37526bbd4e
A big Thank You to the original contributors of these ports: * Aaron Dalton <aaron@FreeBSD.org> * Akinori MUSHA aka knu <knu@idaemons.org> * Andrey Zakhvatov * Bob Zimmermann <rpz@cse.wustl.edu> * Camson Huynh <chuynh@biolateral.com.au> * Dan Siercks <dsiercks@uwm.edu> * Fernan Aguero <fernan@iib.unsam.edu.ar> * Hannes Hauswedell <h2+fbsdports@fsfe.org> * J. Bacon <jwb@FreeBSD.org> * Jason Bacon <jwb@FreeBSD.org> * Jeremy <karlj000@unbc.ca> * Johann Visagie <johann@egenetics.com> * Johann Visagie <wjv@FreeBSD.org> * Mauricio Herrera Cuadra <mauricio@arareko.net> * Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp> * Motomichi Matsuzaki <mzaki@e-mail.ne.jp> * Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> * Motomichi Matsuzaki <mzaki@niid.go.jp> * Po-Chuan Hsieh <sunpoet@FreeBSD.org> * Razi Khaja <razi@genet.sickkids.on.ca> * Reed A. Cartwright <cartwright@asu.edu> * Ryo MIYAMOTO * Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> * Sangwoo Shim <sangwoos@gmail.com> * Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> * Tassilo Philipp <tphilipp@potion-studios.com> * Tony Maher * Tony Maher <tonym@biolateral.com.au> * Wen Heping <wen@FreeBSD.org> * Wen Heping <wenheping@gmail.com> * Yonatan <onatan@gmail.com> * Yuri Victorovich <yuri@rawbw.com> * ballen * barnhart@genetics.wustl.edu * camson@bilateral.com.au * chuynh@biolateral.com.au * dbader@eece.unm.edu * frankch@waru.life.nthu.edu.tw * h2 * lentferj * maho@FreeBSD.org * mzaki@biol.s.u-tokyo.ac.jp * tonym * wen@FreeBSD.org With hat: portmgr
63 lines
1.7 KiB
Makefile
63 lines
1.7 KiB
Makefile
PORTNAME= emboss
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PORTVERSION= 6.6.0
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PORTREVISION= 6
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CATEGORIES= biology
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MASTER_SITES= ftp://emboss.open-bio.org/pub/EMBOSS/
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DISTNAME= ${PORTNAME:tu}-${PORTVERSION}
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DIST_SUBDIR= ${PORTNAME}
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MAINTAINER= wen@FreeBSD.org
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COMMENT= Collection of open source tools for genetic sequence analysis
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LICENSE= GPLv2
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BUILD_DEPENDS= clustalw:biology/clustalw \
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primer3:biology/primer3
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LIB_DEPENDS= libgd.so:graphics/gd \
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libpng.so:graphics/png
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USES= gmake libtool iconv mysql pgsql ssl
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USE_SUBMAKE= yes
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CONFLICTS= qmail-ldap digest
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PREFIX?= ${LOCALBASE}/emboss
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NO_MTREE= yes
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GNU_CONFIGURE= yes
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USE_LDCONFIG= yes
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SUB_FILES= pkg-message emboss-shell
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SUB_LIST= PREFIX=${PREFIX} DATADIR=${DATADIR}
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LDFLAGS+= -L${LOCALBASE}/lib
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CONFIGURE_ARGS+=${ICONV_CONFIGURE_ARG}
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INSTALL_TARGET= install-strip
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DOCSDIR= ${PREFIX}/share/${PORTNAME:tu}/doc
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DATADIR= ${PREFIX}/share/${PORTNAME:tu}
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OPTIONS_DEFINE= DOCS X11
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OPTIONS_DEFAULT= X11
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DOCS_CONFIGURE_ON= --with-docroot=${DOCSDIR}
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X11_USES= motif xorg
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X11_USE= XORG=x11
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X11_LIB_DEPENDS= libgd.so:graphics/gd \
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libpng.so:graphics/png
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X11_CONFIGURE_OFF= --without-x
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CONFIG_FILE= ${WRKSRC}/emboss/emboss.default.template
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post-patch:
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@${REINPLACE_CMD} -e 's/-liconv/${ICONV_LIB}/' ${WRKSRC}/configure
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post-build:
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${CC} -DEMBOSS_PREFIX="\"${PREFIX}\"" ${FILESDIR}/emboss.c -o ${WRKDIR}/emboss
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pre-install:
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@ ${REINPLACE_CMD} -e 's#%%DATADIR%%#${PREFIX}/share/${PORTNAME:tu}#' ${CONFIG_FILE}
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post-install:
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@${MKDIR} ${STAGEDIR}${LOCALBASE}/bin
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${INSTALL_SCRIPT} ${WRKDIR}/emboss-shell ${STAGEDIR}${LOCALBASE}/bin
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${INSTALL_DATA} ${CONFIG_FILE} ${STAGEDIR}${DATADIR}
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${INSTALL_PROGRAM} ${WRKDIR}/emboss ${STAGEDIR}${LOCALBASE}/bin
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.include <bsd.port.mk>
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