Commit graph

10283 commits

Author SHA1 Message Date
John Marino
6e3d37113d Move math/why3-gpl => math/why3-spark
There are two reasons to rename this port.
1) Upstream never liked it and requested -spark be the suffix instead
2) An ongoing attempt to fix lang/spark may result in a number of slave
   ports with a -spark suffix, so this keeps up consistency as all of
   these ports only exist to support that port.
2015-12-10 20:20:22 +00:00
Jan Beich
d6517636e1 math/glm: update to 0.9.7.1,1
Changes:	https://github.com/g-truc/glm/releases/tag/0.9.7.1
PR:		203181
Approved by:	maintainer timeout (83 days)
2015-12-09 23:43:30 +00:00
Wen Heping
2f7b9f0bff - Update to 0.7.6.1 2015-12-09 08:57:08 +00:00
Mark Felder
0be86fb357 math/py-munkres: Update to 1.0.7 2015-12-08 17:27:27 +00:00
Mathieu Arnold
faaac0db42 Don't use GH_TAGNAME when DISTVERSION* variables can be used.
With hat:	portmgr
Sponsored by:	Absolight
2015-12-08 09:05:15 +00:00
TAKATSU Tomonari
4df483b3b0 - Update to 1.7-12 2015-12-06 10:49:41 +00:00
TAKATSU Tomonari
3873cbcc24 - Update to 0.5-88
- Update WWW in pkg-descr
2015-12-06 10:01:49 +00:00
TAKATSU Tomonari
0a3561889b - Update to 1.0.1
- Update COMMENT and pkg-descr
2015-12-06 06:54:57 +00:00
TAKATSU Tomonari
c295b101eb - Update to 2.0.0 2015-12-06 05:45:29 +00:00
TAKATSU Tomonari
02043c4259 - Update to 0.6.300.2.0 2015-12-06 05:17:09 +00:00
TAKATSU Tomonari
985556cb3b - Add new port: math/R-cran-MSwM
Univariate Autoregressive Markov Switching Models for Linear and
  Generalized Models

  WWW: https://cran.r-project.org/web/packages/MSwM/
2015-12-06 04:38:23 +00:00
John Marino
f01cba6e50 FPC ecosystem: Upgrade version 2.6.4 => 3.0.0
This is the first major release of FreePascal in nearly four years.
There are a ton of new features, way more to list here. see:
http://wiki.freepascal.org/FPC_New_Features_3.0

Several new unit ports were added, some were contracted.  Most of
those were absorbed into the main FPC packages, but two units are
no longer supported: sndfile and matroshka.

All 99 remaining ports (including Lazarus ports) were build tested
on FreeBSD i386 and amd64 Release 10.2
2015-12-05 23:29:36 +00:00
Sunpoet Po-Chuan Hsieh
1391838580 - Update to 1.46
Changes:	http://search.cpan.org/dist/Math-BigInt-GMP/CHANGES
2015-12-04 12:34:17 +00:00
Sunpoet Po-Chuan Hsieh
860249838e - Update to 0.38
Changes:	http://search.cpan.org/dist/Math-BigInt-FastCalc/CHANGES
2015-12-04 12:34:13 +00:00
Danilo Egea Gondolfo
208ce6f700 - Update to 6.300.2 2015-12-04 11:03:54 +00:00
Raphael Kubo da Costa
54f0a044c9 Update to 1.1.1.
This is a bug fix release that adds OCaml4 support, which allows us to drop
files/patch-ocaml4.
2015-12-04 09:51:00 +00:00
Antoine Brodin
32e4a363c1 Mark BROKEN
With hat:	portmgr
2015-12-04 06:22:32 +00:00
Johan van Selst
e0da27c0d4 Update to GAP 4.7.9 2015-12-03 20:51:02 +00:00
Kurt Jaeger
7d6ce6223e math/gnuplot: 4.6.6 -> 5.0.1
- Changes:
  http://www.gnuplot.info/ReleaseNotes_5_0_1.html
- The "gnuplot mode" elisp and TeX files for use with emacs are now
  maintained as a separate project

PR:		204886
Submitted by:	pi
Approved by:	glewis (maintainer), via mail
2015-12-01 20:18:31 +00:00
Wen Heping
048f9d7cdc Functions for Maximum Likelihood (ML) estimation and non-linear
optimization, and related tools. It includes a unified way to
call different optimizers, and classes and methods to handle the
results from the ML viewpoint. It also includes a number of
convenience tools for testing and developing your own models.

WWW: http://www.maxlik.org/
2015-12-01 14:04:33 +00:00
Wen Heping
82e437d223 R-cran-miscTools is miscellaneous tools and utilities for R.
WWW: http://www.micecon.org/
2015-12-01 06:20:15 +00:00
Stephen Montgomery-Smith
039b2da372 - Update to 1.2.9. 2015-11-30 15:35:32 +00:00
Alex Dupre
cbe81e6b46 Update to 3.1.3 release. 2015-11-30 11:32:34 +00:00
TAKATSU Tomonari
1ec6437ea4 - Update to 6.2
- Update WWW in pkg-descr
2015-11-29 13:58:45 +00:00
TAKATSU Tomonari
3530da76ff - Update to 1.1.2
- Update WWW in pkg-descr
2015-11-29 12:49:05 +00:00
Antoine Brodin
a1af583929 Deprecate ports broken for more than 6 months 2015-11-29 09:51:30 +00:00
Sunpoet Po-Chuan Hsieh
8c31d1ab35 - Add LICENSE_FILE
- Add NO_ARCH
2015-11-29 07:00:19 +00:00
Dmitry Marakasov
259078c693 - Mark BROKEN: fails to fetch:
fetch: http://public.research.att.com/~stat/xgobi/xgobi.sh.gz: No route to host
2015-11-29 03:13:33 +00:00
Stephen Montgomery-Smith
22ef6500e5 - Update to 2.2.3. 2015-11-28 19:17:39 +00:00
Adam Weinberger
1edfd77c86 Update to 1.17. Strip the XS library, and sort plist.
Changes: https://metacpan.org/changes/distribution/Math-Random-MT
2015-11-28 17:14:52 +00:00
David Naylor
ebba12ec9c math/R-cran-car: update to 2.1-0
Changes:
 - Remove port's broken and depreciated status
 - Add two dependencies
 - Add GPLv3 as dual license
 - Update website URL

Change Log:
 - New power family called skewPower has been added that can be used with the
   Box Cox method with a few negative responses (joint work with Doug Hawkins).
   Several functions modified to accomodate two-parameter power families.
 - Fixed bug in Anova() for coxph models with clusters (reported by Jesus
   Humberto Gomez ), due apparently to a change in coxph().
 - Anova() F-tests for binomial and Poisson GLMs now changes
   error.estimate="dispersion" to "pearson" as advertized (bug reported by
   Will Petry).
 - Improved behavior of above-plot legends in scatterplot().
 - Fixed sp() (bug reported by Cesar Rabak).
 - Conforms to new CRAN requirements for package imports.

Reported by:	tota@
PR:		203418
PR:		204587
2015-11-28 14:30:40 +00:00
Stephen Montgomery-Smith
94c4be06a3 - Mild cosmetic changes to the Makefile comments. 2015-11-28 05:34:30 +00:00
Stephen Montgomery-Smith
e95300b703 - Add name mangling so that it will build when science/netcdf is installed.
- Bump portrevision.
2015-11-28 05:30:18 +00:00
Ashish SHUKLA
1f2d3fe605 - Patch euktoeps, so it uses GNU getopt
- Add dependency on misc/getopt

Reported by:	Nicolas <nh.techn at gmail.com>
2015-11-28 04:24:16 +00:00
Stephen Montgomery-Smith
da906cd857 - Update to 6.2.0. 2015-11-28 01:59:35 +00:00
Dmitry Marakasov
12805ae760 - Clarify LICENSE
- Add LICENSE_FILE
- Add NO_ARCH
- Switch to options helpers
2015-11-27 11:26:12 +00:00
Danilo Egea Gondolfo
e5d83bb3d8 - Update to 6.200.5 2015-11-26 14:43:42 +00:00
Martin Wilke
db53585487 - Take Maintainership
Approved by:	mat (mentor)
2015-11-26 14:39:58 +00:00
Martin Wilke
b233276d78 - Take Maintainership
Approved by:	mat (mentor)
2015-11-26 12:04:00 +00:00
Sunpoet Po-Chuan Hsieh
9b5082f0cf - Update to 3.28
Changes:	http://search.cpan.org/dist/Math-MPFR/CHANGES
2015-11-26 01:00:37 +00:00
Sunpoet Po-Chuan Hsieh
909caa89f4 - Update to 1.07
Changes:	http://search.cpan.org/dist/Math-Utils/Changes
2015-11-26 01:00:13 +00:00
Raphael Kubo da Costa
6dd1205977 Update to 3.2.7.
PR:		203814
Submitted by:	dieterich.joh@gmail.com,
		Tobias Berner <tcberner@gmail.com>
2015-11-25 13:25:55 +00:00
Thierry Thomas
b737e7ac1a Update to 0.6.3.
PR:		ports/204738
Submitted by:	Rainer Hurling
2015-11-24 21:34:05 +00:00
Wen Heping
077c7556bb An implementation of about 6 major classes of statistical regression
models.At the heart of it are the vector generalized linear and
additive model (VGLM/VGAM) classes, and the book "Vector Generalized
Linear and Additive Models: With an Implementation in R" (Yee, 2015)
gives details of the statistical framework and VGAM package. Currently
only fixed-effects models are implemented, i.e., no random-effects models.

WWW: https://www.stat.auckland.ac.nz/~yee/VGAM
2015-11-24 06:22:04 +00:00
Sunpoet Po-Chuan Hsieh
9f2eca4db7 - Update to 1.23
Changes:	http://search.cpan.org/dist/Math-BigInt-Pari/CHANGES
2015-11-23 18:24:32 +00:00
Steven Kreuzer
42376af1a9 Update to 1.0.0
PR:		204274
Submitted by:	John W. O'Brien <john@saltant.com>
2015-11-23 15:32:38 +00:00
Stephen Montgomery-Smith
a38e17ce02 - Give maintainership to stephen@, This will help him track subtle C++
errors.  These errors also break cad/netgen.
2015-11-22 16:55:34 +00:00
Palle Girgensohn
da6a8a3291 Use USES=pgsql instead of hardwiring a postgresql version
PR:		204719
Submitted by:	Rainer Hurling<rhurlin@gwdg.de> (maintainer)
2015-11-22 11:33:58 +00:00
Alexey Dokuchaev
08414216f2 - Update to version 2.5
- Define LICENSE (GPLv2), switch to USES=localbase
- Drop redundant DISTNAME and CONFIGURE_ARGS assignments
- Remove old-school attribution from pkg-descr

PR:		203959 (modified)
Approved by:	maintainer timeout (33 days)
2015-11-22 08:03:51 +00:00
Antoine Brodin
a91eabe49f Unbreak INDEX with fmake:
"Makefile", line 54: Unassociated shell command "# ${LR_MOD_DIR}/car/INDEX:${PORTSDIR}/math/R-cran-car"
fmake: fatal errors encountered -- cannot continue
2015-11-22 07:45:11 +00:00