2015-11-26 audio/pecl-id3: Broken for more than 6 months
2015-11-26 dns/geta: Broken for more than 6 months
2015-11-26 finance/openerp-web: Broken for more than 6 months
2015-11-26 devel/py-async: Further using of this module is not encouraged by upstream
2015-11-26 chinese/kon2: Depends on expiring chinese/cce
2015-11-26 games/linux-skulltag: Depends on expiring audio/linux-fmodapi
2015-11-26 archivers/wzip: Broken for more than 6 months
2015-11-26 databases/sybtcl: Broken for more than 6 months
2015-11-26 biology/povchem: Broken for more than 6 months
2015-11-26 audio/btc: Broken for more than 6 months
2015-11-26 astro/wmglobe: Broken for more than 6 months
2015-11-26 graphics/pyro: Broken for more than 6 months
2015-11-26 graphics/jpeg2ps: Broken for more than 6 months
2015-11-26 chinese/gugod-clean: Broken for more than 6 months
2015-11-26 comms/bforce: Broken for more than 6 months
2015-11-26 cad/geda-docs: Broken for more than 6 months
2015-11-26 chinese/cwtexttf: Broken for more than 6 months
2015-11-26 comms/zmtx-zmrx: Broken for more than 6 months
2015-11-26 astro/sky2000: Broken for more than 6 months
2015-11-26 deskutils/libopensync-plugin-file: Broken for more than 6 months
2015-11-26 databases/sqlite-ext-mobigroup: Broken for more than 6 months
2015-11-26 chinese/bg5ps: Broken for more than 6 months
2015-11-26 deskutils/x-tile: Broken for more than 6 months
2015-11-26 graphics/pure-gl: Broken for more than 6 months
2015-11-26 audio/dvda-author: Broken for more than 6 months
2015-11-26 chinese/oxim: Broken for more than 6 months
2015-11-26 editors/spe: Broken for more than 6 months
2015-11-26 audio/mpdscribble: Broken for more than 6 months
2015-11-26 cad/geda-symcheck: Broken for more than 6 months
2015-11-26 audio/linux-fmodapi: Broken for more than 6 months
2015-11-26 audio/pure-audio: Broken for more than 6 months
2015-11-26 editors/bpatch: Broken for more than 6 months
2015-11-26 benchmarks/geekbench: Broken for more than 6 months
2015-11-26 graphics/icoconvert: Broken for more than 6 months
2015-11-26 cad/geda-utils: Broken for more than 6 months
2015-11-26 deskutils/tomboy-plugin-wordcount: Broken for more than 6 months
2015-11-26 graphics/sketch: Broken for more than 6 months
2015-11-26 ftp/spegla: Broken for more than 6 months
2015-11-26 graphics/clutter-box2d: Broken for more than 6 months
2015-11-26 audio/scmpc: Broken for more than 6 months
2015-11-26 ftp/gnusget: Broken for more than 6 months
2015-11-26 comms/gpsk31: Broken for more than 6 months
2015-11-26 cad/geda-gschem: Broken for more than 6 months
2015-11-26 audio/ampache: Broken for more than 6 months
2015-11-26 cad/slffea: Broken for more than 6 months
2015-11-26 audio/cripple: Broken for more than 6 months
2015-11-26 cad/geda-gattrib: Broken for more than 6 months
2015-11-26 cad/findhier: Broken for more than 6 months
2015-11-26 biology/njplot: Broken for more than 6 months
2015-11-26 audio/wmmp: Broken for more than 6 months
2015-11-26 x11/avant-window-navigator: Broken for more than 6 months
2015-11-26 cad/geda-netlist: Broken for more than 6 months
2015-11-26 deskutils/libopensync-plugin-sunbird: Broken for more than 6 months
2015-11-26 biology/ortep3: Broken for more than 6 months
2015-11-26 astro/aa: Broken for more than 6 months
2015-11-26 french/belote: Broken for more than 6 months
2015-11-26 converters/p5-String-SetUTF8: Broken for more than 6 months
2015-11-26 cad/geda-examples: Broken for more than 6 months
2015-11-26 editors/yasnippet: Broken for more than 6 months
2015-11-26 audio/musica: Broken for more than 6 months
2015-11-26 graphics/rubyphoto: Broken for more than 6 months
2015-11-26 german/bsdpaste: Broken for more than 6 months
2015-11-26 audio/amrcoder: Broken for more than 6 months
2015-11-26 sysutils/bashburn: Broken for more than 6 months
2015-11-26 editors/e93: Broken for more than 6 months
2015-11-26 audio/tepsonic: Broken for more than 6 months
2015-11-26 astro/ephem: Broken for more than 6 months
2015-11-26 chinese/cce: Broken for more than 6 months
2015-11-26 graphics/qcread: Broken for more than 6 months
2015-11-26 databases/py-sqlkit: Broken for more than 6 months
2015-11-26 databases/usogres: Broken for more than 6 months
2015-11-26 cad/libgeda: Broken for more than 6 months
2015-11-26 chinese/p5-Lingua-ZH-BPMFConvert: Broken for more than 6 months
2015-11-26 french/alphabet_sounds_fr: Broken for more than 6 months
2015-11-26 deskutils/mrundlg: Broken for more than 6 months
2015-11-26 databases/erlang-mysql: Broken for more than 6 months
2015-11-26 graphics/linux-XnViewMP: Broken for more than 6 months
2015-11-26 deskutils/akamaru: Broken for more than 6 months
2015-11-26 dns/p5-Net-DNS-ZoneCheck: Broken for more than 6 months
2015-11-26 astro/dgpsip: Broken for more than 6 months
2015-11-26 databases/pecl-handlersocket: Broken for more than 6 months
2015-11-26 audio/cymbaline: Broken for more than 6 months
2015-11-26 french/dico: Broken for more than 6 months
2015-11-26 comms/qpage: Broken for more than 6 months
2015-11-26 audio/sonice: Broken for more than 6 months
2015-11-26 cad/geda-symbols: Broken for more than 6 months
2015-11-26 databases/java-mybatis: Broken for more than 6 months
2015-11-26 databases/openbase-jdbc: Broken for more than 6 months
2015-11-27 www/mediawiki119: Please upgrade to mediawiki-1.25
2015-11-28 www/R-cran-Rpad: Unmaintained upstream
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.
This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.
Approved by: portmgr (bapt)
modular xorg.
- supply corresponding USE_XORG for all imake-using ports that need it
- USE_IMAKE no longer implies USE_XLIB in absence of USE_XORG
- retire USE_X_PREFIX which is not really used anywhere after the
above change
- a few minor nits like whitespace and SF macro
Tested by: 2 tinderbox runs by pav
Approved by: portmgr (pav)
in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
package). NJplot is especially convenient for rooting the unrooted trees
obtained from parsimony, distance or maximum likelihood tree-building methods.
The package contains the following programs:
njplot - draw phylogenetic trees and interactively modify them
newicktops - non-interactive version rendering into a PostScript file
newicktotxt - non-interactive version rendering into a text file
unrooted - draw unrooted circular trees
If you use NJplot in a published work, please cite the following reference:
Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
biological sequence banks. Biochimie, 78, 364-369.
WWW: http://pbil.univ-lyon1.fr/software/njplot.html
PR: ports/118438
Submitted by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
