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5201 commits

Author SHA1 Message Date
Yuri Victorovich
17c3d59d37 science/py-chempy: Update 0.7.11 -> 0.7.12
Reported by:	portscout
2020-07-06 17:14:00 +00:00
Tobias Kortkamp
8f326d1f65 science/py-scipy: Unbreak build with GCC 10
scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/cnaitr.f:666:35:

  383 |             call svout (logfil, 1, rnorm, ndigit,
      |                                   2
......
  666 |             call svout (logfil, 2, rtemp, ndigit,
      |                                   1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/cnaitr.f:737:39:

  383 |             call svout (logfil, 1, rnorm, ndigit,
      |                                   2
......
  737 |                 call svout (logfil, 2, rtemp, ndigit,
      |                                       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
gfortran10:f77: scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/dsesrt.f
scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/dsaitr.f:671:35:

  369 |             call dvout (logfil, 1, rnorm, ndigit,
      |                                   2
......
  671 |             call dvout (logfil, 2, xtemp, ndigit,
      |                                   1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
scipy/sparse/linalg/eigen/arpack/ARPACK/SRC/dsaitr.f:743:39:

  369 |             call dvout (logfil, 1, rnorm, ndigit,
      |                                   2
......
  743 |                 call dvout (logfil, 2, xtemp, ndigit,
      |                                       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/py27-scipy-1.2.2_1.log
http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/py37-scipy-1.2.2_1.log

A better fix would be to update this port to >= 1.5.1 which should
support GCC 10 out of the box and would allow -std=legacy to be
removed again.

PR:		246700
2020-07-05 11:02:17 +00:00
Stephen Montgomery-Smith
9e47f56284 - Update devel/gdcm to 3.0.7.
- Bump portrevision of dependent ports.
2020-07-04 20:53:55 +00:00
Niclas Zeising
0e32330f15 Chanse update of devel/libffi
Chase the devel/libffi update
Bump portrevision of all dependent ports to chace shard library version bump
in libffi.
Update LIB_DEPENDS lines where needed to not require a specific version of
libffi.so.

PR:		247028 (for tracking)
2020-07-04 18:11:42 +00:00
Tobias Kortkamp
8a4745698d science/xtb: Unbreak build with GCC 10
/wrkdirs/usr/ports/science/xtb/work/xtb-6.3.0/src/prog/main.F90:626:39:

  626 |          call relaxed_scan(env,mol,wfn,calc)
      |                                       1
Error: Explicit interface required for polymorphic argument at (1)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/xtb-6.3.0.log

PR:		246700
2020-07-04 12:19:38 +00:00
Tobias Kortkamp
9fe233ccae science/cgnslib: Unbreak build with GCC 10
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:152:64:

  152 |       call cg_goto_f( cgfile, cgtree, ierr, "Family2", 0, 'end')
      |                                                                1
Error: Missing actual argument for argument '_formal_14' at (1)
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:168:43:

  168 |      &               "Family2.1", 0, 'end')
      |                                           1
Error: Missing actual argument for argument '_formal_16' at (1)
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:190:49:

  190 |       call cg_goto_f(cgfile, cgtree, ierr, 'end')
      |                                                 1
Error: Missing actual argument for argument '_formal_12' at (1)
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:196:60:

  196 |       call cg_goto_f(cgfile, cgbase, ierr, "Zone", 0, 'end')
      |                                                            1
Error: Missing actual argument for argument '_formal_14' at (1)
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:231:76:

  231 |       call cg_goto_f(cgfile, cgbase, ierr, "Zone", 0, "SubRegion", 0, 'end')
      |                                                                            1
Error: Missing actual argument for argument '_formal_16' at (1)
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:241:60:

  241 |       call cg_goto_f(cgfile, cgbase, ierr, "Zone", 0, 'end')
      |                                                            1
Error: Missing actual argument for argument '_formal_14' at (1)
/wrkdirs/usr/ports/science/cgnslib/work/CGNS-4.1.1/src/tests/test_family_treef.F90:246:75:

  246 |       call cg_goto_f(cgfile, cgbase, ierr, "Zone", 0, "UserData", 0, 'end')
      |                                                                           1
Error: Missing actual argument for argument '_formal_16' at (1)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/cgnslib-4.1.1,1.log

PR:		246700
2020-07-04 11:22:08 +00:00
Tobias Kortkamp
f5e1422d15 science/libccp4: Unbreak build with GCC 10
fortran/pack_f.f:109:28:

   45 |       call pack_wordimage_f(data, x, y, filnarray)
      |                            2
......
  109 |       call pack_wordimage_f(data, x, y, filnarray)
      |                            1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/INTEGER(2)).
fortran/pack_f.f:141:30:

   77 |       call v2pack_wordimage_f(data, x, y, filnarray)
      |                              2
......
  141 |       call v2pack_wordimage_f(data, x, y, filnarray)
      |                              1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/INTEGER(2)).

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/libccp4-6.5.1_4.log

PR:		246700
2020-07-04 11:10:29 +00:00
Tobias Kortkamp
9c477217f7 science/aircraft-datcom: Unbreak build with GCC 10
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:185:40:

  168 |      1            TINF,RN,SRF,CBAR,BLRF,XCG,ZCG,DUM,
      |                                   2
......
  185 |      1  TRA(78),TRA(76),TRA(79),TRA(80),O,P,Q,R,S,T,NN,NM)
      |                                        1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:187:39:

  168 |      1            TINF,RN,SRF,CBAR,BLRF,XCG,ZCG,DUM,
      |                                   2
......
  187 |      1  SBD(124),SBD(123),SBD(115),ANA,O,P,Q,R,S,T,NN,NM)
      |                                       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:302:34:

  168 |      1            TINF,RN,SRF,CBAR,BLRF,XCG,ZCG,DUM,
      |                          2
......
  302 |      2 FACT(143),FACT(22),WBT(46),H,H,O,P,Q,R,S,T,NN,NM)
      |                                  1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:304:57:

  167 |       CALL SWRITE(11,FOR,46,ICONT,1,FLC(I+2),ALT,VINF,PINF,
      |                                                 2
......
  304 |      1 CALL SWRITE(6,FOR2,26,JCON,NALPHA,FLC(23),FACT(2),ANONE,
      |                                                         1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:311:33:

  168 |      1            TINF,RN,SRF,CBAR,BLRF,XCG,ZCG,DUM,
      |                          2
......
  311 |      2 STP(133),SWB(40),STP(111),H,H,O,P,Q,R,S,T,NN,NM)
      |                                 1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:313:57:

  167 |       CALL SWRITE(11,FOR,46,ICONT,1,FLC(I+2),ALT,VINF,PINF,
      |                                                 2
......
  313 |      1 CALL SWRITE(6,FOR2,26,JCON,NALPHA,FLC(23),SWB(12),ANONE,
      |                                                         1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:336:7:

  167 |       CALL SWRITE(11,FOR,46,ICONT,1,FLC(I+2),ALT,VINF,PINF,
      |                                                      2
......
  336 |      1 H,O,P,Q,R,S,T,Q,R,S,T,NN,NM)
      |       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:338:7:

  167 |       CALL SWRITE(11,FOR,46,ICONT,1,FLC(I+2),ALT,VINF,PINF,
      |                                                      2
......
  338 |      1 H,O,P,Q,R,S,T,Q,R,S,T,NN,NM)
      |       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)
/wrkdirs/usr/ports/science/aircraft-datcom/work/aircraft-datcom-ed877bb/src/auxout.f:348:7:

  167 |       CALL SWRITE(11,FOR,46,ICONT,1,FLC(I+2),ALT,VINF,PINF,
      |                                                      2
......
  348 |      1 H,O,P,Q,R,S,T,Q,R,S,T,NN,NM)
      |       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/aircraft-datcom-0.0.20120723_5.log

PR:		246700
2020-07-04 11:07:57 +00:00
Tobias Kortkamp
cd7742426e science/cdf: Unbreak build with GCC 10
qst2if.f:129:17:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  129 |      .           NULL_, STATUS)
      |                 1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:133:17:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  133 |      .           NULL_, STATUS)
      |                 1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:152:23:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  152 |      .                 VAR_NUM_ELEMENTS,
      |                       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:164:20:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  164 |      .              NULL_, STATUS)
      |                    1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:172:20:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  172 |      .              NULL_, STATUS)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:180:20:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  180 |      .              NULL_, STATUS)
      |                    1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:187:17:

  187 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                 1
Error: More actual than formal arguments in procedure call at (1)
qst2if.f:199:50:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  199 |         STATUS = CDF_LIB    (PUT_, CDF_CHECKSUM_, CHECKSUM,
      |                                                  1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:207:51:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  207 |         STATUS = CDF_LIB    (GET_, rVARs_NUMDIMS_, NUM_DIMS_OUT,
      |                                                   1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:238:23:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  238 |      .                 VAR_NUM_ELEMENTS,
      |                       1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:250:64:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  250 |         STATUS = CDF_LIB    (CREATE_, rVAR_, 'VAR2a', CDF_INT4, 1,
      |                                                                1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:265:45:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  265 |         STATUS = CDF_LIB    (SELECT_, rVAR_, varNums(1),
      |                                             1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:288:44:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  288 |         STATUS = CDF_LIB   (SELECT_, rVAR_, VAR_NUM_OUT,
      |                                            1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:292:55:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  292 |         STATUS = CDF_LIB   (SELECT_, rVARs_RECNUMBER_, REC_NUM,
      |                                                       1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:300:60:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  300 |             STATUS = CDF_LIB   (SELECT_, rVARs_DIMINDICES_, INDICES,
      |                                                            1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:311:55:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  311 |         STATUS = CDF_LIB   (SELECT_, rVARs_RECNUMBER_, REC_NUM,
      |                                                       1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:319:60:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  319 |             STATUS = CDF_LIB   (SELECT_, rVARs_DIMINDICES_, INDICES,
      |                                                            1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:345:56:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  345 |         STATUS = CDF_LIB    (SELECT_, rVARs_RECNUMBER_, REC_START,
      |                                                        1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:377:57:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  377 |         STATUS = CDF_LIB    (CONFIRM_, rVARs_RECNUMBER_, recnum_out,
      |                                                         1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:419:51:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  419 |         STATUS = CDF_LIB   (SELECT_, rVAR_SEQPOS_, REC_NUM, INDICES,
      |                                                   1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:426:24:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  426 |      .           NULL_, STATUS)
      |                        1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:431:52:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  431 |         STATUS = CDF_LIB   (CONFIRM_, rVAR_SEQPOS_, REC_NUM, INDICES,
      |                                                    1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:447:51:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  447 |         STATUS = CDF_LIB   (SELECT_, rVAR_SEQPOS_, REC_NUM, INDICES,
      |                                                   1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:454:24:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  454 |      .           NULL_, STATUS)
      |                        1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:465:56:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  465 |         STATUS = CDF_LIB    (SELECT_, rVARs_RECNUMBER_, 10,
      |                                                        1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:472:50:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  472 |         STATUS = CDF_LIB   (GET_, rVARs_RECDATA_, numVars,
      |                                                  1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:490:22:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  490 |      .                ATTR_NUM_OUT,
      |                      1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:498:47:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  498 |         STATUS = CDF_LIB    (SELECT_, gENTRY_, ENTRY_NUM,
      |                                               1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:509:48:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  509 |         STATUS = CDF_LIB   (GET_, gENTRY_DATA_, ENTRY_VALUE_OUT,
      |                                                1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:521:49:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  521 |         STATUS = CDF_LIB    (GET_, LIB_VERSION_, VERSIONlib,
      |                                                 1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:529:49:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  529 |         STATUS = CDF_LIB    (GET_, CDF_VERSION_, VERSIONcdf,
      |                                                 1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:547:50:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  547 |         STATUS = CDF_LIB    (GET_, CDF_CHECKSUM_, CHECKSUM_out,
      |                                                  1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:558:51:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  558 |         STATUS = CDF_LIB    (GET_, rVARs_NUMDIMS_, NUM_DIMS_OUT,
      |                                                   1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:596:26:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  596 |      .              PUT_, rVAR_NAME_, NEW_VARNAME,
      |                          1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:605:36:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  605 |      .              rVAR_DATATYPE_, VAR_DATA_TYPE_OUT,
      |                                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:619:49:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  619 |         STATUS = CDF_LIB   (GET_, rVAR_RECVARY_, VAR_REC_VARIANCE_OUT,
      |                                                 1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:660:26:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  660 |      .              PUT_, ATTR_NAME_, NEW_ATTRNAME,
      |                          1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:669:32:

  122 |      .                DIM_SIZES, ID,
      |                      2
......
  669 |      .             ATTR_SCOPE_, ATTRSCOPE_OUT,
      |                                1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
qst2if.f:684:52:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  684 |         STATUS = CDF_LIB   (GET_, gENTRY_DATATYPE_, ENTRY_DATA_TYPE_OUT,
      |                                                    1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:699:50:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  699 |         STATUS = CDF_LIB   (SELECT_, CDF_STATUS_, CDF_OK,
      |                                                  1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:709:13:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  709 |      .       NEGtoPOSfp0on,
      |             1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:716:13:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  716 |      .       NEGtoPOSmode,
      |             1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:736:50:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  736 |         STATUS = CDF_LIB   (GET_, DATATYPE_SIZE_, CDF_EPOCH,
      |                                                  1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:748:20:

  121 |         STATUS = CDF_LIB    (CREATE_, CDF_, CDFNAME, NUM_DIMS,
      |                                            2
......
  748 |      .              NULL_, STATUS)
      |                    1
Error: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(4)/CHARACTER(*)).
qst2if.f:755:17:

  755 |         STATUS = CDF_LIB   (GET_, CDF_INFO_, CDFNAME, cTypeOUT,
      |                 1
Error: Missing actual argument for argument '_formal_9' at (1)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/cdf3-3.3.0_13.log

PR:		246700
2020-07-04 10:40:42 +00:00
Tobias Kortkamp
4d6ac4eecb science/isaac-cfd: Unbreak build with GCC 10
march.F:1111:47:

 1111 |      1                     Q, PROPS, NPPTS, S, VOL, DTJ,
      |                                               1
Error: Rank mismatch in argument 'vol' at (1) (scalar and rank-3)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/isaac-4.2_16.log

PR:		246700
2020-07-04 08:00:41 +00:00
Tobias Kortkamp
1c851ae5da science/dcl: Unbreak build with GCC 10
glrqnp.f:29:56:

   29 |       DATA CPARAS(6) / 'REALMIN ' /, RX(6) / Z'00800000' /
      |                                                        1
Error: BOZ literal constant near (1) cannot be assigned to a REAL variable [see '-fno-allow-invalid-boz']
glrqnp.f:28:56:

   28 |       DATA CPARAS(5) / 'REALMAX ' /, RX(5) / Z'7F7FFFFF' /
      |                                                        1
Error: BOZ literal constant near (1) cannot be assigned to a REAL variable [see '-fno-allow-invalid-boz']

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/dcl-5.4.8_9.log

PR:		246700
2020-07-04 06:54:39 +00:00
Johannes M Dieterich
9dc08a1d2f science/xtb: upgrade to 6.3.2
Maintenance and bugfix release.

Release notes: https://github.com/grimme-lab/xtb/releases/tag/v6.3.2
2020-07-04 00:13:47 +00:00
Fernando Apesteguía
823d5a544c science/afni: update to 20.1.18
While here:

 * Reorder some variables
 * Remove duplicate USE_GL

Reported by:	portscout
2020-07-02 06:55:49 +00:00
Tobias C. Berner
e2cd5999be Bump devel/jsoncpp consumers after r540853.
Reported by:	Kevin Oberman <rkoberman@gmail.com>
2020-06-30 17:46:18 +00:00
Yuri Victorovich
dce5cf02f6 science/elk: Update 5.2.14 -> 6.8.4
Reported by:	portscout
2020-06-30 15:12:48 +00:00
Yuri Victorovich
08d6161d07 science/lammps: Update 15Jun2020 -> 30Jun2020
Reported by:	GitHub notification
2020-06-29 19:55:53 +00:00
Yuri Victorovich
4898d4bf3a science/coordgenlibs: Update 1.4.0-6 -> 1.4.1
Reported by:	portscout
2020-06-29 00:46:52 +00:00
Max Brazhnikov
b6cbc57d11 science/py-openpiv: update to 0.22.0 2020-06-28 11:40:46 +00:00
Yuri Victorovich
ff7490d3b1 science/py-molmod: Update 1.4.7 -> 1.4.8
Reported by:	portscout
2020-06-26 01:57:29 +00:00
Tobias Kortkamp
0b4fbde59f science/berkeleygw: Unbreak build with GCC 10
epsilon_main.f90:1271:72:

 1271 |         call epsinv(gvec,pol,ekin,qq,is_q0,crys,scal,kp,omega_plasma,iq)
      |                                                                        1
Error: Missing actual argument for argument '_formal_18' at (1)

http://package18.nyi.freebsd.org/data/121amd64-default-PR244494/2020-06-10_18h04m44s/logs/errors/BerkeleyGW-2.0.0_5.log

PR:		246700
2020-06-25 06:50:17 +00:00
Yuri Victorovich
519c61074d science/votca: Update 1.6 -> 1.6.1
Reported by:	portscout
2020-06-24 02:07:28 +00:00
Loïc Bartoletti
1cc821b854 science/elmerfem: Prepare for Qt5.15
PR:             247010
Approved by:    tcberner (mentor, implicit)
Differential Revision:  https://reviews.freebsd.org/D25412
2020-06-23 15:49:30 +00:00
Gleb Popov
2c8ff8a2cf science/dlib-cpp and science/py-dlib: Update to 19.20
Reported by:	portscout!
2020-06-23 14:41:29 +00:00
Kurt Jaeger
2761a50814 science/afni: update 20.1.16 -> 20.1.17
Reported by:	portscout
2020-06-21 14:43:48 +00:00
Max Brazhnikov
b15b029ca5 science/py-openpiv:
- Update to 0.21.8b
- Adjust dependencies, make some of them optional
- Limit port to upstream supported versions of Python: 3.7 and greater
2020-06-20 16:13:45 +00:00
Fernando Apesteguía
a81458aab9 science/afni: update to 20.1.16
Reported by:	portscout
2020-06-19 06:55:14 +00:00
Sunpoet Po-Chuan Hsieh
cb333cf1ec Move devel/swig30 to devel/swig and update to 4.0.1
- Do not silence installation message
- Update dependent ports:
  - Fix build with swig 4.0.1
  - Update *_DEPENDS
  - Remove BINARY_ALIAS

Changes:	http://www.swig.org/news.php
PR:		246613
Exp-run by:	antoine
2020-06-17 18:17:45 +00:00
Dmitry Marakasov
92871ce39e - Update WWW
Approved by:	portmgr blanket
2020-06-17 09:35:01 +00:00
Yuri Victorovich
a313d407ec science/votca: Revert unintended changes 2020-06-17 01:57:29 +00:00
Yuri Victorovich
5872190348 science/votca: Broken on i386
Reported by:	fallout
2020-06-17 01:54:25 +00:00
Yuri Victorovich
657e019612 science/py-phonopy: Update 2.4.2 -> 2.5.0
Reported by:	portscout
2020-06-16 16:11:36 +00:00
Fernando Apesteguía
f4083dd12a science/afni: update to 20.1.15
Reported by:	portscout
2020-06-16 06:31:27 +00:00
Yuri Victorovich
741be9dea7 science/py-phonopy: Update 2.3.0 -> 2.4.2 2020-06-16 02:03:10 +00:00
Yuri Victorovich
2df5121221 science/lammps: Update 2Jun2020 -> 15Jun2020
Reported by:	GitHub notification
2020-06-15 23:33:13 +00:00
Johannes M Dieterich
4d80ac3f0d science/xtb: update to release 6.3.1
various correctness bugfixes, especially for GFN-FF
2020-06-15 23:23:15 +00:00
Yuri Victorovich
af89163268 science/jdftx: Update 1.5.0 -> 1.6.0
Reported by:	portscout
2020-06-15 20:29:51 +00:00
Yuri Victorovich
5c43c52215 devel/docopt.cpp: Update 0.6.2-6 -> 0.6.3
Reported by:	portscout
2020-06-15 16:03:56 +00:00
Thierry Thomas
7a64ce1b71 Upgrade to v6.1.1 and add Scotch´s support. 2020-06-15 16:02:40 +00:00
Yuri Victorovich
b2238ef2a3 science/agrum: Update 0.17.3 -> 0.18.0 2020-06-15 08:26:22 +00:00
Yuri Victorovich
e2435fdf69 science/hepmc3: Update science/hepmc3: Update 3.2.1 -> 3.2.2
Reported by:	portscout
2020-06-15 04:02:53 +00:00
Yuri Victorovich
2fa0cd5e9d Update science/qbox: 1.71.2 -> 1.71.3
Reported by:	portscout
2020-06-15 02:53:07 +00:00
Sunpoet Po-Chuan Hsieh
70c3cafabf Update to 2.30
- Update MASTER_SITES
- Add my LOCAL to MASTER_SITES
- Remove DOCS and OPTIMIZED_CFLAGS options
- Update pkg-descr
- Update WWW
- Take maintainership

Changes:	https://github.com/cjlin1/liblinear/commits/master
2020-06-14 14:22:35 +00:00
TAKATSU Tomonari
567b480b51 - Update to 2.2-10 2020-06-14 12:16:54 +00:00
Thierry Thomas
d7625a0297 Chase ScaLAPACK´s upgrade and resolve conflict between cblas and openblas.
Approved by:	yuri (maintainer)
2020-06-14 09:14:03 +00:00
Antoine Brodin
ae73d29444 Unbreak bulk -a 2020-06-13 15:05:44 +00:00
Tobias C. Berner
b7a0bda704 Update KDE's Application (release-service) to 20.04.2 2020-06-13 08:14:07 +00:00
Fernando Apesteguía
8490de4e4e science/afni: Update to 20.1.14
Reported by:	portscout
2020-06-12 09:25:01 +00:00
Mark Linimon
15f2a93a40 Add compiler:c++11-lang to USES to fix build on GCC-based systems:
Unsupported compiler -- pybind11 requires C++11 support!

Submitted by:	portmgr (tier-2 blanket)
2020-06-11 11:46:10 +00:00
Stephen Montgomery-Smith
7d875ed6da - Update devel/gdcm to 3.0.6.
- Bump portrevision of dependent ports.
2020-06-10 19:20:31 +00:00
Yuri Victorovich
3c860dcbb4 science/pagmo2: Update 2.11.4 -> 2.15.0-90
Reported by:	portscout
2020-06-10 16:05:16 +00:00