29 lines
779 B
Makefile
29 lines
779 B
Makefile
PORTNAME= hisat2
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DISTVERSIONPREFIX= v
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DISTVERSION= 2.2.1
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PORTREVISION= 2
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CATEGORIES= biology perl5 python
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Alignment program for mapping next-generation sequencing reads
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LICENSE= GPLv3
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LICENSE_FILE= ${WRKSRC}/LICENSE
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ONLY_FOR_ARCHS= aarch64 amd64 powerpc64 powerpc64le riscv64
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ONLY_FOR_ARCHS_REASON= 64-bit code, some assembly language
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BUILD_DEPENDS= simde>0:devel/simde
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USES= gmake localbase perl5 python shebangfix
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USE_GITHUB= yes
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SHEBANG_FILES= hisat2 hisat2-build hisat2-inspect \
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*.py */*.py */*/*.py */*/*/*.py \
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scripts/*.sh evaluation/tests/HLA_novel/scripts/*.sh \
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scripts/*.pl docs_jhu/*.pl
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GH_ACCOUNT= DaehwanKimLab
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CFLAGS+= -Wno-deprecated-declarations -Wno-char-subscripts -fsigned-char
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.include <bsd.port.mk>
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