Commit graph

9578 commits

Author SHA1 Message Date
Mathieu Arnold
92fbc75c13 Catch up abusive uses of ${SITE_PERL}.
Sponsored by:	Absolight
2014-12-23 02:22:19 +00:00
Johan van Selst
35e9303075 Update to Coq 8.4pl5 2014-12-22 10:45:20 +00:00
Baptiste Daroussin
5fe17006b4 Get rid of gnomehier 2014-12-21 00:32:19 +00:00
Antoine Brodin
76cfd4ca52 Convert to USES=libtool 2014-12-20 20:09:06 +00:00
Baptiste Daroussin
2f8452f907 cleanup plist 2014-12-20 19:15:31 +00:00
Antoine Brodin
b644ea1a6c Explicitely set MASTER_SITES to GHC, fityk is not available on GH 2014-12-20 18:17:32 +00:00
Antoine Brodin
e154b62762 - Use GH_COMMIT
- Use shebangfix instead of doing it manually
2014-12-20 17:56:52 +00:00
Antoine Brodin
8585fd5e17 Mark BROKEN: fails to build
/wrkdirs/usr/ports/math/vtk6/work/VTK-6.1.0/Rendering/FreeType/vtkFreeTypeTools.cxx: In member function 'bool vtkFreeTypeTools::CalculateBoundingBox(const T&, vtkFreeTypeTools::MetaData&)':
/wrkdirs/usr/ports/math/vtk6/work/VTK-6.1.0/Rendering/FreeType/vtkFreeTypeTools.cxx:1190: error: no matching function for call to 'min(unsigned int&, int&)'

Reported by:	pkg-fallout
2014-12-19 18:49:40 +00:00
Stephen Montgomery-Smith
31fb3cf622 - Fix build error with clang 3.5.0.
PR:		196127
Submitted by:	Dimitry Andric <dim@FreeBSD.org>
2014-12-19 14:59:10 +00:00
Danilo Egea Gondolfo
6165d6390e - Update from 4.550.2 to 4.550.3 2014-12-19 13:21:36 +00:00
Pawel Pekala
6588e7f54e Update to version 0.15.2
PR:		195948
Submitted by:	maintainer
2014-12-16 23:39:45 +00:00
Antoine Brodin
45b5f0bec4 Fix build 2014-12-16 16:49:19 +00:00
David Naylor
67a399008e Update math/R-cran-gss to 2.1-4.
ChangeLog:
 * R: Along with a bug fix, edited utility functions for the
      nbinomial family in the gssanova suite, eliminating unnecessary
      subtractions to preserve numerical precision.
2014-12-16 11:09:36 +00:00
Stephen Montgomery-Smith
f22ddf4986 - Change license to correct value. 2014-12-15 03:51:04 +00:00
Stephen Montgomery-Smith
9cfd0575f5 - Add optional dependency math/octave-forge-optics.
- Update to 20141214.
2014-12-14 22:11:38 +00:00
Stephen Montgomery-Smith
b31de2e539 - New port math/octave-forge-optics.
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

This is optics.
2014-12-14 22:06:49 +00:00
Antoine Brodin
75efd3aad0 Unbreak 2014-12-14 15:43:19 +00:00
Hiroki Sato
3922098b6f - Separate TeX style files from math/gnuplot into math/gnuplot-tex-extras
to eliminate huge TeXLive dependency.  Note that TeX terminal support is
  still enabled by default because it works without them.

- Add Lua dependency to support TeX/Tikz terminal.

Approved by:	glewis (maintainer)
2014-12-14 12:03:38 +00:00
Pietro Cerutti
7c5c62948d - Update to 1.3.6 2014-12-11 21:50:42 +00:00
Diane Bruce
3317196d90 - Tiny fix to f2py2e.py to allow it to deal with -fstack-protector flag
as without this fix, f2py will attempt to compile -fstack-protector

Submitted by:	db
Reviewed by:	wg
Approved by:	wg
2014-12-11 13:00:44 +00:00
Pietro Cerutti
c020107379 - Reset maintainership of my ports 2014-12-10 22:29:14 +00:00
Dmitry Marakasov
01dfda5bce - Fix strip
Suggested by:	mat
2014-12-10 15:02:02 +00:00
Dmitry Marakasov
6bae2ace9d - Fix strip 2014-12-10 12:49:51 +00:00
Johannes Jost Meixner
3da06622f6 math/py-statsmodels: update to 0.6.1, unbreak, modernize
- update to 0.6.1 and unbreak
- replace noegginfo with concurrent in USE_PYTHON

Differential Revision:	https://reviews.freebsd.org/D1287
Approved by:	swills (mentor)
2014-12-09 17:33:53 +00:00
Dmitry Marakasov
be5c138c78 - Strip library 2014-12-09 14:05:26 +00:00
Baptiste Daroussin
ebaa2758f8 cleanup plist 2014-12-09 13:20:45 +00:00
Stephen Montgomery-Smith
8c01ee7252 - Update to 6.4.1. 2014-12-08 19:55:31 +00:00
Antoine Brodin
3f594807b2 Unbreak 2014-12-08 17:53:03 +00:00
Tijl Coosemans
60945f0277 Replace USES=libtool:oldver with USES=libtool or USES=libtool:keepla in
the 32 ports that still use it.  Bump PORTREVISION on their dependent
ports except the ones that depend on these:

audio/libogg
audio/libvorbis
devel/pcre
ftp/curl
graphics/jpeg
graphics/libart_lgpl
graphics/tiff
textproc/expat2
textproc/libxslt

In these cases the same trick as in the recent gettext update is used.
The ports install a symlink with the old library version.  When enough
of their dependent ports have had regular updates the remaining ones can
get a PORTREVISION bump and the links can be removed.

Also remove the devel/pcre dependency from USE_GNOME=glib20.  It causes
over 2200 packages to depend on devel/pcre while less than 200 actually
link with it.  The glib20 package still depends on devel/pcre so this
should not make a difference for ports with USE_GNOME=glib20.  Also,
libdata/pkgconfig/glib-2.0.pc lists pcre as a private library so
USE_GNOME=glib20 should not propagate it.

PR:		195724
Exp-run by:	antoine
Approved by:	portmgr (antoine)
2014-12-08 16:48:38 +00:00
Sunpoet Po-Chuan Hsieh
e59096e905 - Remove unnecessary BUILD_DEPENDS 2014-12-08 16:18:24 +00:00
Antoine Brodin
3c9fb891d2 Unbreak 2014-12-08 11:47:26 +00:00
Mark Felder
f7f3a97a4d Update "BSD" license in math category 2014-12-07 16:31:50 +00:00
Stephen Montgomery-Smith
8a80f53a2f - Update to 6.4. 2014-12-07 16:01:20 +00:00
Antoine Brodin
72dc15db45 Canonicalize a few licenses 2014-12-07 00:07:47 +00:00
Sunpoet Po-Chuan Hsieh
1d0aec2b20 - Update to 0.34
Changes:	http://search.cpan.org/dist/Math-GSL/Changes
2014-12-06 19:05:10 +00:00
Danilo Egea Gondolfo
e05a651b49 - Update from 4.550.1 to 4.550.2 2014-12-05 14:55:58 +00:00
David Naylor
9d5f1268c4 Update math/R-cran-car to 2.0-22.
Changes to Version 2.0-22
 * corrected bug in 'terms' argument in residualPlots, and other graphic
   functions with a 'terms' argument
 * added residual curvature tests for glm.nb
 * mcPlot and mcPlot draw 'marginal/conditional' plots for lm objects.  The
   marginal plot is of the centered response versus a centered regressor; the
   conditional plot is the corresponding added-variable plot.  The plots can be
   overlaid or viewed side-by-side.
 * added argument marginal.scale to avPlots to scale the added-variable plot for
   Y on X|Z using the scale from the marginal plot of Y vs X ignoring X.  The
   default is FALSE, corresponding to using scaling to maximize resolution or
   use xlim and ylim to set user scaling.
 * Fixed bugs in Anova.survreg() that could affect types II, II tests, both Wald
    and LR, and one similar bug in linearHypothesis.survreg().
 * Replaced calls to require() with requireNamespace() where possible
   (suggestion of Brian Ripley).
 * The following functions now produce warnings rather than errors when there
   are empty groups: scatterplot(), scatterplotMatrix(),scatter3d(),
   densityPlot().
 * Corrected name of "Blackmoor" dataset to "Blackmore".
 * Added KosteckiDillon migraines dataset (contributed by Georges Monette).
 * introduced linearHypothesis.rlm() for rlm models (suggestion of Matthieu
   Stigler).
 * Small bug fixes/improvements.
2014-12-05 12:26:36 +00:00
Jung-uk Kim
6f351b1767 Make it more libstdc++ friendly. graphics/gource now builds on 8.x and 9.x.
Approved by:	demon (maintainer)
2014-12-04 18:32:35 +00:00
Mathieu Arnold
ce8a62e100 Don't overwrite Perl's LDDLFLAGS.
With hat:	perl
Sponsored by:	Absolight
2014-12-04 14:28:37 +00:00
Dmitry Sivachenko
eba2e6d5c4 Revert to 0.9.5.4: recent version requires c++11 compiler and this update breaks
some ports on 8.x/9.x.
2014-12-04 14:06:11 +00:00
Dmitry Marakasov
c0636fc6c3 - Update to 0.15.1
PR:		195535
Submitted by:	john@saltant.com (maintainer)
2014-12-03 13:34:48 +00:00
Baptiste Daroussin
3f6c422e36 Reset maintainership:
- Lots of maintainers timeout
- unresponsive for almost a year

PR:		195059
2014-12-02 22:40:56 +00:00
Dmitry Sivachenko
e76af7f3fa Update to version 0.9.6.1 2014-12-01 13:04:07 +00:00
Tijl Coosemans
edb7229dd4 Split devel/gettext in devel/gettext-runtime and devel/gettext-tools. The
first contains runtime libraries such as libintl and the latter contains
developer tools such as msgfmt.  Ports that use gettext will usually need
a LIB_DEPENDS on gettext-runtime and a BUILD_DEPENDS on gettext-tools.

USES=gettext-runtime can be used to set a LIB/BUILD/RUN_DEPENDS on
devel/gettext-runtime and USES=gettext-tools can be used to set a
BUILD/RUN_DEPENDS on devel/gettext-tools.  USES=gettext is now the same
as "USES=gettext-runtime gettext-tools" meaning a LIB_DEPENDS on
devel/gettext-runtime and a BUILD_DEPENDS on devel/gettext-tools.

Update gettext to 0.19.3.

Remove :oldver from converters/libiconv and devel/gettext-runtime.  Leave
symlinks with the old library versions to avoid the need to bump
PORTREVISION on a large number of dependent ports.  When most of the
dependent ports have had normal version updates, PORTREVISION can be
bumped on the remaining ones (low number) and the links can be removed.

Fix some ports that installed files in lib/locale instead of share/locale.

PR:		194038
Reviewed by:	bapt
Exp-run:	antoine
Approved by:	portmgr (antoine)
2014-11-29 18:22:32 +00:00
Antoine Brodin
7eaeea789e Allow building without /usr/bin/perl symlink
PR:		ports/195494
2014-11-29 12:22:21 +00:00
Antoine Brodin
4a71368dd7 Fix build without READLINE 2014-11-29 06:38:59 +00:00
Antoine Brodin
7d0eca119c Unbreak 2014-11-28 23:18:22 +00:00
Stephen Montgomery-Smith
f4284c8164 - Update to 1.6.3. 2014-11-28 19:20:15 +00:00
Alexey Dokuchaev
44e9229fb5 altgraph is a fork of graphlib: a graph (network) package for constructing
graphs, BFS and DFS traversals, topological sort, shortest paths, etc. with
graphviz output.

WWW: https://pypi.python.org/pypi/altgraph/
2014-11-28 09:21:56 +00:00
Mathieu Arnold
eee58d187e Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
Perl version, minimizing the upgrade when the major Perl version is changed.
It uses a version dependent directory for modules with compiled bits.

As PERL_ARCH is no longer needed in plists, it has been removed from
PLIST_SUB.

The USE_PERL5=fixpacklist keyword is removed, the .packlist file is now
always removed, as is perllocal.pod.

The old site_perl and site_perl/arch directories have been kept in the
default Perl @INC for all Perl ports, and will be phased out as these old
Perl versions expire.

PR:		194969
Differential Revision:	https://reviews.freebsd.org/D1019
Exp-run by:	antoine
Reviewed by:	perl@
Approved by:	portmgr
2014-11-26 13:08:24 +00:00