565d0310d5
Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a tree conditioned on the observations. The conditioning is accomplished using Bayes's theorem. The posterior probability distribution of trees is impossible to calculate analytically; instead, MrBayes uses a simulation technique called Markov chain Monte Carlo (or MCMC) to approximate the posterior probabilities of trees. WWW: http://mrbayes.csit.fsu.edu/ PR: ports/118542 Submitted by: mzaki at biol.s.u-tokyo.ac.jp
86 lines
1.8 KiB
Makefile
86 lines
1.8 KiB
Makefile
# $FreeBSD$
|
|
#
|
|
|
|
COMMENT = Biology
|
|
|
|
SUBDIR += L-Breeder
|
|
SUBDIR += adun
|
|
SUBDIR += ariadne
|
|
SUBDIR += artemis
|
|
SUBDIR += avida
|
|
SUBDIR += babel
|
|
SUBDIR += belvu
|
|
SUBDIR += biococoa
|
|
SUBDIR += biojava
|
|
SUBDIR += blast
|
|
SUBDIR += blat
|
|
SUBDIR += boinc-simap
|
|
SUBDIR += chemeq
|
|
SUBDIR += clustalw
|
|
SUBDIR += crimap
|
|
SUBDIR += distribfold
|
|
SUBDIR += dna-qc
|
|
SUBDIR += dotter
|
|
SUBDIR += embassy
|
|
SUBDIR += emboss
|
|
SUBDIR += fasta
|
|
SUBDIR += fasta3
|
|
SUBDIR += fastdnaml
|
|
SUBDIR += finchtv
|
|
SUBDIR += fluctuate
|
|
SUBDIR += garlic
|
|
SUBDIR += genpak
|
|
SUBDIR += gff2ps
|
|
SUBDIR += gmap
|
|
SUBDIR += gperiodic
|
|
SUBDIR += grappa
|
|
SUBDIR += hmmer
|
|
SUBDIR += jalview
|
|
SUBDIR += kinemage
|
|
SUBDIR += lagan
|
|
SUBDIR += lamarc
|
|
SUBDIR += libgenome
|
|
SUBDIR += linux-foldingathome
|
|
SUBDIR += lsysexp
|
|
SUBDIR += mafft
|
|
SUBDIR += migrate
|
|
SUBDIR += molden
|
|
SUBDIR += mopac
|
|
SUBDIR += mrbayes
|
|
SUBDIR += mummer
|
|
SUBDIR += nab
|
|
SUBDIR += ncbi-toolkit
|
|
SUBDIR += ortep3
|
|
SUBDIR += p5-AcePerl
|
|
SUBDIR += p5-Bio-ASN1-EntrezGene
|
|
SUBDIR += p5-Bio-Das
|
|
SUBDIR += p5-Bio-Phylo
|
|
SUBDIR += p5-bioperl
|
|
SUBDIR += p5-bioperl-devel
|
|
SUBDIR += p5-bioperl-run
|
|
SUBDIR += p5-bioperl-run-devel
|
|
SUBDIR += paml
|
|
SUBDIR += phylip
|
|
SUBDIR += platon
|
|
SUBDIR += povchem
|
|
SUBDIR += primer3
|
|
SUBDIR += protomol
|
|
SUBDIR += psi88
|
|
SUBDIR += py-biopython
|
|
SUBDIR += pymol
|
|
SUBDIR += rasmol
|
|
SUBDIR += recombine
|
|
SUBDIR += ruby-bio
|
|
SUBDIR += seaview
|
|
SUBDIR += seqio
|
|
SUBDIR += sim4
|
|
SUBDIR += tRNAscan-SE
|
|
SUBDIR += t_coffee
|
|
SUBDIR += tinker
|
|
SUBDIR += treepuzzle
|
|
SUBDIR += treeviewx
|
|
SUBDIR += wise
|
|
SUBDIR += xdrawchem
|
|
SUBDIR += xmolwt
|
|
|
|
.include <bsd.port.subdir.mk>
|