freebsd-ports/science
Steve Wills cae009169c h5utils is a set of utilities for visualization and conversion of
scientific data in the free, portable HDF5 format.

Besides providing a simple tool for batch visualization as PNG images,
h5utils also includes programs to convert HDF5 datasets into the formats
required by other free visualization software (e.g. plain text, Vis5d,
and VTK).

WWW: http://ab-initio.mit.edu/wiki/index.php/H5utils

PR:		ports/155482
Submitted by:	Klaus Aehlig <aehlig at linta.de>
2011-03-18 19:42:35 +00:00
..
2d-rewriter - Update to 1.4 2010-01-12 03:02:16 +00:00
2dhf - Change sed delimiters away from , 2009-10-04 20:26:01 +00:00
abinit Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
afni Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
at
avogadro - Update to 1.0.1 2010-07-16 01:29:59 +00:00
bblimage
bddsolve Bddsolve is a BDD-based tool for solving satisfiability and reachability 2010-05-12 13:25:37 +00:00
bft Make fetchable again. 2010-09-29 19:33:17 +00:00
bodr - Update to 9 2010-07-31 22:13:27 +00:00
brian - Update to 1.3.0 2011-02-21 00:25:05 +00:00
buddy Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
cdcl - update to 1.4.1 2010-03-28 06:47:48 +00:00
cdf - Update to 3.3.0 2010-01-21 21:14:54 +00:00
cdo - Update to 1.4.7 2011-03-01 02:44:32 +00:00
cgnslib - Upgrade to 2.5-5. 2011-02-26 10:23:14 +00:00
checkmol - Welcome to fpc 2.4.2 2010-11-15 22:50:44 +00:00
chemical-mime-data - update to 1.4.1 2010-03-28 06:47:48 +00:00
chemtool - update to 1.4.1 2010-03-28 06:47:48 +00:00
chemtool-devel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
clhep - Update to 2.1.0.1 2010-11-13 11:13:13 +00:00
colt - Fix fetch error 2011-01-16 01:37:19 +00:00
crf++ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
dcl
devisor
dtiquery - Chase math/vtk5 update 2010-04-03 15:36:30 +00:00
ecs Chase the upgrade of science/cgnslib to 2.5-5; this implies to 2011-02-26 10:23:19 +00:00
elmer-eio - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmer-fem - Mark ports that have been broken for six month or more, or never compiled on 2011-03-17 11:08:44 +00:00
elmer-hutiter - Fixed fetch of port 2011-02-28 13:46:36 +00:00
elmer-matc - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmer-meshgen2d - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmergrid - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmerpost - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
epte Update my MAINTAINER address to culot@FreeBSD.org. 2010-10-20 05:53:20 +00:00
euler - update to 1.4.1 2010-03-28 06:47:48 +00:00
fastcap Deprecate unmaintained ports from science where upstream disapear and/or 2011-03-13 21:47:45 +00:00
fasthenry Deprecate unmaintained ports from science where upstream disapear and/or 2011-03-13 21:47:45 +00:00
felt
flounder - update to 1.4.1 2010-03-28 06:47:48 +00:00
fvm Fix the previous commit. 2011-03-01 17:59:32 +00:00
g3data Drop maintainership for ports I can't maintain anymore. 2010-10-25 20:09:06 +00:00
gamess NO_CDROM is redundant when RESTRICTED is set. 2011-01-24 03:54:45 +00:00
gave - update to 1.4.1 2010-03-28 06:47:48 +00:00
gchemutils Update to 0.12.6. 2011-02-28 12:14:36 +00:00
gdis - update to 1.4.1 2010-03-28 06:47:48 +00:00
gerris Presenting GNOME 2.30.1 for FreeBSD. The offical release notes for this 2010-05-10 21:19:08 +00:00
getdp - Bump PORTREVISION to chase the update of math/gsl 2010-03-29 01:12:27 +00:00
ghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
ghmm Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gnudatalanguage - Chase math/plplot shlib bump 2011-03-04 15:28:53 +00:00
gramps - Fix plist and unbreak - do not overwrite file installed by shared-mime-info 2010-12-09 14:43:26 +00:00
gromacs - change MAINTAINER to my @FreeBSD.org address 2010-12-27 22:02:09 +00:00
gsmc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gsystem - update to 1.4.1 2010-03-28 06:47:48 +00:00
gtamsanalyzer LICENSE GPLv2 2010-06-05 19:53:32 +00:00
gwyddion Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
h5utils h5utils is a set of utilities for visualization and conversion of 2011-03-18 19:42:35 +00:00
harminv Harminv is a free program (and accompanying library) to solve the problem 2010-01-02 02:54:00 +00:00
hdf - update to jpeg-8 2010-02-05 11:46:55 +00:00
hdf-java Update to 2.7 2011-03-17 17:24:59 +00:00
hdf5 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
hdf5-18 - Update to 1.8.6 2011-03-12 10:07:53 +00:00
hs-bio - Add DIST_SUBDIR for Haskell Cabal ports (with default of "cabal") 2010-08-08 08:49:38 +00:00
ics - Fix build with new tix 2010-12-06 21:05:20 +00:00
InsightToolkit
isaac-cfd
jmol - Update to 11.8.24 2010-06-03 08:22:14 +00:00
jstrack - Update from 3.0.3 to 3.1.0. 2010-07-27 15:07:33 +00:00
kmovisto - update to 1.4.1 2010-03-28 06:47:48 +00:00
kst - Bump PORTREVISION to chase the update of astro/cfitsio 2011-01-05 06:58:15 +00:00
kst2 - Bump PORTREVISION to chase the update of astro/cfitsio 2011-01-05 06:58:15 +00:00
lamprop
libctl Apparently builds on amd64, but not i386 (an unusual case). 2011-03-11 21:27:31 +00:00
libghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libint
libkml libkml is a library for use with applications that want to 2009-10-07 11:10:21 +00:00
liblinear - Update to 1.7 2010-09-13 14:02:28 +00:00
liboglappth - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libquantum Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
libsvm - Use INSTALL_LIB when installing shared lib and create symlink so configure 2010-11-10 14:06:44 +00:00
libsvm-python Update to 2.91 which includes a new rewritten Python interface 2010-04-05 10:24:25 +00:00
linsmith Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
massxpert - Fix mans 2010-05-27 06:07:41 +00:00
mayavi - Fix Coredump 2011-03-18 09:59:55 +00:00
mbdyn - Chase ginac shlib bump 2011-03-04 14:08:57 +00:00
mcstas - Update to 1.12b 2010-08-22 03:31:54 +00:00
medit Upgrade to 2011.03.06. 2011-03-07 20:59:00 +00:00
meep Clean up "current" versions of autotools components to further reduce 2010-12-08 19:58:49 +00:00
minc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
minc2 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
mol2ps - Welcome to fpc 2.4.2 2010-11-15 22:50:44 +00:00
mpb - Bump PORTREVISION to chase the update of libctl 2010-01-24 02:14:17 +00:00
mpqc Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
mpqc-mpich
ncs Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
netcdf - Use LOCAL/sunpoet as backup MASTER_SITES 2010-10-01 01:14:18 +00:00
netcdf-ftn - Update MAINTAINER to my FreeBSD.org address 2010-09-22 17:10:26 +00:00
netcdf3-ftn - Update MAINTAINER to my FreeBSD.org address 2010-09-22 17:10:26 +00:00
netcdf4 - Use LOCAL/sunpoet as backup MASTER_SITES 2010-10-01 01:14:18 +00:00
nifticlib
oases Deprecate unmaintained ports from science where upstream disapear and/or 2011-03-13 21:47:45 +00:00
omnetpp - update to 1.4.1 2010-03-28 06:47:48 +00:00
openbabel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
ovt - update to 1.4.1 2010-03-28 06:47:48 +00:00
p5-Algorithm-SVMLight - only 13% of the p5- ports embed @comment $FreeBSD$: 2010-09-24 02:03:44 +00:00
p5-Chemistry-3DBuilder - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Bond-Find - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Canonicalize - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-Mopac - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-SMARTS - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-SMILES - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-VRML - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-XYZ - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-FormulaPattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-InternalCoords - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Isotope - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Mok - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Reaction - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Ring - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Geo-BUFR BUFR = Binary Universal Form for the Representation of meteorological data. 2011-03-10 06:15:55 +00:00
p5-Geo-Coordinates-Converter - Update to 0.10 2011-02-14 03:04:29 +00:00
p5-Geo-ReadGRIB - Update to 1.21 2009-11-22 03:15:14 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.006 2010-07-04 02:35:49 +00:00
p5-PerlMol - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Physics-Unit Update my MAINTAINER address to culot@FreeBSD.org. 2010-10-20 05:53:20 +00:00
paje LICENSE LGPL21 2010-06-05 06:14:28 +00:00
paraview - Update to 3.8.1. 2010-12-17 15:42:56 +00:00
pcp - Mark ports that have been broken for six month or more, or never compiled on 2011-03-17 11:08:44 +00:00
peekabot Return these ports to the pool. 2011-03-02 23:59:52 +00:00
pnetcdf Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
psi3 Build fix with gotoblas. 2010-02-16 07:23:49 +00:00
psychopy - Update to 1.63.03 2011-03-01 09:38:21 +00:00
py-biolccc Update to 1.3.0 2011-03-10 17:01:09 +00:00
py-DendroPy - Update to 3.7.1 2010-10-21 01:45:15 +00:00
py-h5py - Add py-numpy into RUN_DEPENDS 2010-02-01 11:27:58 +00:00
py-hcluster - update to 1.4.1 2010-03-28 06:47:48 +00:00
py-mdp - Move to py25 or above 2011-02-25 00:47:51 +00:00
py-mlpy - Update to 2.2.2 2010-12-23 08:22:39 +00:00
py-netCDF4 - Update to 0.9.3 2010-10-29 01:41:56 +00:00
py-obspy-core The obspy.core package contains common methods and classes 2011-03-16 08:46:36 +00:00
py-obspy.gse2 - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.mseed - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.signal - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-openbabel Update to 2.2.3 2010-06-26 19:17:44 +00:00
py-paida - Get rip python 2.3+ 2009-12-13 17:00:14 +00:00
py-pydicom - Update to 0.9.4.1 2010-06-25 02:39:08 +00:00
py-scimath - Fix fetch 2011-02-22 01:15:35 +00:00
py-scipy - Move to py25 or above 2011-02-25 00:47:51 +00:00
pybrain PyBrain is a modular Machine Learning Library for Python. 2009-11-19 13:44:38 +00:00
pycdf
pynn PyNN(pronounced 'pine') is a simulator-independent language for 2010-05-19 05:31:44 +00:00
pyvox
qcl
qtresistors - update to 1.4.1 2010-03-28 06:47:48 +00:00
R-cran-AMORE R-cran-AMORE was born to release the TAO robust neural network algorithm 2011-03-07 10:57:09 +00:00
R-cran-bayesm bayesm covers many important models used in marketing and micro-econometrics 2011-03-07 12:04:35 +00:00
ruby-dcl - update to 1.4.1 2010-03-28 06:47:48 +00:00
ruby-gphys - Update to 1.0.0 2010-04-28 06:00:33 +00:00
ruby-netcdf - Update to 0.6.5 2011-02-20 11:31:04 +00:00
silo Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
simlib Not for powerpc, either. 2010-04-01 10:24:44 +00:00
svmlight
szip Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
udunits - Update to 2.1.21 2011-02-04 19:46:12 +00:00
v_sim Fix build with gcc-4.5.2.20101118. 2010-11-25 17:54:06 +00:00
veusz - Move to py25 or above 2011-02-25 00:47:51 +00:00
vis5d+ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
vmd - Add files/patch-bin_vmd.csh, files/patch-bin_vmd.sh 2010-12-18 09:24:21 +00:00
x11iraf
xmakemol For ports maintained by ports@FreeBSD.org, remove names and/or 2009-12-21 02:19:12 +00:00
xmds Purge 3 outdated, old-and-busted, versions of automake as part of 2010-09-23 00:40:50 +00:00
Makefile h5utils is a set of utilities for visualization and conversion of 2011-03-18 19:42:35 +00:00