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Author SHA1 Message Date
Muhammad Moinur Rahman
e5963086dc science/gramps: Mark DEPRECATED 
- Requires py-bsddb3 which depends on upstream EOLd db5 which is set to
  expire on 2022-06-30 in the tree.
- If you want this port to stay chase upstream to use py-berkeleydb from
  https://www.jcea.es/programacion/pybsddb.htm which is already in the
  tree.

PR:		262136
 2022-02-28 17:40:41 -06:00
Po-Chuan Hsieh
16e1229edf
science/netcdf-fortran: Clean up after 4.5.3 update 2022-03-01 01:34:44 +08:00
Po-Chuan Hsieh
d1d14ca3e5
astro/cfitsio: Update to 4.0.0 
- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://heasarc.gsfc.nasa.gov/FTP/software/fitsio/c/docs/changes.txt
 2022-02-28 23:06:56 +08:00
Po-Chuan Hsieh
402d2c7f2c
science/healpix: Fix build with cfitsio 4.0.0+ 
Obtained from:	https://sourceforge.net/p/healpix/code/1189/tree//branches/branch_v380r1183/src/cxx/cxxsupport/fitshandle.cc?diff=50dae5f434309d7d74da16d0:1188
 2022-02-28 23:06:56 +08:00
Po-Chuan Hsieh
f7e42ce5d5
devel/protobuf: Update to 3.19.4 
- Bump PORTREVISION of dependent ports for shlib change

Changes:	https://github.com/protocolbuffers/protobuf/releases
 2022-02-28 20:46:46 +08:00
Po-Chuan Hsieh
6f50807f66
science/py-pyteomics: Update to 4.5.2 
Changes:	https://github.com/levitsky/pyteomics/releases
		https://pyteomics.readthedocs.io/en/latest/changelog.html
 2022-02-28 20:46:24 +08:00
Po-Chuan Hsieh
264fb7140c
science/py-pygeodesy: Update to 22.1.22 
Changes:	https://github.com/mrJean1/PyGeodesy/commits/master
 2022-02-28 20:46:23 +08:00
Yuri Victorovich
8257ea6408 science/py-phonopy: Update 2.12.0 -> 2.13.1 
Reported by:	portscout
 2022-02-27 20:08:09 -08:00
Yuri Victorovich
05e4b0f238 science/py-moltemplate: Update 2.20.2 -> 2.20.3 
Reported by:	portscout
 2022-02-27 20:08:09 -08:00
Yuri Victorovich
6fb2a2e9fe science/py-qcengine: Update 0.21.0 -> 0.22.0 
Reported by:	portscout
 2022-02-27 20:08:08 -08:00
Yuri Victorovich
06212b20e7 science/qmcpack: Correct python dependency; Fix tests. 2022-02-27 15:09:21 -08:00
Yuri Victorovich
e91b1159bd science/qmcpack: Update 3.12.0-244 -> 3.13.0 
Reported by:	portscout
 2022-02-27 10:35:42 -08:00
Yuri Victorovich
1f66e54541 science/mctc-lib: Update 0.2.4 -> 0.2.5 
Reported by:	portscout
 2022-02-27 10:35:39 -08:00
Yuri Victorovich
0771f43d88 science/py-PyFR: Update 1.12.3 -> 1.13.0 
Reported by:	portscout
 2022-02-26 00:14:10 -08:00
Yuri Victorovich
f975223255 science/jmol: Update 14.32.24 -> 14.32.25 
Reported by:	portscout
 2022-02-25 10:30:50 -08:00
Yuri Victorovich
fd4453f461 science/nwchem: Update 7.0.2.20211110 -> 7.0.2.20220224 2022-02-25 10:19:33 -08:00
Jason E. Hale
4272ea162d math/libqalculate: Update to 4.0.0 
math/qalculate: Update to 4.0.0

Bump PORTREVISION on math/libqalculate consumers due to shlib bump
 2022-02-24 21:03:11 -05:00
Yuri Victorovich
a0d76a1991 math/ipopt: Update 3.12.13 -> 3.14.4 2022-02-24 08:21:08 -08:00
Yuri Victorovich
265b2b6c62 science/plumed: Update 2.8b -> 2.8.0 
Reported by:	portscout
 2022-02-23 09:02:06 -08:00
Yuri Victorovich
4752351caf science/jmol: Update 14.32.21 -> 14.32.24 
Reported by:	portscout
 2022-02-22 23:22:55 -08:00
Yuri Victorovich
e05723bda2 science/shelxle: Update 1.0.1360 -> 1.0.1365 
Reported by:	portscout
 2022-02-22 23:22:55 -08:00
Fernando Apesteguía
405f09e69e science/afni: update to 22.0.11 2022-02-22 08:19:48 +01:00
Yuri Victorovich
ad37efb8e2 science/py-hoomd-blue: Update 3.0.0-beta.13 -> 3.0.0-beta.14 
Reported by:	portscout
 2022-02-20 17:17:51 -08:00
Stephen Montgomery-Smith
5693794683 math/qhull: Renaming ports 
qhull renamed to qhull7.
qhull8 renamed to qhull.
qhull7 marked deprecated.
Dependencies updated.
 2022-02-18 15:15:30 -06:00
Thierry Thomas
495428f817 science/afni: switch to qhull from math/qhull8 
Chase my previous commits: afni uses the binary qhull as a runtime dependency.
 2022-02-18 20:21:48 +01:00
Yuri Victorovich
246fc053d8 science/py-PyNE: Update 0.7.5 -> 0.7.6 
Reported by:	portscout
 2022-02-18 09:10:05 -08:00
Yuri Victorovich
d42090bdd7 science/{,py-}segyio: Update 1.9.8 -> 1.9.9 
Reported by:	portscout
 2022-02-18 09:10:05 -08:00
Dima Panov
dc11e63efe science/grib_api: use openjpeg15 includes in Right Way (tm) 
Sponsored by:	Netzkommune GmbH
 2022-02-18 12:04:50 +03:00
Fernando Apesteguía
d81269bd74 science/afni: update to 22.0.10 2022-02-17 08:58:06 +01:00
Thierry Thomas
1934391064 science/tfel: upgrade to 4.0.0 
Release notes at <http://tfel.sourceforge.net/release-notes-4.0.html>.
 2022-02-16 17:29:01 +01:00
Yuri Victorovich
4ea352dd7a science/ascent: Update 0.7.1-66 -> 0.8.0 
Reported by:	portscout
 2022-02-13 13:35:46 -08:00
Yuri Victorovich
9e2fc35fd8 science/conduit: Update 0.8.1 -> 0.8.2 
Reported by:	portscout
 2022-02-13 13:35:45 -08:00
Yuri Victorovich
330486509e science/jmol: Update 14.32.20 -> 14.32.21 
Reported by:	portscout
 2022-02-13 09:38:22 -08:00
Yuri Victorovich
04d5a2dccb science/phonopy: Update 2.11.0 -> 2.13.1 
Reported by:	portscout
 2022-02-13 09:38:20 -08:00
Yuri Victorovich
7306b4e805 science/hypre: Update 2.23.0 -> 2.24.0 
Reported by:	portscout
 2022-02-13 09:38:19 -08:00
Fernando Apesteguía
6807eecac8 science/afni: update to 22.0.09 2022-02-12 20:20:53 +01:00
Fernando Apesteguía
b08d3ad6fd science/afni: udpate to 22.0.07 2022-02-11 08:07:01 +01:00
Fernando Apesteguía
a791f77ab3 science/afni: update to 22.0.06 2022-02-10 13:24:14 +01:00
Fernando Apesteguía
6ff489d345 science/gramps: update to 5.1.5 
ChangeLog: https://github.com/gramps-project/gramps/releases/tag/v5.1.5

Reported by:	portscout
 2022-02-10 10:37:07 +01:00
Loïc Bartoletti
da4d171b0c science/scidavis: Update to 2.7 and use sip6 
PR:		261736
Approved by:	makc (maintainer)
 2022-02-08 18:31:14 +01:00
Tobias C. Berner
e6e9fd72c4 KDE: Update KDE Gear to 21.12.2 (bug fix release) 
Thursday, 3 February 2022

Over 120 individual programs plus dozens of programmer libraries and
feature plugins are released simultaneously as part of KDE Gear.

Today they all get new bugfix source releases with updated translations.

Full changelog:
	https://kde.org/announcements/changelogs/gear/21.12.2/
 2022-02-07 17:33:10 +01:00
Yuri Victorovich
9e2d2608f5 science/elk: Update 8.3.15 -> 8.3.22 
Reported by:	portscout
 2022-02-06 09:43:12 -08:00
Yuri Victorovich
2364130391 science/avogadro2: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:22 -08:00
Yuri Victorovich
e5acfa3afb science/py-avogadrolibs: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:22 -08:00
Yuri Victorovich
3b62222a6c science/avogadrolibs: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:21 -08:00
Yuri Victorovich
132ac4baaf science/jmol: Update 14.32.16 -> 14.32.20 
Reported by:	portscout
 2022-02-05 01:20:21 -08:00
Yuri Victorovich
c5921be582 science/dakota: Update 6.13.0 -> 6.15.0 2022-02-03 02:05:09 -08:00
Jose Alonso Cardenas Marquez
0de5507c16 lang/fpc: Fix build issue on lazarus i386 and amd64 
- Bump PORTREVISION
- Disable some default OPTIONS
Obtained from:	https://forum.lazarus.freepascal.org/index.php/topic,57752.msg429737.html#msg429737
 2022-02-03 00:07:13 -05:00
Yuri Victorovich
503e872fc2 science/chrono: Enable the OpenGL module. 2022-01-30 10:39:57 -08:00
Yuri Victorovich
0da23b0d6b science/chrono: Update 6.0.0 -> 7.0.1 2022-01-29 22:01:48 -08:00