freebsd-ports/biology/abyss/pkg-descr

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ABySS is a de novo, parallel, paired-end sequence assembler that is designed for
short reads. The single-processor version is useful for assembling genomes up to
100 Mbases in size. The parallel version is implemented using MPI and is capable
of assembling larger genomes.
WWW: http://www.bcgsc.ca/platform/bioinfo/software/abyss