Commit graph

2853 commits

Author SHA1 Message Date
Sunpoet Po-Chuan Hsieh
bc39652b82 - Fix PLIST
Notified by:	Rainer Hurling <Rainer.Hurling@rhurlin.de>
2015-01-18 16:55:56 +00:00
Sunpoet Po-Chuan Hsieh
6e5edf87e4 - Update to 1.8.14
- Update MASTER_SITES
- Use INSTALL_TARGET=install-strip instead of MAKE_ENV=INSTALL_STRIP_FLAG=${STRIP}
- Bump PORTREVISION for science/hdf5 shlib change

Changes:	http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.14-RELEASE.txt
		http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
2015-01-18 10:39:51 +00:00
Sunpoet Po-Chuan Hsieh
5448583838 - Use INSTALL_TARGET=install-strip instead of STRIP_CMD 2015-01-18 10:36:11 +00:00
Sunpoet Po-Chuan Hsieh
e54ac542e0 - Use INSTALL_TARGET=install-strip instead of MAKE_ENV=INSTALL_STRIP_FLAG=${STRIP} 2015-01-18 10:35:43 +00:00
Rong-En Fan
8ed73fa040 Drop maintainership as I no longer use these software nor have time and
energy to keep up.
2015-01-16 17:28:13 +00:00
Johannes Jost Meixner
efea8ccd01 science/py-h5py: upgrade to 2.4.0
- upgrade to 2.4.0

Differential Revision:	https://reviews.freebsd.org/D1456
Approved by:	koobs (mentor)
2015-01-13 11:23:25 +00:00
Antoine Brodin
39d8f44299 Mark BROKEN: Depends on conflicting guile and guile2 (via libctl)
Reported by:	pkg-fallout
2015-01-11 19:00:46 +00:00
Dmitry Sivachenko
3a18883882 Switch default python3 version from 3.3 to 3.4.
Bump PORTREVISIONs for the affected ports.

Exp-run by:	antoine
2015-01-10 23:15:27 +00:00
Thierry Thomas
fb11b4fe19 Uses blaslapack.mk. 2015-01-10 15:33:26 +00:00
Kurt Jaeger
bb733d3e6a science/mcstas: USE_BISON is not used
Submitted by:	az
2015-01-05 18:23:27 +00:00
Kurt Jaeger
3f47451a0e New port: science/mcstas-comps
McStas component library for McStas, a tool for simulating neutron
instrumentation and experiments using a ray-tracing formalism.
Currently the main use of McStas is in the field of instrument
design.

WWW: http://www.mcstas.org

PR:		194847
Submitted by:	Erik B. Knudsen <erkn@fysik.dtu.dk>
2015-01-05 09:38:16 +00:00
Kurt Jaeger
2f70efd363 New port: science/mcstas
Monte Carlo ray tracing simulations of neutron experiments.

McStas is a tool for simulating neutron instrumentation and experiments
using a ray-tracing formalism. Currently the main use of McStas is
in the field of instrument design.

WWW: http://www.mcstas.org

PR:		194846
Submitted by:	Erik B. Knudsen <erkn@fysik.dtu.dk>
2015-01-05 09:15:55 +00:00
Sunpoet Po-Chuan Hsieh
7b4b7c3050 - Update to 0.101
- Add LICENSE
- Sort PLIST

Changes:	http://search.cpan.org/dist/Geo-WebService-Elevation-USGS/Changes
2015-01-04 17:12:32 +00:00
Rene Ladan
ffb4e0d1a0 science/mpb: put option helpers at the correct place
Submitted by:	antoine via #bsdports
2015-01-04 14:02:35 +00:00
Rene Ladan
88cd723740 Resurrect science/mpb, pass maintainership to PR submitter.
- update to 1.5
- change to lang/guile2
- fix up USES and post-patch
- add optional dependency on math/nlopt
- install header files

PR:		196179
Submitted by:	Rainer Hurling
2015-01-04 13:55:52 +00:00
Rene Ladan
c818bdfc82 science/libctl: update to 3.2.2
- use lang/guile2 instead of lang/guile
- add pkgconfig to USES
- add option to use lang/nlopt
- strip libraries

PR:		196175
Submitted by:	Rainer Hurling
Approved by:	maintainer timeout (devel@stasyan.com, 14 days)
2015-01-04 12:56:56 +00:00
Sunpoet Po-Chuan Hsieh
d2f78922da - Update to 1.6.7
- Use INSTALL_TARGET=install-strip instead of STRIP_CMD

Changes:	https://code.zmaw.de/news/284
		https://code.zmaw.de/news/275
2014-12-28 13:14:31 +00:00
Wen Heping
cd93271c9a - Update to 1.81.03
- Reset maintainer to ports@
2014-12-27 12:38:53 +00:00
Rene Ladan
5ada0d0b07 Remove expired ports:
2014-12-27 games/secretmaryochronicles-music: Depends on expiring games/secretmaryochronicles
2014-12-27 science/mpb: Broken for more than 6 months
2014-12-27 x11-fm/pbi-thumbnailer: Broken for more than 6 months
2014-12-27 00:24:47 +00:00
Danilo Egea Gondolfo
1fa076ebfb - Update net/openmpi to 1.8.4 2014-12-26 14:24:12 +00:00
Baptiste Daroussin
bb21093773 Bump portrevision after png update 2014-12-25 20:54:41 +00:00
Antoine Brodin
7ae46e9b12 Change libpng15.so to libpng.so in LIB_DEPENDS to prepare the upgrade 2014-12-25 19:04:25 +00:00
Antoine Brodin
18ca157619 Properly support png 1.5
Obtained from:	pkgsrc
2014-12-24 16:17:19 +00:00
Muhammad Moinur Rahman
6d2e8f9aeb Change my non-FreeBSD MAINTAINER mail to bofh@
Approved by:	bapt
2014-12-24 00:14:11 +00:00
Thierry Thomas
15ecbaea3f Upgrade to 3.7.2. 2014-12-22 14:36:52 +00:00
Baptiste Daroussin
9871c1a3c7 cleanup plist 2014-12-20 19:35:10 +00:00
Antoine Brodin
bbed267f8f Mark BROKEN: fails to build
/wrkdirs/usr/ports/science/paraview/work/ParaView-v4.1.0/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx: In member function 'bool vtkFreeTypeTools::CalculateBoundingBox(const T&, vtkFreeTypeTools::MetaData&)':
/wrkdirs/usr/ports/science/paraview/work/ParaView-v4.1.0/VTK/Rendering/FreeType/vtkFreeTypeTools.cxx:1190: error: no matching function for call to 'min(unsigned int&, int&)'

Reported by:	pkg-fallout
2014-12-19 18:56:16 +00:00
Pawel Pekala
a28c9784b3 - Upadate biology/mopac to version 1.15
- Bump affected ports
- Switch ports to new mastersite, add LICENSE
- Reformat ports pkg descriptions

PR:		194493
Submitted by:	tkato432@yahoo.com
2014-12-16 22:10:23 +00:00
Tijl Coosemans
60945f0277 Replace USES=libtool:oldver with USES=libtool or USES=libtool:keepla in
the 32 ports that still use it.  Bump PORTREVISION on their dependent
ports except the ones that depend on these:

audio/libogg
audio/libvorbis
devel/pcre
ftp/curl
graphics/jpeg
graphics/libart_lgpl
graphics/tiff
textproc/expat2
textproc/libxslt

In these cases the same trick as in the recent gettext update is used.
The ports install a symlink with the old library version.  When enough
of their dependent ports have had regular updates the remaining ones can
get a PORTREVISION bump and the links can be removed.

Also remove the devel/pcre dependency from USE_GNOME=glib20.  It causes
over 2200 packages to depend on devel/pcre while less than 200 actually
link with it.  The glib20 package still depends on devel/pcre so this
should not make a difference for ports with USE_GNOME=glib20.  Also,
libdata/pkgconfig/glib-2.0.pc lists pcre as a private library so
USE_GNOME=glib20 should not propagate it.

PR:		195724
Exp-run by:	antoine
Approved by:	portmgr (antoine)
2014-12-08 16:48:38 +00:00
Mark Felder
92cd1b0812 Update "BSD" license in science category 2014-12-07 15:17:10 +00:00
Antoine Brodin
72dc15db45 Canonicalize a few licenses 2014-12-07 00:07:47 +00:00
Sunpoet Po-Chuan Hsieh
5930db6305 - Update to 1.1.1
- Strip shared library

Changes:	https://github.com/Unidata/netcdf4-python/blob/master/Changelog
PR:		ports/195356
Submitted by:	sunpoet (myself)
Approved by:	Muhammad Moinur Rahman <5u623l20@gmail.com> (maintainer)
2014-12-05 17:52:52 +00:00
Baptiste Daroussin
3f6c422e36 Reset maintainership:
- Lots of maintainers timeout
- unresponsive for almost a year

PR:		195059
2014-12-02 22:40:56 +00:00
Tijl Coosemans
edb7229dd4 Split devel/gettext in devel/gettext-runtime and devel/gettext-tools. The
first contains runtime libraries such as libintl and the latter contains
developer tools such as msgfmt.  Ports that use gettext will usually need
a LIB_DEPENDS on gettext-runtime and a BUILD_DEPENDS on gettext-tools.

USES=gettext-runtime can be used to set a LIB/BUILD/RUN_DEPENDS on
devel/gettext-runtime and USES=gettext-tools can be used to set a
BUILD/RUN_DEPENDS on devel/gettext-tools.  USES=gettext is now the same
as "USES=gettext-runtime gettext-tools" meaning a LIB_DEPENDS on
devel/gettext-runtime and a BUILD_DEPENDS on devel/gettext-tools.

Update gettext to 0.19.3.

Remove :oldver from converters/libiconv and devel/gettext-runtime.  Leave
symlinks with the old library versions to avoid the need to bump
PORTREVISION on a large number of dependent ports.  When most of the
dependent ports have had normal version updates, PORTREVISION can be
bumped on the remaining ones (low number) and the links can be removed.

Fix some ports that installed files in lib/locale instead of share/locale.

PR:		194038
Reviewed by:	bapt
Exp-run:	antoine
Approved by:	portmgr (antoine)
2014-11-29 18:22:32 +00:00
Antoine Brodin
6867beb2aa Deprecated ports broken for more than 6 months 2014-11-27 21:31:47 +00:00
Mathieu Arnold
eee58d187e Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
Perl version, minimizing the upgrade when the major Perl version is changed.
It uses a version dependent directory for modules with compiled bits.

As PERL_ARCH is no longer needed in plists, it has been removed from
PLIST_SUB.

The USE_PERL5=fixpacklist keyword is removed, the .packlist file is now
always removed, as is perllocal.pod.

The old site_perl and site_perl/arch directories have been kept in the
default Perl @INC for all Perl ports, and will be phased out as these old
Perl versions expire.

PR:		194969
Differential Revision:	https://reviews.freebsd.org/D1019
Exp-run by:	antoine
Reviewed by:	perl@
Approved by:	portmgr
2014-11-26 13:08:24 +00:00
Sunpoet Po-Chuan Hsieh
d7a7b8b3c0 - Add LICENSE
- Cleanup PLIST
2014-11-24 18:30:55 +00:00
Mathieu Arnold
0e64ad403b Fix build with Perl 5.18+. While there, add a runtime dependency on Perl, a
few installed scripts need it.

Sponsored by:	Absolight
2014-11-24 16:21:24 +00:00
Olivier Duchateau
8da18c7e44 - Update to 1.3.6
- Update website in WWW entry (pkg-descr)
2014-11-15 10:50:32 +00:00
Max Brazhnikov
b1f6dafbc4 science/kst2:
- NetCDF 4 is not supported yet, set INGORE if NETCDF option is requested.

PR:		194936
Reported by:	nwhitehorn
2014-11-13 14:26:54 +00:00
Antoine Brodin
ee9b96077b Cleanup plist 2014-11-12 18:48:53 +00:00
Wen Heping
5165bc079c - Update to 1.81.02 2014-11-08 23:45:16 +00:00
Rene Ladan
2f08c48841 Remove expired ports:
2014-11-07 math/elmer-umfpack: Obsoleted by cad/elmerfem
2014-11-07 science/elmer-eio: Obsoleted by cad/elmerfem
2014-11-07 science/elmer-matc: Obsoleted by cad/elmerfem
2014-11-07 science/elmer-meshgen2d: Obsoleted by cad/elmerfem
2014-11-07 science/elmergrid: Obsoleted by cad/elmerfem
2014-11-07 14:58:00 +00:00
Max Brazhnikov
3b1014085c science/kst2:
- Update to 2.0.8
- Remove now needless patches
- Add option for building with Qt 5
2014-11-07 11:42:30 +00:00
Pawel Pekala
ec60b78154 - Update to version 2.38
- Sort option helpers
- Clean pkg-plist

PR:		194170
Submitted by:	tkato432@yahoo.com
2014-11-02 17:43:03 +00:00
Wen Heping
1c5d99661f - Update to 5.0.2
PR:		193902
Submitted by:	tkato432@yahoo.com
2014-10-30 12:19:02 +00:00
Dmitry Sivachenko
ff009d430c Explicitly link with libblas to avoid errors like
import sklearn.decomposition.pca
ImportError: /usr/local/lib/libcblas.so.2: Undefined symbol "cgemv_"
due to it trying to import pairwise_fast.so

PR:             194683

Update to version 0.15.2.
2014-10-30 11:52:48 +00:00
Marcus von Appen
742321c708 - Convert ports of science/ and security to new USES=python
Approved by:	portmgr (implicit)
2014-10-24 16:50:42 +00:00
Dmitry Sivachenko
7007ea4b9b Fix compilation after recent numpy patch.
Patch by thierry@FreeBSD.org, pointed out by antoine.
2014-10-23 15:23:27 +00:00
John Marino
9056a800f0 science/gromacs: Fix build on DragonFly (fix from dports) 2014-10-20 13:09:42 +00:00