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28 commits

Author SHA1 Message Date
Rene Ladan
0417f3eeb4 Drop maintainership BOINC ports, old machine running them gave up. 2014-02-04 17:54:29 +00:00
Rene Ladan
94066acc1a The hmmer binary was renamed upstream to indicate that it is now an 
archive file, adjust the port so that fetch and extract work again.
 2013-12-29 10:41:50 +00:00
Rene Ladan
652c8e10fe Several fixes: 
- install files as the BOINC user/group, this ensures that work units can
  be downloaded and sent
- try to remove ~boinc/projects if empty
- do not specify -o and -g parameters to ${INSTALL}, this ensures the
  package can be built as user
- only extract the hmmer binary from the hmmer distribution file, this
  ensures correct permissions when modifying app_info.xml as user
- Bump PORTREVISION

Reviewed by:	bapt
 2013-12-23 18:03:15 +00:00
Rene Ladan
70f577a3ad Use value of BOINC_CLIENT_HOME in pkg-message 2013-09-24 12:00:40 +00:00
Rene Ladan
daefaaa864 - Add stagedir support 
- Rewrap lines
 2013-09-23 22:01:22 +00:00
Rene Ladan
e6b40643d7 Respect 'make check-sanity' for this port too. 2013-09-23 19:54:50 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Rene Ladan
59140a81a3 Use bsd.port.options.mk instead of bsd.port.{pre|post}.mk 2013-04-29 12:20:35 +00:00
Rene Ladan
a155d81752 Remove compatibility with FreeBSD 7.X 
While here pet Makefile headers.
 2013-03-06 23:31:58 +00:00
Rene Ladan
b29162eed1 Take over maintainership. 
Approved by:	pav (previous maintainer)
 2012-12-28 21:59:42 +00:00
Rene Ladan
b06829187f Use the new project URL to let the application attach coorectly to the 
project, and some cleanups:
- use optionsNG
- update commands in pkg-install.in
- improve %%AMD64%% comment handling
- convert Makefile header
- remove unused variable SIMAP_URL

Bump PORTREVISION

PR:		ports/174748
Submitted by:	myself
Approved by:	maintainer (pav@)
 2012-12-27 20:12:06 +00:00
Pav Lucistnik
c4e07de974 - Adjust BOINC_* variables to be consistent with new system in boinc-client 2012-05-16 13:46:30 +00:00
Pav Lucistnik
a1e47d45d2 - Fix fetch and update WWW 2011-11-04 20:39:12 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Pav Lucistnik
39b767908d - Update the libmap instructions for amd64/8 
Submitted by:	Rick van der Zwet <info@rickvanderzwet.nl>
 2010-07-29 08:30:24 +00:00
Dirk Meyer
de78af3ac5 - update to 1.4.1 
Reviewed by:	exp8 run on pointyhat
Supported by:	miwi
 2010-03-28 06:47:48 +00:00
Dirk Meyer
ca9c60461c - update to jpeg-8 2010-02-05 11:46:55 +00:00
Pav Lucistnik
975c364f32 - Annotate that 8.x no longer needs libmap hack 
Reported by:	rene
 2009-10-01 07:34:28 +00:00
Pav Lucistnik
c4d4cacd63 - Remove conditional checks relevant only on FreeBSD 5.x and older 2009-01-05 17:27:29 +00:00
Edwin Groothuis
6527ef2070 Bump portrevision due to upgrade of devel/gettext. 
The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
 2008-06-06 13:08:29 +00:00
Edwin Groothuis
b9b294b8fc implement @dirrmtry macro for the pkg-plist 2008-04-19 00:24:21 +00:00
Pav Lucistnik
5ce82a190b - Runs on 7.0-CURRENT with compat6x 
Reported by:	Rene Ladan <r.c.ladan@gmail.com>
 2007-07-08 11:56:59 +00:00
Florent Thoumie
d4f0d0048a - Welcome X.org 7.2 \o/. 
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
 2007-05-19 20:36:56 +00:00
Pav Lucistnik
deff0d8ddd - Add hmmer 5.09 application 2006-10-10 11:31:42 +00:00
Pav Lucistnik
61fa65e53c - Update to 5.10 2006-07-17 21:44:52 +00:00
Pav Lucistnik
eb9164cdb6 - Provide SSE optimized application as an option 2006-06-24 21:04:45 +00:00
Pav Lucistnik
ac3d6b8aa7 - Instruct amd64 users to libmap libpthread.so.2 to libc_r.so.6 2006-06-22 18:53:30 +00:00
Pav Lucistnik
15299a017f SIMAP (Similarity Matrix of Proteins) is a public database of pre-calculated 
protein similarities that plays a key role in many bioinformatics methods. It
contains about all currently published protein sequences and is continuously
updated.

The computational effort for keeping SIMAP up-to-date is constantly increasing.
Please help to update SIMAP by calculating protein similarities on your
computer.

WWW: http://boinc.bio.wzw.tum.de/boincsimap/
 2006-06-19 20:32:08 +00:00