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Author SHA1 Message Date
Muhammad Moinur Rahman
219a0f8115 biology/seaview: Update version 4.5.3.4=>4.5.4 
- Remove dependency for libpdf as removed by upstream
 2015-03-24 10:15:30 +00:00
Muhammad Moinur Rahman
da8394e59b biology/seaview: UNBREAK 
- Update version 4.5.2=>4.5.3.4
- Add LICENSE (GPLv3)
- Remove PDFLIBS as OPTIONS as it is no loner an optional requirement

PR:		198602
Submitted by:	pi
Approved by:	bapt marino (implicit)
 2015-03-16 12:07:49 +00:00
Antoine Brodin
9939b90892 Mark BROKEN: Fails to link, tries to use internal fltk symbols 
c++ -o seaview   seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o Fl_Native_File_Chooser_FLTK.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o  \
      -L/usr/local/lib -lfltk_images -lfltk  \
     -lXft -lXext -lfontconfig -ljpeg -lpng -lXinerama -L/usr/local/lib -lpdf \
         -lX11 -lm -lz -pthread
seaview.o: In function `clipboard_contains_alignment(char const*)':
seaview.cxx:(.text+0x1c14): undefined reference to `fl_selection_buffer'

Reported by:	pkg-fallout
 2015-02-21 07:35:32 +00:00
Muhammad Moinur Rahman
6d2e8f9aeb Change my non-FreeBSD MAINTAINER mail to bofh@ 
Approved by:	bapt
 2014-12-24 00:14:11 +00:00
Baptiste Daroussin
a2b3272168 Cleanup plist 2014-12-20 17:27:08 +00:00
Gerald Pfeifer
15945f8122 Update the default version of GCC in the Ports Collection from GCC 4.7.4 
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
 2014-09-10 20:50:31 +00:00
Martin Wilke
015670c696 - Update to 4.5.2 
- Pass maintainership to submitter

PR:		190564
 2014-06-04 06:28:56 +00:00
Martin Wilke
03fe751588 - Update to 4.5.1 
PR:		187975
Submitted by:	Ports Fury
 2014-05-21 05:40:53 +00:00
Martin Wilke
5ba557af23 - Stage support 
- Update to version 4.4.3

PR:		187041
Submitted by:	ports fury
 2014-02-27 08:46:42 +00:00
Baptiste Daroussin
a2275161bd In preparation for making libtool generate libraries with a sane name, fix all 
LIB_DEPENDS in biology
 2013-12-11 14:43:51 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Alex Kozlov
d4041784dc - Remove MAKE_JOBS_SAFE variable 
Approved by:	portmgr (bdrewery)
 2013-08-14 22:35:50 +00:00
Martin Wilke
0896ca6624 - Update to 4.4.2 
PR:		180515
Submitted by:	Ports Fury
 2013-07-15 14:49:02 +00:00
Martin Wilke
f811ff18d3 - Update to 4.4.1 
PR:		177257
Submitted by:	Ports Fury
 2013-03-26 01:08:40 +00:00
Max Brazhnikov
81c27c891a Bump PORTREVISION after DESKTOP_ENTRIES update 2013-01-23 15:00:18 +00:00
Max Brazhnikov
5dd37213f5 - Update DESKTOP_ENTRIES: 
* rephrase Comment field or use port ${COMMENT} if appropriate
  * adjust Icon field according to the Desktop Entry Specification
  * update Categories field: remove deprecated category Application;
    set main category, if missing
- Remove indefinite article and/or rephrase COMMENT
- Trim Makefile header
- Other minor changes
 2013-01-07 02:07:26 +00:00
Pawel Pekala
ff942cf270 - Update to version 4.4.0 
- Mark MAKE_JOBS_SAFE
- Make dependency on print/pdflib optional
- Switch to PLIST_FILES

While here:
- Add missing deps
- Add desktop entry

PR:		ports/172498
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
 2012-10-30 20:31:14 +00:00
Thomas Abthorpe
d46aafc64e - Reassign to the heap at maintainer's request 2012-10-01 14:45:16 +00:00
Dirk Meyer
2b74a89bc8 - update png to 1.5.10 2012-06-01 05:26:28 +00:00
Alex Dupre
1b91e235c3 Chase pdflib.so version and bump PORTREVISION accordingly. 2012-01-10 11:41:37 +00:00
Pietro Cerutti
c56e966dc9 - unbreak 
Feature safe:	yes
 2011-11-17 13:22:29 +00:00
Pav Lucistnik
7bd53bb5b7 - Mark BROKEN: does not compile with new fltk 
Reported by:	pointyhat
 2011-11-04 22:19:36 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Dirk Meyer
de78af3ac5 - update to 1.4.1 
Reviewed by:	exp8 run on pointyhat
Supported by:	miwi
 2010-03-28 06:47:48 +00:00
Pietro Cerutti
c6a2501ef2 - Chase x11-toolkits/fltk update 2010-03-23 21:14:39 +00:00
Dirk Meyer
ca9c60461c - update to jpeg-8 2010-02-05 11:46:55 +00:00
Dirk Meyer
eca78ec61b - bump all port that indirectly depends on libjpeg and have not yet been bumped or updated 
Requested by:	edwin
 2009-07-31 13:57:52 +00:00
Martin Wilke
3e4ed01146 - Remove unneeded dependency from gtk12/gtk20 [1] 
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
	Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
	ehaupt, nox, itetcu, flz, pav

PR:		116263
Tested on:	pointyhat
Approved by:	portmgr (pav)
 2008-04-19 17:56:05 +00:00
Martin Wilke
5afc678aac - Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG 
- Bump PORTREVISION

Approved by:	portmgr (xorg cleanup)
 2008-03-23 16:44:09 +00:00
Florent Thoumie
d4f0d0048a - Welcome X.org 7.2 \o/. 
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
 2007-05-19 20:36:56 +00:00
Alex Dupre
8e8d970bfa Chase pdf library and bump PORTREVISION. 2006-10-09 08:18:35 +00:00
Marcus Alves Grando
843d1a4279 - Update to 2006.02.13 
PR:		95281
Submitted by:	maintainer
 2006-04-05 01:58:03 +00:00
Sam Lawrance
fed5ed01f9 Update to 2006.01.25. 
PR:		ports/93051
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2006-02-09 10:33:47 +00:00
Tim Bishop
b9073575f7 - New upstream version; two patches incorporated. 
PR:		90140
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by:	clement (mentor)
 2005-12-10 14:04:33 +00:00
Tim Bishop
ef117d6358 - Update to 2005.13.07 to make fetchable again 
PR:		89976
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by:	clement (mentor)
 2005-12-06 15:13:17 +00:00
Kris Kennaway
8295c21a0e BROKEN: Size mismatch 2005-11-16 04:37:44 +00:00
Sergey Matveychuk
88de31623a - Update to 2004.12.16 
PR:		ports/75205
Submitted by:	maintainer
 2004-12-18 15:14:42 +00:00
Sergey Matveychuk
5e2edc3f15 Not a real update with the last patch. 
The real update here.
 2004-12-11 03:58:19 +00:00
Sergey Matveychuk
fd116809ac - This update brings seaview to the latest release (dated 09.24.04 
in the FTP site).

- While here add a modeline for vi, and fix a tab (cosmetic)

- Make portlint happy.

PR:		ports/74897
Submitted by:	maintainer
 2004-12-11 03:49:29 +00:00
Oliver Eikemeier
2a40961e20 unbreak, only minor changes in the distfiles (see PR) 
Since the distfile has no version number, put it in
DIST_SUBDIR=	${PORTNAME}-${PORTVERSION}

PR:		66817
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
 2004-05-18 14:59:02 +00:00
Kris Kennaway
df19f65e91 BROKEN: Checksum mismatch 2004-04-12 03:37:14 +00:00
Kirill Ponomarev
c8e96952a6 - Update to version 2003.11.25 2004-01-29 10:09:29 +00:00
Kirill Ponomarev
f1b2dca9e3 - Update to new version 2003.11.17 
- Unbreak this port
 2003-11-17 13:36:41 +00:00
Eric Anholt
e4a14e5699 Mark BROKEN: distfile has changed. 2003-11-06 23:15:06 +00:00
Tim Vanderhoek
29763acb4a Upgrade to 2003.01.21. Appears to only add some more file export/print 
options.  Additional patches were necessary since the fltk port seems
to have been upgraded and thus also broken this port (which would
been already broken due to the checksum failure).
 2003-05-22 05:59:32 +00:00
Tim Vanderhoek
826bc61d7e Add back the WWW which was inexplicably deleted in a previous 
revision.  Make a few organisational improvements.  However, be
too lazy to move to pkg-message a note that really shouldn't
be necessary for the end user at all.
 2003-05-22 02:44:05 +00:00
Akinori MUSHA
7cc1393a93 De-pkg-comment. 2003-02-20 17:07:10 +00:00
Ying-Chieh Liao
5f94a921b1 unbroke by upgrade to 20021018 
drop maintainership

PR:		45466
Submitted by:	old maintainer
 2002-11-20 14:03:25 +00:00
Tilman Keskinoz
7599b3caa6 Update WWW 2002-11-07 23:13:11 +00:00
Mike Heffner
c31a69e966 Bump XForms lib. version. 2002-07-04 09:20:30 +00:00