e61df5e464
sam2pairwise takes a SAM file and uses the CIGAR and MD tag to reconstruct the pairwise alignment of each read.
20 lines
383 B
Makefile
20 lines
383 B
Makefile
PORTNAME= sam2pairwise
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DISTVERSIONPREFIX= v
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DISTVERSION= 1.0.0
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CATEGORIES= biology
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Show pairwise alignment for each read in a SAM file
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LICENSE= MIT
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LICENSE_FILE= ${WRKDIR}/${PORTNAME}-${PORTVERSION}/LICENSE
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USE_GITHUB= yes
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GH_ACCOUNT= mlafave
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WRKSRC_SUBDIR= src
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ALL_TARGET= sam2pairwise
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PLIST_FILES= bin/sam2pairwise
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.include <bsd.port.mk>
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