
* Calculation of net electrical charge and of isoelectric point (even by
taking into account monomer modifications if polymer is a protein);
* Simulation of isotopic patterns for any chemical formula and z charge;
* A number of plugins allow 1) translation of the sequence from one format
to another (using a dictionary, like between the 1-letter code and the 3-letter
code of proteins) 2) conversion of number format according to any localized
number format 3) sort mass lists.
PR: ports/146564
Submitted by: Gvozdikov Veniamin <g.veniamin@googlemail.com>
