428 lines
16 KiB
Text
428 lines
16 KiB
Text
bin/alchemy
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bin/analyze
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bin/anneal
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bin/archive
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bin/correlate
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bin/crystal
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bin/diffuse
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bin/distgeom
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bin/document
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bin/dynamic
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bin/gda
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bin/intedit
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bin/intxyz
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bin/minimize
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bin/minirot
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bin/minrigid
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bin/monte
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bin/newton
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bin/newtrot
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bin/nucleic
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bin/optimize
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bin/optirot
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bin/optrigid
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bin/path
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bin/pdbxyz
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bin/polarize
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bin/protein
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bin/pss
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bin/pssrigid
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bin/pssrot
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bin/radial
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bin/saddle
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bin/scan
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bin/sniffer
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bin/spacefill
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bin/spectrum
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bin/superpose
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bin/sybylxyz
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bin/testgrad
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bin/testhess
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bin/testlight
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bin/testrot
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bin/timer
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bin/timerot
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bin/vibrate
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bin/vibrot
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bin/xtalfit
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bin/xtalmin
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bin/xyzedit
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bin/xyzint
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bin/xyzpdb
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bin/xyzsybyl
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%%PORTDOCS%%share/doc/tinker/README
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%%PORTDOCS%%share/doc/tinker/guide.pdf
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%%PORTDOCS%%share/doc/tinker/guide.ps.gz
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%%PORTDOCS%%share/doc/tinker/guide.txt
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%%PORTDOCS%%share/doc/tinker/license.pdf
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%%PORTDOCS%%share/doc/tinker/license.ps
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%%PORTDOCS%%share/doc/tinker/license.txt
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%%PORTDOCS%%share/doc/tinker/logo.pdf
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%%PORTDOCS%%share/doc/tinker/logo.ps.gz
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%%PORTDOCS%%share/doc/tinker/release-3.2
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%%PORTDOCS%%share/doc/tinker/release-3.6
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%%PORTDOCS%%share/doc/tinker/release-3.7
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%%PORTDOCS%%share/doc/tinker/release-3.8
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%%PORTDOCS%%share/doc/tinker/release-3.9
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%%PORTDOCS%%share/doc/tinker/summary.pdf
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%%PORTDOCS%%share/doc/tinker/summary.ps
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%%PORTDOCS%%share/doc/tinker/summary.txt
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%%PORTDOCS%%share/examples/tinker/README
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%%PORTDOCS%%share/examples/tinker/anion.dat
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%%PORTDOCS%%share/examples/tinker/anion.dyn0
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%%PORTDOCS%%share/examples/tinker/anion.key
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%%PORTDOCS%%share/examples/tinker/anion.log
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%%PORTDOCS%%share/examples/tinker/anion.run
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%%PORTDOCS%%share/examples/tinker/anion.xyz
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%%PORTDOCS%%share/examples/tinker/argon.1st
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%%PORTDOCS%%share/examples/tinker/argon.key
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%%PORTDOCS%%share/examples/tinker/argon.log
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%%PORTDOCS%%share/examples/tinker/argon.run
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%%PORTDOCS%%share/examples/tinker/clean.make
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%%PORTDOCS%%share/examples/tinker/cluster.dat
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%%PORTDOCS%%share/examples/tinker/cluster.key
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%%PORTDOCS%%share/examples/tinker/cluster.log
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%%PORTDOCS%%share/examples/tinker/cluster.run
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%%PORTDOCS%%share/examples/tinker/cluster.xyz
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%%PORTDOCS%%share/examples/tinker/crambin.key
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%%PORTDOCS%%share/examples/tinker/crambin.log
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%%PORTDOCS%%share/examples/tinker/crambin.pdb
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%%PORTDOCS%%share/examples/tinker/crambin.run
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%%PORTDOCS%%share/examples/tinker/cyclohex.boat
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%%PORTDOCS%%share/examples/tinker/cyclohex.chair
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%%PORTDOCS%%share/examples/tinker/cyclohex.key
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%%PORTDOCS%%share/examples/tinker/cyclohex.log
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%%PORTDOCS%%share/examples/tinker/cyclohex.run
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%%PORTDOCS%%share/examples/tinker/enkephalin.dat
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%%PORTDOCS%%share/examples/tinker/enkephalin.key
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%%PORTDOCS%%share/examples/tinker/enkephalin.log
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%%PORTDOCS%%share/examples/tinker/enkephalin.run
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%%PORTDOCS%%share/examples/tinker/formamide.cell
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%%PORTDOCS%%share/examples/tinker/formamide.dat
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%%PORTDOCS%%share/examples/tinker/formamide.key
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%%PORTDOCS%%share/examples/tinker/formamide.log
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%%PORTDOCS%%share/examples/tinker/formamide.run
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%%PORTDOCS%%share/examples/tinker/helix.1st
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%%PORTDOCS%%share/examples/tinker/helix.key
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%%PORTDOCS%%share/examples/tinker/helix.log
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%%PORTDOCS%%share/examples/tinker/helix.run
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%%PORTDOCS%%share/examples/tinker/salt.cell
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%%PORTDOCS%%share/examples/tinker/salt.key
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%%PORTDOCS%%share/examples/tinker/salt.log
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%%PORTDOCS%%share/examples/tinker/salt.run
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%%PORTDOCS%%share/tinker/bench/README
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%%PORTDOCS%%share/tinker/bench/bench1.key
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%%PORTDOCS%%share/tinker/bench/bench1.run
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%%PORTDOCS%%share/tinker/bench/bench1.xyz
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%%PORTDOCS%%share/tinker/bench/bench2.key
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%%PORTDOCS%%share/tinker/bench/bench2.run
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%%PORTDOCS%%share/tinker/bench/bench2.xyz
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%%PORTDOCS%%share/tinker/bench/bench3.key
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%%PORTDOCS%%share/tinker/bench/bench3.run
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%%PORTDOCS%%share/tinker/bench/bench3.xyz
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%%PORTDOCS%%share/tinker/bench/bench4.dyn0
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%%PORTDOCS%%share/tinker/bench/bench4.key
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%%PORTDOCS%%share/tinker/bench/bench4.log
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%%PORTDOCS%%share/tinker/bench/bench4.run
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%%PORTDOCS%%share/tinker/bench/bench4.xyz
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%%PORTDOCS%%share/tinker/bench/bench5.dyn0
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%%PORTDOCS%%share/tinker/bench/bench5.key
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%%PORTDOCS%%share/tinker/bench/bench5.log
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%%PORTDOCS%%share/tinker/bench/bench5.run
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%%PORTDOCS%%share/tinker/bench/bench5.xyz
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%%PORTDOCS%%share/tinker/bench/results-2.3
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%%PORTDOCS%%share/tinker/bench/results-2.4
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%%PORTDOCS%%share/tinker/bench/results-2.9
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%%PORTDOCS%%share/tinker/bench/results-3.1
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%%PORTDOCS%%share/tinker/bench/results-3.2
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%%PORTDOCS%%share/tinker/bench/results-3.4
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%%PORTDOCS%%share/tinker/bench/results-3.5
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%%PORTDOCS%%share/tinker/bench/results-3.7
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%%PORTDOCS%%share/tinker/bench/results-3.8
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%%PORTDOCS%%share/tinker/bench/results-3.9
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share/tinker/params/README
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share/tinker/params/amber.prm
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share/tinker/params/charmm.prm
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share/tinker/params/hoch.prm
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share/tinker/params/mm2.prm
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share/tinker/params/mm3.prm
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share/tinker/params/mm3pro.prm
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share/tinker/params/opls.prm
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share/tinker/params/oplsaa.prm
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share/tinker/params/smooth.prm
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share/tinker/params/smoothaa.prm
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share/tinker/params/water.prm
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%%PORTDOCS%%share/tinker/test/README
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%%PORTDOCS%%share/tinker/test/ala20.key
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%%PORTDOCS%%share/tinker/test/ala20.xyz
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%%PORTDOCS%%share/tinker/test/alkane.key
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%%PORTDOCS%%share/tinker/test/alkane.xyz
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%%PORTDOCS%%share/tinker/test/arach.int
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%%PORTDOCS%%share/tinker/test/arach.key
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%%PORTDOCS%%share/tinker/test/arach.xyz
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%%PORTDOCS%%share/tinker/test/azulene.int
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%%PORTDOCS%%share/tinker/test/azulene.key
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%%PORTDOCS%%share/tinker/test/azulene.xyz
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%%PORTDOCS%%share/tinker/test/bdna.int
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%%PORTDOCS%%share/tinker/test/bdna.key
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%%PORTDOCS%%share/tinker/test/bdna.make
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%%PORTDOCS%%share/tinker/test/bdna.seq
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%%PORTDOCS%%share/tinker/test/bdna.xyz
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%%PORTDOCS%%share/tinker/test/bearing.key
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%%PORTDOCS%%share/tinker/test/bearing.xyz
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%%PORTDOCS%%share/tinker/test/bearing2.key
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%%PORTDOCS%%share/tinker/test/bearing2.xyz
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%%PORTDOCS%%share/tinker/test/benzene.int
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%%PORTDOCS%%share/tinker/test/benzene.key
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%%PORTDOCS%%share/tinker/test/benzene.xyz
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%%PORTDOCS%%share/tinker/test/bowl.int
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%%PORTDOCS%%share/tinker/test/bowl.key
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%%PORTDOCS%%share/tinker/test/bowl.xyz
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%%PORTDOCS%%share/tinker/test/bowl2.key
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%%PORTDOCS%%share/tinker/test/bowl2.xyz
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%%PORTDOCS%%share/tinker/test/bowl3.key
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%%PORTDOCS%%share/tinker/test/bowl3.xyz
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%%PORTDOCS%%share/tinker/test/bucky.int
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%%PORTDOCS%%share/tinker/test/bucky.key
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%%PORTDOCS%%share/tinker/test/bucky.xyz
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%%PORTDOCS%%share/tinker/test/butane.int
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%%PORTDOCS%%share/tinker/test/butane.key
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%%PORTDOCS%%share/tinker/test/butane.xyz
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%%PORTDOCS%%share/tinker/test/butane2.int
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%%PORTDOCS%%share/tinker/test/butane2.key
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%%PORTDOCS%%share/tinker/test/butane2.xyz
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%%PORTDOCS%%share/tinker/test/butanes.dyn
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%%PORTDOCS%%share/tinker/test/butanes.key
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%%PORTDOCS%%share/tinker/test/butanes.xyz
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%%PORTDOCS%%share/tinker/test/butanex.key
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%%PORTDOCS%%share/tinker/test/butanex.xyz
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%%PORTDOCS%%share/tinker/test/butopls.int
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%%PORTDOCS%%share/tinker/test/butopls.key
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%%PORTDOCS%%share/tinker/test/butopls.xyz
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%%PORTDOCS%%share/tinker/test/butopls2.int
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%%PORTDOCS%%share/tinker/test/butopls2.key
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%%PORTDOCS%%share/tinker/test/butopls2.xyz
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%%PORTDOCS%%share/tinker/test/c5.key
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%%PORTDOCS%%share/tinker/test/c5.seq
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%%PORTDOCS%%share/tinker/test/c5.xyz
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%%PORTDOCS%%share/tinker/test/c7a.key
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%%PORTDOCS%%share/tinker/test/c7a.seq
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%%PORTDOCS%%share/tinker/test/c7a.xyz
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%%PORTDOCS%%share/tinker/test/c7e.key
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%%PORTDOCS%%share/tinker/test/c7e.seq
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%%PORTDOCS%%share/tinker/test/c7e.xyz
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%%PORTDOCS%%share/tinker/test/calmodulin.key
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%%PORTDOCS%%share/tinker/test/calmodulin.pdb
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%%PORTDOCS%%share/tinker/test/calmodulin.seq
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%%PORTDOCS%%share/tinker/test/calmodulin.xyz
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%%PORTDOCS%%share/tinker/test/copper.key
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%%PORTDOCS%%share/tinker/test/copper.xyz
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%%PORTDOCS%%share/tinker/test/cpentene.key
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%%PORTDOCS%%share/tinker/test/cpentene.xyz
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%%PORTDOCS%%share/tinker/test/crambin.key
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%%PORTDOCS%%share/tinker/test/crambin.pdb
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%%PORTDOCS%%share/tinker/test/crambin.seq
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%%PORTDOCS%%share/tinker/test/crambin.super
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%%PORTDOCS%%share/tinker/test/crambin.xyz
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%%PORTDOCS%%share/tinker/test/crambinx.key
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%%PORTDOCS%%share/tinker/test/crambinx.ray
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%%PORTDOCS%%share/tinker/test/crambinx.xyz
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%%PORTDOCS%%share/tinker/test/crown.int
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%%PORTDOCS%%share/tinker/test/crown.key
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%%PORTDOCS%%share/tinker/test/crown.xyz
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%%PORTDOCS%%share/tinker/test/cychept.int
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%%PORTDOCS%%share/tinker/test/cychept.key
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%%PORTDOCS%%share/tinker/test/cychept.xyz
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%%PORTDOCS%%share/tinker/test/cyclo.int
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%%PORTDOCS%%share/tinker/test/cyclo.key
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%%PORTDOCS%%share/tinker/test/cyclo.xyz
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%%PORTDOCS%%share/tinker/test/cyclo2.int
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%%PORTDOCS%%share/tinker/test/cyclo2.key
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%%PORTDOCS%%share/tinker/test/cyclo2.xyz
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%%PORTDOCS%%share/tinker/test/dang.key
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%%PORTDOCS%%share/tinker/test/dang.xyz
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%%PORTDOCS%%share/tinker/test/diamond.key
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%%PORTDOCS%%share/tinker/test/diamond.xyz
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%%PORTDOCS%%share/tinker/test/diene.int
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%%PORTDOCS%%share/tinker/test/diene.key
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%%PORTDOCS%%share/tinker/test/diene.xyz
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%%PORTDOCS%%share/tinker/test/dimethane.key
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%%PORTDOCS%%share/tinker/test/dimethane.xyz
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%%PORTDOCS%%share/tinker/test/diwater.key
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%%PORTDOCS%%share/tinker/test/diwater.lin
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%%PORTDOCS%%share/tinker/test/diwater.xyz
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%%PORTDOCS%%share/tinker/test/enkephalin.int
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%%PORTDOCS%%share/tinker/test/enkephalin.key
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%%PORTDOCS%%share/tinker/test/enkephalin.make
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%%PORTDOCS%%share/tinker/test/enkephalin.seq
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%%PORTDOCS%%share/tinker/test/enkephalin.xyz
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%%PORTDOCS%%share/tinker/test/ermer.int
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%%PORTDOCS%%share/tinker/test/ermer.key
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%%PORTDOCS%%share/tinker/test/ermer.xyz
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%%PORTDOCS%%share/tinker/test/ester.key
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%%PORTDOCS%%share/tinker/test/ester.xyz
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%%PORTDOCS%%share/tinker/test/ethane.int
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%%PORTDOCS%%share/tinker/test/ethane.key
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%%PORTDOCS%%share/tinker/test/ethane.xyz
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%%PORTDOCS%%share/tinker/test/ethanol.int
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%%PORTDOCS%%share/tinker/test/ethanol.key
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%%PORTDOCS%%share/tinker/test/ethanol.xyz
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%%PORTDOCS%%share/tinker/test/ethylene.int
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%%PORTDOCS%%share/tinker/test/ethylene.key
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%%PORTDOCS%%share/tinker/test/ethylene.xyz
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%%PORTDOCS%%share/tinker/test/flane.int
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%%PORTDOCS%%share/tinker/test/flane.key
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%%PORTDOCS%%share/tinker/test/flane.xyz
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%%PORTDOCS%%share/tinker/test/form.key
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%%PORTDOCS%%share/tinker/test/form.xyz
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%%PORTDOCS%%share/tinker/test/formbig.key
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%%PORTDOCS%%share/tinker/test/formbig.xyz
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%%PORTDOCS%%share/tinker/test/formbox.dyn
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%%PORTDOCS%%share/tinker/test/formbox.key
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%%PORTDOCS%%share/tinker/test/formbox.xyz
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%%PORTDOCS%%share/tinker/test/furan.int
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%%PORTDOCS%%share/tinker/test/furan.key
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%%PORTDOCS%%share/tinker/test/furan.xyz
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%%PORTDOCS%%share/tinker/test/glucose.key
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%%PORTDOCS%%share/tinker/test/glucose.xyz
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%%PORTDOCS%%share/tinker/test/graphite.key
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%%PORTDOCS%%share/tinker/test/graphite.xyz
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%%PORTDOCS%%share/tinker/test/helix.dyn
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%%PORTDOCS%%share/tinker/test/helix.key
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%%PORTDOCS%%share/tinker/test/helix.xyz
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%%PORTDOCS%%share/tinker/test/heme.key
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%%PORTDOCS%%share/tinker/test/heme.xyz
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%%PORTDOCS%%share/tinker/test/hexane.int
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%%PORTDOCS%%share/tinker/test/hexane.key
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%%PORTDOCS%%share/tinker/test/hexane.xyz
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%%PORTDOCS%%share/tinker/test/hexanes.dyn
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%%PORTDOCS%%share/tinker/test/hexanes.key
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%%PORTDOCS%%share/tinker/test/hexanes.run
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%%PORTDOCS%%share/tinker/test/hexanes.xyz
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%%PORTDOCS%%share/tinker/test/hexanex.xyz
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%%PORTDOCS%%share/tinker/test/imidazole.int
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%%PORTDOCS%%share/tinker/test/imidazole.key
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%%PORTDOCS%%share/tinker/test/imidazole.xyz
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%%PORTDOCS%%share/tinker/test/imine.int
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%%PORTDOCS%%share/tinker/test/imine.key
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%%PORTDOCS%%share/tinker/test/imine.xyz
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%%PORTDOCS%%share/tinker/test/lactam.key
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%%PORTDOCS%%share/tinker/test/lactam.xyz
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%%PORTDOCS%%share/tinker/test/lipid.key
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%%PORTDOCS%%share/tinker/test/lipid.xyz
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%%PORTDOCS%%share/tinker/test/melittin.key
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%%PORTDOCS%%share/tinker/test/melittin.pdb
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%%PORTDOCS%%share/tinker/test/melittin.seq
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%%PORTDOCS%%share/tinker/test/melittin.xyz
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%%PORTDOCS%%share/tinker/test/membrane.key
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%%PORTDOCS%%share/tinker/test/membrane.xyz
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%%PORTDOCS%%share/tinker/test/methane.int
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%%PORTDOCS%%share/tinker/test/methane.key
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%%PORTDOCS%%share/tinker/test/methane.xyz
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%%PORTDOCS%%share/tinker/test/methanol.key
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%%PORTDOCS%%share/tinker/test/methanol.xyz
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%%PORTDOCS%%share/tinker/test/nacl.key
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%%PORTDOCS%%share/tinker/test/nacl.xyz
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%%PORTDOCS%%share/tinker/test/naphthalene.int
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%%PORTDOCS%%share/tinker/test/naphthalene.key
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%%PORTDOCS%%share/tinker/test/naphthalene.xyz
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%%PORTDOCS%%share/tinker/test/nitrogen.dyn
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%%PORTDOCS%%share/tinker/test/nitrogen.key
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%%PORTDOCS%%share/tinker/test/nitrogen.xyz
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%%PORTDOCS%%share/tinker/test/nma.int
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%%PORTDOCS%%share/tinker/test/nma.key
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%%PORTDOCS%%share/tinker/test/nma.xyz
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%%PORTDOCS%%share/tinker/test/nmabox.dyn
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%%PORTDOCS%%share/tinker/test/nmabox.key
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%%PORTDOCS%%share/tinker/test/nmabox.xyz
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%%PORTDOCS%%share/tinker/test/nstilbene.int
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%%PORTDOCS%%share/tinker/test/nstilbene.key
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%%PORTDOCS%%share/tinker/test/nstilbene.xyz
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%%PORTDOCS%%share/tinker/test/octane.int
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%%PORTDOCS%%share/tinker/test/octane.key
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%%PORTDOCS%%share/tinker/test/octane.xyz
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%%PORTDOCS%%share/tinker/test/octane2.int
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%%PORTDOCS%%share/tinker/test/octane2.key
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%%PORTDOCS%%share/tinker/test/octane2.xyz
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%%PORTDOCS%%share/tinker/test/octene.key
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%%PORTDOCS%%share/tinker/test/octene.xyz
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%%PORTDOCS%%share/tinker/test/palmitate.int
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%%PORTDOCS%%share/tinker/test/palmitate.key
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%%PORTDOCS%%share/tinker/test/palmitate.xyz
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%%PORTDOCS%%share/tinker/test/peptide.int
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%%PORTDOCS%%share/tinker/test/peptide.key
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%%PORTDOCS%%share/tinker/test/peptide.make
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%%PORTDOCS%%share/tinker/test/peptide.pdb
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%%PORTDOCS%%share/tinker/test/peptide.seq
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%%PORTDOCS%%share/tinker/test/peptide.xyz
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%%PORTDOCS%%share/tinker/test/phenanth.key
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%%PORTDOCS%%share/tinker/test/phenanth.xyz
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%%PORTDOCS%%share/tinker/test/pol3.key
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%%PORTDOCS%%share/tinker/test/pol3.xyz
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%%PORTDOCS%%share/tinker/test/propane.key
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%%PORTDOCS%%share/tinker/test/propane.ray
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%%PORTDOCS%%share/tinker/test/propane.xyz
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%%PORTDOCS%%share/tinker/test/propellane.int
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%%PORTDOCS%%share/tinker/test/propellane.key
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%%PORTDOCS%%share/tinker/test/propellane.xyz
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%%PORTDOCS%%share/tinker/test/propyne.key
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%%PORTDOCS%%share/tinker/test/propyne.xyz
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%%PORTDOCS%%share/tinker/test/pyridine.int
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%%PORTDOCS%%share/tinker/test/pyridine.key
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%%PORTDOCS%%share/tinker/test/pyridine.xyz
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%%PORTDOCS%%share/tinker/test/pyrrole.int
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%%PORTDOCS%%share/tinker/test/pyrrole.key
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%%PORTDOCS%%share/tinker/test/pyrrole.xyz
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%%PORTDOCS%%share/tinker/test/retinoic.key
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%%PORTDOCS%%share/tinker/test/retinoic.xyz
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%%PORTDOCS%%share/tinker/test/skunk.key
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%%PORTDOCS%%share/tinker/test/skunk.xyz
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%%PORTDOCS%%share/tinker/test/sterol.key
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%%PORTDOCS%%share/tinker/test/sterol.xyz
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%%PORTDOCS%%share/tinker/test/styrene.int
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%%PORTDOCS%%share/tinker/test/styrene.key
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%%PORTDOCS%%share/tinker/test/styrene.xyz
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%%PORTDOCS%%share/tinker/test/thiadiene.int
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%%PORTDOCS%%share/tinker/test/thiadiene.key
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%%PORTDOCS%%share/tinker/test/thiadiene.xyz
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%%PORTDOCS%%share/tinker/test/thiophene.int
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%%PORTDOCS%%share/tinker/test/thiophene.key
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%%PORTDOCS%%share/tinker/test/thiophene.xyz
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%%PORTDOCS%%share/tinker/test/thr.int
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%%PORTDOCS%%share/tinker/test/thr.key
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%%PORTDOCS%%share/tinker/test/thr.xyz
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%%PORTDOCS%%share/tinker/test/tip3p.key
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%%PORTDOCS%%share/tinker/test/tip3p.xyz
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%%PORTDOCS%%share/tinker/test/tip4p.key
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%%PORTDOCS%%share/tinker/test/tip4p.xyz
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%%PORTDOCS%%share/tinker/test/tip5p.key
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%%PORTDOCS%%share/tinker/test/tip5p.xyz
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%%PORTDOCS%%share/tinker/test/water.int
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%%PORTDOCS%%share/tinker/test/water.key
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%%PORTDOCS%%share/tinker/test/water.xyz
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%%PORTDOCS%%share/tinker/test/waterbig.key
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%%PORTDOCS%%share/tinker/test/waterbig.xyz
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%%PORTDOCS%%share/tinker/test/waterbox.dyn
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%%PORTDOCS%%share/tinker/test/waterbox.key
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%%PORTDOCS%%share/tinker/test/waterbox.xyz
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%%PORTDOCS%%share/tinker/test/waterhuge.key
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%%PORTDOCS%%share/tinker/test/waterhuge.xyz
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%%PORTDOCS%%share/tinker/test/wateroct.dyn
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%%PORTDOCS%%share/tinker/test/wateroct.key
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%%PORTDOCS%%share/tinker/test/wateroct.xyz
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%%PORTDOCS%%share/tinker/test/watersmall.dyn
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%%PORTDOCS%%share/tinker/test/watersmall.key
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%%PORTDOCS%%share/tinker/test/watersmall.xyz
|
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%%PORTDOCS%%share/tinker/test/watertiny.dyn
|
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%%PORTDOCS%%share/tinker/test/watertiny.key
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|
%%PORTDOCS%%share/tinker/test/watertiny.xyz
|
|
%%PORTDOCS%%share/tinker/test/white.int
|
|
%%PORTDOCS%%share/tinker/test/white.key
|
|
%%PORTDOCS%%share/tinker/test/white.xyz
|
|
share/tinker/tinker.txt
|
|
%%PORTDOCS%%@dirrm share/doc/tinker
|
|
%%PORTDOCS%%@dirrm share/examples/tinker
|
|
%%PORTDOCS%%@dirrm share/tinker/bench
|
|
@dirrm share/tinker/params
|
|
%%PORTDOCS%%@dirrm share/tinker/test
|
|
@dirrm share/tinker
|