46 lines
1.2 KiB
Makefile
46 lines
1.2 KiB
Makefile
# Created by: Fernan Aguero <fernan@iib.unsam.edu.ar>
|
|
# $FreeBSD$
|
|
|
|
PORTNAME= blat
|
|
PORTVERSION= 34
|
|
CATEGORIES= biology
|
|
MASTER_SITES= http://www.soe.ucsc.edu/~kent/src/
|
|
DISTNAME= ${PORTNAME}Src${PORTVERSION}
|
|
|
|
MAINTAINER= ports@FreeBSD.org
|
|
COMMENT= Fast tool for local sequence similarity searches
|
|
|
|
USES= gmake
|
|
EXTRACT_SUFX= .zip
|
|
MAKEFILE= makefile
|
|
WRKSRC= ${WRKDIR}/${PORTNAME}Src
|
|
MAKE_ENV+= HOME="${WRKSRC}/${BINDIR}" MACHTYPE="${ARCH}"
|
|
|
|
SUB_FILES= pkg-message
|
|
|
|
EXECUTABLES= blat faToNib faToTwoBit gfClient gfServer nibFrag \
|
|
pslPretty pslReps pslSort twoBitInfo twoBitToFa
|
|
|
|
PLIST_FILES+= ${EXECUTABLES:S,^,bin/,}
|
|
PORTDOCS= README
|
|
PORTDATA= *
|
|
|
|
OPTIONS_DEFINE= DOCS
|
|
|
|
post-patch:
|
|
@${MKDIR} ${WRKSRC}/bin/${ARCH}
|
|
@${MKDIR} ${WRKSRC}/lib/${ARCH}
|
|
@${REINPLACE_CMD} -E 's,^(CC|CFLAGS)=,\1 ?=,g;s,-Werror,,g' \
|
|
${WRKSRC}/inc/common.mk
|
|
|
|
do-install:
|
|
.for exe in ${EXECUTABLES}
|
|
${INSTALL_PROGRAM} ${WRKSRC}/bin/${ARCH}/${exe} ${STAGEDIR}${PREFIX}/bin
|
|
.endfor
|
|
@${MKDIR} ${STAGEDIR}${DATADIR}/webBlat
|
|
${INSTALL_PROGRAM} ${WRKSRC}/webBlat/webBlat ${STAGEDIR}${DATADIR}/webBlat
|
|
${INSTALL_DATA} ${WRKSRC}/webBlat/install.txt ${STAGEDIR}${DATADIR}/webBlat
|
|
@${MKDIR} ${STAGEDIR}${DOCSDIR}
|
|
${INSTALL_DATA} ${WRKSRC}/README ${STAGEDIR}${DOCSDIR}
|
|
|
|
.include <bsd.port.mk>
|