Commit graph

14341 commits

Author SHA1 Message Date
Yuri Victorovich
fcea573684 misc/openvdb: Update 6.1.0 -> 7.0.0
Reported by:	VVD <vvd@unislabs.com> (in bug#244347)
2020-04-02 01:32:07 +00:00
TAKATSU Tomonari
9cb07248ad - Update to 2020.2 2020-04-01 21:29:40 +00:00
Thierry Thomas
94d050301a - Build and install the library with its headers;
- Since I'm there, borrow several patches from the SageMath project.

Approved by:	yuri (maintainer)
2020-04-01 20:42:40 +00:00
Loïc Bartoletti
fd7ef51025 databases/grass7, math/saga, graphics/qgis and graphics/qgis-ltr: update to latest versions
- math/saga:
        - Update to 7.6.2
        - Use wxWidgets 3.0+ instead of 3.1+ since 3.1 is not a mandatory version and this reduces the number of packages installed when you install saga and qgis/grass (which requires version 3.0).

    - databases/grass7:
        - Update to 7.8.2 first version for python3 only
        - Use ${PY_NUMPY} variable
        - Readd openmp
        - Use wxPython40 for python3
        - Remove bash dependency. You can use any shell.
        - Rework the workaround in post-install (for / touch files). Fix the long (random) standing issue with pkg-plist
        - Alphabetize USES and OPTIONS
        - Replace XX_configure_on by XX_configure_with as possible

    - graphics/qgis:
        - Update to 3.12.1
        - Remove patches (applied upstream or fixed in ports: pyqt5 / sip)

    - graphics/qgis-ltr:
        - Update to 3.10.4

PR:             241892, 244979
Reported by:    rainer hurling (maintainer), lbartoletti (maintainer)
Reviewed by:    tcberner (mentor), rainer hurling (maintainer)
Approved by:    tcberner (mentor), rainer hurling (maintainer)
Differential Revision:  https://reviews.freebsd.org/D24198
2020-04-01 19:59:45 +00:00
TAKATSU Tomonari
93aa81c942 - Update to 0.4-8.6 2020-04-01 17:28:41 +00:00
Ganael LAPLANCHE
555ae57247 Update devel/tbb to 2020.2 and bump dependent port's revisions
Changelog: https://github.com/oneapi-src/oneTBB/blob/tbb_2020/CHANGES
2020-04-01 14:14:51 +00:00
Thierry Thomas
54d8521f48 Resurrect rw, with PKGNAME=rankwidth, and set a conflict with sysutils/rw. 2020-04-01 09:36:48 +00:00
TAKATSU Tomonari
ffeba17f30 - Update to 0.9-7 2020-04-01 03:52:03 +00:00
Sunpoet Po-Chuan Hsieh
ba89ee3702 Update WWW
Approved:	portmgr (blanket)
2020-03-31 23:18:42 +00:00
Sunpoet Po-Chuan Hsieh
ea88d399d7 Update to 3.2.7
Changes:	https://github.com/rpy2/rpy2/blob/master/NEWS
2020-03-31 23:03:46 +00:00
Sunpoet Po-Chuan Hsieh
2c19c3d55f Update to 0.8.26
Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
2020-03-31 23:03:41 +00:00
Stephen Montgomery-Smith
d18bac3d70 - Update to 1.4.2. 2020-03-31 21:12:05 +00:00
Yuri Victorovich
cddb429ce7 math/symmetrica: Fix WWW 2020-03-31 21:07:03 +00:00
Antoine Brodin
8475f26414 Remove math/rankwidth, PKGBASE collision with sysutils/rw
With hat:	portmgr
2020-03-31 20:25:18 +00:00
Dmitry Marakasov
183b6c6366 Bump PORTREVISION after the previous change 2020-03-31 18:38:01 +00:00
Dmitry Marakasov
4aeefd7046 Switch to pyglet150 2020-03-31 18:37:33 +00:00
Thierry Thomas
c69dbae517 Adding BRiAl, a library for polynomials over boolean rings, and its Python
module.

To be used by SageMath.
2020-03-31 17:28:25 +00:00
Thierry Thomas
dcfae172f2 Adding rankwidth / rw, a program to calculate rank-width and rank-
decompositions.

To be used by SageMath.
2020-03-31 17:25:31 +00:00
Sunpoet Po-Chuan Hsieh
940a4e0ec4 Sort SUBDIRs 2020-03-31 13:51:08 +00:00
Piotr Kubaj
6f8678f8df math/p5-Math-Pari: fix build on powerpc(64) head
powerpc and powerpc64 need -fPIC when using clang 10:
ld: error: relocation R_PPC64_TOC16_LO cannot be used against symbol issquarefree; recompile with -fPIC
2020-03-31 13:17:53 +00:00
TAKATSU Tomonari
2ac6f01968 - Update to 0.3.3 2020-03-31 05:32:11 +00:00
TAKATSU Tomonari
28f43fed6e - Add new port: math/R-cran-raster
Reading, writing, manipulating, analyzing and modeling of gridded
  spatial data. The package implements basic and high-level functions.
  Processing of very large files is supported. There is a also support
  for vector data operations such as intersections.

  WWW: https://cran.r-project.org/web/packages/raster/
2020-03-31 03:24:53 +00:00
Mark Linimon
2057734741 Add compiler:c++11-lang to USES to fix build on GCC-based systems:
../include/Lcommon.h:72: error: ISO C++ forbids declaration of 'i' with no type

Approved by:		portmgr (tier-2 blanket)
2020-03-31 01:16:02 +00:00
Muhammad Moinur Rahman
85e1af6fa6 math/jacal: Update version 1c4=>1c7
- Remove USES=perl5
- Add USES=makeinfo
- Clean the patches

Relnotes:	https://people.csail.mit.edu/jaffer/JACAL_ANNOUNCE.txt
2020-03-30 20:47:10 +00:00
Thierry Thomas
ccf271ff1c Adding planarity, the Edge Addition Planarity Suite, to be used by SageMath. 2020-03-30 15:27:19 +00:00
Thierry Thomas
4c2e6fba07 Adding lrcalc, a Littlewood-Richardson Calculator to be used by SageMath. 2020-03-30 15:25:42 +00:00
Thierry Thomas
d9d39e0a5b Adding lcalc, the L-function c++ class library and, the command line program
lcalc, to be used by SageMath.

Remark: this is not the latest version, but the one currently used by Sage,
with their patches.
2020-03-30 12:40:37 +00:00
Fernando Apesteguía
c85d1b0954 math/geogebra: Update to 5.0.574.0
PR:	245140
Submitted by:	uzsolt@uzsolt.hu (maintainer)
2020-03-30 05:52:12 +00:00
Yuri Victorovich
0a715cbf30 math/ensmallen: Update 2.11.5 -> 2.12.0
Reported by:	portscout
2020-03-29 23:11:38 +00:00
Kirill Ponomarev
97a4628626 Bump PORTREVISION on *-sbcl ports after lang/sbcl upgrade. 2020-03-29 10:43:21 +00:00
Thierry Thomas
d09aeeb132 C++11 language features are needed.
PR:		245112
Submitted by:	canardo909 (at) gmx.com
2020-03-28 21:05:11 +00:00
Yuri Victorovich
8a53280de1 math/py-keras: Take maintainership 2020-03-28 20:53:01 +00:00
Thierry Thomas
f6ab14221b Adding some PARI/GP related packages, to be used by SageMath:
- gp2c: Package for translating GP routines into C
- pari_elldata: Elliptic Curve Data for PARI/GP
- pari_galdata: Data needed by PARI/GP for polgalois
- pari_galpol: Database of Galois polynomials for PARI/GP
- pari_nftables: Repackaging of the historical megrez number field tables
- pari_seadata: Modular polynomials for PARI/GP
2020-03-28 18:37:49 +00:00
Sunpoet Po-Chuan Hsieh
f0149cdaa1 Update to 0.4.0
Changes:	https://github.com/facebookresearch/nevergrad/releases
		https://github.com/facebookresearch/nevergrad/blob/master/CHANGELOG.md
2020-03-28 12:54:38 +00:00
Sunpoet Po-Chuan Hsieh
2641818e01 Update to 0.8.25
Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
2020-03-28 12:54:33 +00:00
Sunpoet Po-Chuan Hsieh
ab836cc0fa Update to 0.17.1 and unbreak this port
Changes:	https://github.com/openai/gym/blob/master/README.rst#whats-new
2020-03-28 12:54:28 +00:00
Rene Ladan
32cf9e1bf6 Return Neels ports to the pool on his request.
Submitted by:	neelc@neelc.org (former maintainer) via freebsd-ports
2020-03-28 11:26:58 +00:00
Lorenzo Salvadore
34dc4b13ba math/wxmaxima: Remove obsolete patch
According to 20200115 entry of CHANGES man pages can (and should) now be
installed in ${PREFIX}/share/man. This obsoletes
wxmaxima/files/patch-data_CMakeLists.txt.

While here I also fixed sorting in pkg-plist.

Approved by:	gerald (mentor)
Differential Revision:	https://reviews.freebsd.org/D24205
2020-03-27 20:48:53 +00:00
Thierry Thomas
e579fe0130 Adding gf2x, a library for multiplying polynomials over the binary field.
To be used from SageMath and NTL.
2020-03-27 19:08:00 +00:00
Gleb Popov
3086d6bc15 math/stp and math/cryptominisat: Use correct patch (at STP side) for specifying dependency on
cryptomisat.
2020-03-27 14:59:07 +00:00
Thierry Thomas
1152a7a750 Adding Cliquer, a set of C routines for finding cliques in an arbitrary
weighted graph.

To be used by SageMath.
2020-03-27 13:54:58 +00:00
Mark Linimon
5eddcc98cc Add c++11-lang to USES to fix build on GCC-based systems:
configure: error: *** A compiler with support for C++11 language features is required.

Approved by:	portmgr (tier-2 blanket)
2020-03-27 06:56:51 +00:00
Thierry Thomas
5aede0e5de Add an option to build the support of NTL.
Set the option by default, because it is used by SageMath.

PR:		245085
Approved by:	yuri (maintainer)
2020-03-26 21:37:25 +00:00
Thierry Thomas
325cdfb849 Adding m4ri. M4RI is a library for fast arithmetic with dense matrices over F2.
It can be used by SageMath.
2020-03-26 16:25:42 +00:00
Thierry Thomas
5ffb8ad723 Adding eclib. The eclib package includes mwrank (for 2-descent on elliptic
curves over Q) and modular symbol code used to create the elliptic curve
database.

It can be used by SageMath.
2020-03-26 16:23:25 +00:00
Yuri Victorovich
9b5ed59b75 math/boolector: Update 3.2.0 -> 3.2.1
Reported by:	portscout
2020-03-26 07:35:49 +00:00
Antoine Brodin
75fc766164 Unbreak INDEX 2020-03-25 15:36:06 +00:00
Diane Bruce
0595d2c1ca rename to match portname 2020-03-25 12:44:50 +00:00
Diane Bruce
f52733af6e Python-FCL is an (unofficial) Python interface for the Flexible Collision
Library (FCL), an excellent C++ library for performing proximity and
collision queries on pairs of geometric models. Currently, this package
is targeted for FCL 0.5.0.

WWW: https://libraries.io/pypi/python-fcl
2020-03-25 01:00:13 +00:00
Diane Bruce
9676d6bc1e This is a snapshot version of FCL at 0.5.0 mainly to support
python-fcl otherwise please use the fcl port.
N.B. python-fcl also needs octomap

FCL is a library for performing three types of proximity queries on a pair of
geometric models composed of triangles.

It performs:
* Collision detection: detecting whether the two models overlap, and optionally,
  all of the triangles that overlap.
* Distance computation: computing the minimum distance between a pair of models,
  i.e., the distance between the closest pair of points.
* Tolerance verification: determining whether two models are closer or farther
  than a tolerance distance.
* Continuous collision detection: detecting whether the two moving models
  overlap during the movement, and optionally, the time of contact.
* Contact information: for collision detection and continuous collision
  detection, the contact information (including contact normals and contact
  points) can be returned optionally.
2020-03-25 00:47:14 +00:00