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11 commits

Author SHA1 Message Date
Martin Wilke
059bf913b9 - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
Emanuel Haupt
094043c26a Remove trailing whitespaces from category biology 2014-02-21 13:35:26 +00:00
Emanuel Haupt
5005b67362 According to the Porter's Handbook (5.12.2.3.) default options must be added to 
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.

This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.

Approved by:    portmgr (bapt)
 2014-02-10 13:54:26 +00:00
Adam Weinberger
955d37365b Convert biology to MDOCS and MEXAMPLES 2014-01-03 15:46:52 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Sylvio Cesar Teixeira
aad73e57ae - Update to 3.23 2012-01-17 00:51:39 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Sylvio Cesar Teixeira
f1cd5913ef - Update to 3.22 
Approved by: 	itetcu (mentor)
 2010-03-21 17:18:20 +00:00
Sylvio Cesar Teixeira
ba072d1713 - Update my mail address to FreeBSD 
Approved by:	miwi (mentor)
 2009-11-27 22:52:30 +00:00
Marcelo Araujo
7c7ff787ef - Update to 3.21. 
- Reset maintainer to submitter.

PR:		ports/138192
Submitted by:	Sylvio Cesar <scjamorim@bsd.com.br>
 2009-08-28 14:52:05 +00:00
Martin Wilke
9326ebd9c8 MUMmer is a modular system for the rapid whole genome alignment of finished 
or draft sequence. This package provides an efficient suffix tree library,
seed-and-extend alignment, SNP detection, repeat detection, and
visualization tools.

WWW:	http://mummer.sourceforge.net/

PR:		ports/118142
Submitted by:	Tony Maher
 2007-12-14 20:54:47 +00:00