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Salmon is a wicked-fast program to produce a highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves is accuracy and speed via a number of different innovations, including the use of quasi-mapping (accurate but fast-to-compute proxies for traditional read alignments), and massively-parallel stochastic collapsed variational inference. The result is a versatile tool that fits nicely into many differnt pipelines.
7 lines
452 B
Text
7 lines
452 B
Text
Salmon is a wicked-fast program to produce a highly-accurate,
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transcript-level quantification estimates from RNA-seq data. Salmon
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achieves is accuracy and speed via a number of different innovations,
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including the use of quasi-mapping (accurate but fast-to-compute
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proxies for traditional read alignments), and massively-parallel
|
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stochastic collapsed variational inference. The result is a versatile
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tool that fits nicely into many differnt pipelines.
|