136 lines
5.1 KiB
Text
136 lines
5.1 KiB
Text
bin/EukHighConfidenceFilter
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bin/covels-SE
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bin/coves-SE
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bin/eufindtRNA
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bin/fasta2gsi
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bin/sstofa
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bin/tRNAscan-SE
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bin/trnascan-1.4
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etc/tRNAscan-SE.conf
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%%DATADIR%%/gcode/gcode.cilnuc
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%%DATADIR%%/gcode/gcode.echdmito
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%%DATADIR%%/gcode/gcode.invmito
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%%DATADIR%%/gcode/gcode.othmito
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%%DATADIR%%/gcode/gcode.vertmito
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%%DATADIR%%/gcode/gcode.ystmito
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%%DATADIR%%/models/Cren-eury-BHB-noncan.cm
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%%DATADIR%%/models/Dsignal
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%%DATADIR%%/models/ESELC.cm
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%%DATADIR%%/models/PSELC.cm
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%%DATADIR%%/models/TPCsignal
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%%DATADIR%%/models/TRNA2-arch.cm
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%%DATADIR%%/models/TRNA2-archns.cm
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%%DATADIR%%/models/TRNA2-bact.cm
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%%DATADIR%%/models/TRNA2-bactns.cm
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%%DATADIR%%/models/TRNA2-euk.cm
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%%DATADIR%%/models/TRNA2-eukns.cm
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%%DATADIR%%/models/TRNA2.cm
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%%DATADIR%%/models/TRNA2ns.cm
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%%DATADIR%%/models/TRNAinf-1415-ns.cm
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%%DATADIR%%/models/TRNAinf-1415.cm
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%%DATADIR%%/models/TRNAinf-arch-3h.cm
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%%DATADIR%%/models/TRNAinf-arch-5h.cm
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%%DATADIR%%/models/TRNAinf-arch-SeC.cm
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%%DATADIR%%/models/TRNAinf-arch-iso
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%%DATADIR%%/models/TRNAinf-arch-iso.i1f
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%%DATADIR%%/models/TRNAinf-arch-iso.i1i
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%%DATADIR%%/models/TRNAinf-arch-iso.i1m
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%%DATADIR%%/models/TRNAinf-arch-iso.i1p
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%%DATADIR%%/models/TRNAinf-arch-ns.cm
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%%DATADIR%%/models/TRNAinf-arch.cm
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%%DATADIR%%/models/TRNAinf-bact-SeC.cm
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%%DATADIR%%/models/TRNAinf-bact-iso
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%%DATADIR%%/models/TRNAinf-bact-iso.i1f
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%%DATADIR%%/models/TRNAinf-bact-iso.i1i
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%%DATADIR%%/models/TRNAinf-bact-iso.i1m
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%%DATADIR%%/models/TRNAinf-bact-iso.i1p
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%%DATADIR%%/models/TRNAinf-bact-ns.cm
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%%DATADIR%%/models/TRNAinf-bact.cm
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%%DATADIR%%/models/TRNAinf-euk-SeC.cm
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%%DATADIR%%/models/TRNAinf-euk-iso
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%%DATADIR%%/models/TRNAinf-euk-iso.i1f
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%%DATADIR%%/models/TRNAinf-euk-iso.i1i
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%%DATADIR%%/models/TRNAinf-euk-iso.i1m
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%%DATADIR%%/models/TRNAinf-euk-iso.i1p
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%%DATADIR%%/models/TRNAinf-euk-ns.cm
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%%DATADIR%%/models/TRNAinf-euk.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal
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%%DATADIR%%/models/TRNAinf-mito-mammal-Ala.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Arg.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Asn.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Asp.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Cys.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Gln.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Glu.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Gly.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-His.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Ile.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-LeuTAA.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-LeuTAG.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Lys.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Met.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Phe.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Pro.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-SerGCT.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-SerTGA.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Thr.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Trp.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Tyr.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal-Val.cm
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%%DATADIR%%/models/TRNAinf-mito-mammal.i1f
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%%DATADIR%%/models/TRNAinf-mito-mammal.i1i
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%%DATADIR%%/models/TRNAinf-mito-mammal.i1m
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%%DATADIR%%/models/TRNAinf-mito-mammal.i1p
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%%DATADIR%%/models/TRNAinf-mito-vert
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%%DATADIR%%/models/TRNAinf-mito-vert-Ala.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Arg.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Asn.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Asp.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Cys.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Gln.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Glu.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Gly.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-His.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Ile.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-LeuTAA.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-LeuTAG.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Lys.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Met.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Phe.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Pro.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-SerGCT.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-SerTGA.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Thr.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Trp.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Tyr.cm
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%%DATADIR%%/models/TRNAinf-mito-vert-Val.cm
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%%DATADIR%%/models/TRNAinf-mito-vert.i1f
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%%DATADIR%%/models/TRNAinf-mito-vert.i1i
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%%DATADIR%%/models/TRNAinf-mito-vert.i1m
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%%DATADIR%%/models/TRNAinf-mito-vert.i1p
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%%DATADIR%%/models/TRNAinf-ns.cm
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%%DATADIR%%/models/TRNAinf.cm
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%%DATADIR%%/models/Thaum-BHB-noncan.cm
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%%DATADIR%%/tRNAscanSE/ArrayCMscanResults.pm
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%%DATADIR%%/tRNAscanSE/ArraytRNA.pm
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%%DATADIR%%/tRNAscanSE/CM.pm
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%%DATADIR%%/tRNAscanSE/CMscanResultFile.pm
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%%DATADIR%%/tRNAscanSE/Configuration.pm
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%%DATADIR%%/tRNAscanSE/Eufind.pm
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%%DATADIR%%/tRNAscanSE/FpScanResultFile.pm
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%%DATADIR%%/tRNAscanSE/GeneticCode.pm
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%%DATADIR%%/tRNAscanSE/IntResultFile.pm
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%%DATADIR%%/tRNAscanSE/LogFile.pm
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%%DATADIR%%/tRNAscanSE/MultiResultFile.pm
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%%DATADIR%%/tRNAscanSE/Options.pm
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%%DATADIR%%/tRNAscanSE/ResultFileReader.pm
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%%DATADIR%%/tRNAscanSE/SS.pm
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%%DATADIR%%/tRNAscanSE/ScanResult.pm
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%%DATADIR%%/tRNAscanSE/Sequence.pm
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%%DATADIR%%/tRNAscanSE/SprinzlAlign.pm
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%%DATADIR%%/tRNAscanSE/SprinzlAlignResults.pm
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%%DATADIR%%/tRNAscanSE/SprinzlPos.pm
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%%DATADIR%%/tRNAscanSE/Stats.pm
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%%DATADIR%%/tRNAscanSE/Tscan.pm
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%%DATADIR%%/tRNAscanSE/Utils.pm
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%%DATADIR%%/tRNAscanSE/tRNA.pm
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