kpriv/freebsd-ports
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
329466 commits 42 branches 80 tags 2.7 GiB
Commit graph

41 commits

Author SHA1 Message Date
John Marino
e06d29ed1c biology/fasta3: Checked new distfile and regenerated distinfo to unbreak 
Fasta3 distfile was significantly changed.  This should have been released
as a new version (e.g. 36.3.6e), so it's not clear why the distfile was
rerolled.  There are significant changes to makefiles, conf files and even
a few .c and .h files.  They all look like legitimate updates to me
though.

Set DIST_SUBDIR since this port is now known for rerolling, then
regenerate distinfo.  Also add Fasta license and bump revision.
 2014-03-02 10:58:50 +00:00
Baptiste Daroussin
4be4ab0c7e Mark as broken: Invalid checksum, seems like the software was rerolled 2014-01-03 19:46:05 +00:00
Pawel Pekala
dfc46ed8d1 Update to version 36.3.6d 
PR:		ports/181883
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
 2013-10-29 19:32:15 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Sunpoet Po-Chuan Hsieh
7684922546 - Use single space after WWW: 2013-09-07 17:20:21 +00:00
Wen Heping
50ee70d703 - Update to 36.3.6 
- Drop maintainership
 2013-07-19 14:08:02 +00:00
Wen Heping
baa9b66158 - Take maintainership 2012-10-01 14:55:55 +00:00
Thomas Abthorpe
d46aafc64e - Reassign to the heap at maintainer's request 2012-10-01 14:45:16 +00:00
Eitan Adler
7e3b32fff8 - remove maintainer tags from pkg-descr 
Approved by:	portmgr
Approved by:	bapt (mentor)
 2011-10-22 23:50:23 +00:00
Beat Gaetzi
ae9f790ad1 - Update to 36.3.2 to fix distfile fetching on pointyhat 
PR:		ports/154267
Submitted by:	Fernan Aguero <fernan AT iib.unsam.edu.ar> (maintainer)
Feature safe:	yes
 2011-01-26 20:26:36 +00:00
Max Brazhnikov
677abde4b7 Update to 35.4.9 
PR:		ports/137991
Submitted by:	Fernan Aguero (maintainer)
 2009-08-23 15:47:37 +00:00
Ion-Mihai Tetcu
e110a3719d - Update to 35.4.7 [1] 
- Obey PREFIX [2]

Submitted by:	maintainer [1] [2]
Reported by:	QATty [2]
 2009-06-09 07:53:37 +00:00
Dmitry Marakasov
6aa54f51cd - Add forgotten patch 2009-02-23 16:13:19 +00:00
Dmitry Marakasov
bb0af38121 - Update to 35.4.4 
PR:		132007
Submitted by:	Fernan Aguero <fernan at iib dot unsam dot edu dot ar> (maintainer)
 2009-02-23 16:12:23 +00:00
Cheng-Lung Sung
1f16f8b132 - Update to 35.3.6 
PR:		ports/122607
Submitted by:	maintainer (Fernan Aguero)
 2008-04-10 08:09:10 +00:00
Rong-En Fan
0e77ef5912 - Update to 35.3.5 
- Switch to .tar.gz distfile so that we don't define our do-extract
- While I'm here, using substitution for version numbers in pkg-plist
  for easier upgrade

PR:		ports/121690
Submitted by:	Wen heping <wenheping at gmail.com>
Approved by:	maintainer timeout (2 weeks)
 2008-03-30 05:07:36 +00:00
Martin Wilke
572ad4f218 - Update to 34.26.2 
PR:             110079
Submitted by:   Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer)
 2007-03-09 11:26:13 +00:00
Martin Wilke
37c6f45ce2 - Update to 34.t26.b3 
PR:		ports/104508
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2006-10-31 09:02:04 +00:00
Pav Lucistnik
3181cf2cce - Update to 34.t25.d9 
PR:		ports/98761
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2006-06-09 19:18:08 +00:00
Erwin Lansing
f0dcdd522f - Update to 34.t25.d8 [1] 
- While I'm here, pet portlint [2]

PR:		98398 [1]
Submitted by:	miwi [1], self [2]
Approved by:	maintainer [1]
 2006-06-05 21:18:23 +00:00
Sergey Matveychuk
45d46bd0a5 - update to 34.t25.d7 
- add MASTER_SITE_LOCAL as a second master site

PR:		ports/97310
Submitted by:	maintainer
 2006-05-24 16:55:46 +00:00
Kris Kennaway
b8bfb594a1 BROKEN: Unfetchable 2006-05-21 21:40:02 +00:00
Sergey Matveychuk
edab74313c - Update to 34.t25.d6 
PR:		ports/96063
Submitted by:	maintainer
 2006-05-07 16:52:33 +00:00
Pav Lucistnik
763955a476 - Update to 34.t25.d5 
PR:		ports/94741
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2006-03-20 22:23:24 +00:00
Sam Lawrance
f4cdc25a87 Update to 34.t25.d4. 
PR:		ports/93052
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2006-02-10 09:37:02 +00:00
Edwin Groothuis
acd87b4ad8 SHA256ify 
Approved by:    krion@
 2006-01-22 08:34:46 +00:00
Mark Linimon
11bda5392b Chase mastersite and fix checksum to unbreak. (Changes are inclusion of a 
logfile, one Linux-only change, and one change in a test script).  Assign
submitter as new maintainer as current one has not responded to PRs for
some time.

PR:		ports/68199
Submitted by:	Fernan Aguero <fernan at iib dot unsam dot edu dot ar>
 2004-07-01 03:02:23 +00:00
Kris Kennaway
3c088f1b9a Set an expiry date of 2004-08-20 for these BROKEN/IGNORE/FORBIDDEN 
ports.  They will be removed on or after that date if they are still
broken and no fix has been submitted to GNATS.
 2004-06-21 21:27:46 +00:00
Trevor Johnson
8232e82f85 SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
Kris Kennaway
b8fd938dc2 BROKEN: Checksum mismatch 2004-02-21 19:31:10 +00:00
Joe Marcus Clarke
7f26bf3bf0 unPERLify by using REINPLACE_CMD and SED where appropriate. 
PR:		47654
Submitted by:	Simon 'portlint' Schubert <corecode@corecode.ath.cx>
 2003-11-15 20:13:21 +00:00
Sergey A. Osokin
958842c5c6 Cosmetic fix: use %%DOCSDIR%% macro. 
No functionally changes.

Submitted by:	Oleg Karachevtsev <ok@etrust.ru>
A part of PR:	57992
 2003-10-22 09:37:18 +00:00
Ade Lovett
7e52725f2a Clear moonlight beckons. 
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
 2003-03-07 06:14:21 +00:00
Kris Kennaway
56881e441f Prefer <limits.h> over <values.h> as the latter has been removed from 
-current.

Noticed by:	bento
 2002-08-23 03:36:33 +00:00
Johann Visagie
6d6802e97f Replace erroneous usage of INSTALL_MAN with INSTALL_DATA. 
PR:		28666
Submitted by:	Patrick Li <pat@databits.net>
 2001-07-03 09:08:26 +00:00
Johann Visagie
afc010f63a Updating my email address in my remaining ports. 
Prompted by:	vanilla
 2001-06-27 10:15:01 +00:00
James E. Housley
ef5b919982 Updata biology/fasta3 to version 33.t08.d4 
PR:		27176
Submitted by:	Johann Visagie <johann@egenetics.com> MAINTAINER
 2001-05-07 12:16:33 +00:00
Maxim Sobolev
12df99274b Update to 33.t08.d3. 
Submitted by:	maintainer
 2001-03-22 09:04:47 +00:00
Neil Blakey-Milner
b1fd16c68d - A small bugfix lead to a rerelease without a version number change. 
- Bumped PORTREVISION.

Submitted by:	Johann Visagie <johann@egenetics.com>
PR:		25725
 2001-03-12 10:24:38 +00:00
FUJISHIMA Satsuki
f87f524546 update to 33.t08.d2. 
PR:		25609
Submitted by:	maintainer
 2001-03-08 14:39:10 +00:00
James E. Housley
a3686c5ead - New port: biology/fasta3, which comprises the FASTA3 suite of DNA and 
protein sequence search programs
- FASTA3 updates only some of the elements of FASTA2, which is why I have
  submitted ports of both versions (as biology/fasta and biology/fasta3)

PR:		24716
Submitted by:	Johann Visagie <johann@egenetics.com>
 2001-02-11 16:28:59 +00:00