44 lines
1.2 KiB
Makefile
44 lines
1.2 KiB
Makefile
# Created by: chuynh@biolateral.com.au
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# $FreeBSD$
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PORTNAME= tRNAscan-SE
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PORTVERSION= 1.23
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PORTREVISION= 1
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CATEGORIES= biology
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MASTER_SITES= ftp://selab.janelia.org/pub/software/tRNAscan-SE/
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EXTRACT_SUFX= .tar.Z
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MAINTAINER= ports@FreeBSD.org
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COMMENT= Improved tool for transfer RNA detection
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USES= perl5
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MAKE_ARGS= BINDIR="${PREFIX}/bin" \
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LIBDIR="${DATADIR}" \
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CC="${CC}" \
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CFLAGS="${CFLAGS}"
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PLIST_FILES+= bin/covels-SE bin/coves-SE bin/eufindtRNA bin/tRNAscan-SE bin/trnascan-1.4 \
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man/man1/tRNAscan-SE.1.gz
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PORTDATA= *
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PORTDOCS= Manual.ps
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OPTIONS_DEFINE= DOCS
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post-patch:
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@${REINPLACE_CMD} -e 's|tRNAscanSE setpaths|tRNAscanSE|g ; \
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s|if tRNAscan-SE|if ./tRNAscan-SE|g' ${WRKSRC}/Makefile
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do-install:
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.for f in covels-SE coves-SE eufindtRNA trnascan-1.4
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${INSTALL_PROGRAM} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/bin
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.endfor
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${INSTALL_SCRIPT} ${WRKSRC}/tRNAscan-SE ${STAGEDIR}${PREFIX}/bin
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${INSTALL_MAN} ${WRKSRC}/tRNAscan-SE.man ${STAGEDIR}${MANPREFIX}/man/man1/tRNAscan-SE.1
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@${MKDIR} ${STAGEDIR}${DATADIR}
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.for f in TPCsignal Dsignal *.cm gcode.*
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${INSTALL_DATA} ${WRKSRC}/${f} ${STAGEDIR}${DATADIR}
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.endfor
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@${MKDIR} ${STAGEDIR}${DOCSDIR}
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${INSTALL_DATA} ${WRKSRC}/Manual.ps ${STAGEDIR}${DOCSDIR}
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.include <bsd.port.mk>
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