27 lines
712 B
Makefile
27 lines
712 B
Makefile
PORTNAME= pysam
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DISTVERSION= 0.22.0
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CATEGORIES= biology python
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MASTER_SITES= PYPI
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PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Python module for reading, manipulating and writing genomic data sets
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WWW= https://github.com/pysam-developers/pysam
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LICENSE= MIT
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LICENSE_FILE= ${WRKSRC}/COPYING
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LIB_DEPENDS= libhts.so:biology/htslib
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USES= gmake python:3.8-3.9
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USE_PYTHON= distutils autoplist cython cython_run
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BINARY_ALIAS= make=${GMAKE}
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MAKE_ENV= HTSLIB_MODE=external \
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HTSLIB_LIBRARY_DIR=${LOCALBASE}/lib \
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HTSLIB_INCLUDE_DIR=${LOCALBASE}/include
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post-install:
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@${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pysam/lib*${PYTHON_EXT_SUFFIX}.so
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.include <bsd.port.mk>
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